RNA–Protein interactions for RNA: ENST00000392041.8

ZNF140-204, Transcript of zinc finger protein 140, humanhuman

TSL 4

Gene ZNF140, Length 529 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140-204ENST00000392041 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
ZNF140-204ENST00000392041 ABCC9O60706 1549 aa19.17■□□□□ 0.66
ZNF140-204ENST00000392041 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
ZNF140-204ENST00000392041 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
ZNF140-204ENST00000392041 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
ZNF140-204ENST00000392041 DCAF8L2P0C7V8 631 aa17.97■□□□□ 0.47
ZNF140-204ENST00000392041 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
ZNF140-204ENST00000392041 NACADO15069 1562 aa17.72■□□□□ 0.43
ZNF140-204ENST00000392041 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
ZNF140-204ENST00000392041 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
ZNF140-204ENST00000392041 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
ZNF140-204ENST00000392041 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
ZNF140-204ENST00000392041 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
ZNF140-204ENST00000392041 SCRIBQ14160 1630 aa17.15■□□□□ 0.34
ZNF140-204ENST00000392041 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
ZNF140-204ENST00000392041 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
ZNF140-204ENST00000392041 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
ZNF140-204ENST00000392041 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
ZNF140-204ENST00000392041 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
ZNF140-204ENST00000392041 ERCC6Q03468 1493 aa16.58■□□□□ 0.24
ZNF140-204ENST00000392041 CUX2O14529 1486 aa16.49■□□□□ 0.23
ZNF140-204ENST00000392041 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
ZNF140-204ENST00000392041 NESP48681 1621 aa16.36■□□□□ 0.21
ZNF140-204ENST00000392041 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
ZNF140-204ENST00000392041 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
ZNF140-204ENST00000392041 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
ZNF140-204ENST00000392041 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
ZNF140-204ENST00000392041 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
ZNF140-204ENST00000392041 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
ZNF140-204ENST00000392041 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
ZNF140-204ENST00000392041 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
ZNF140-204ENST00000392041 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
ZNF140-204ENST00000392041 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
ZNF140-204ENST00000392041 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
ZNF140-204ENST00000392041 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
ZNF140-204ENST00000392041 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
ZNF140-204ENST00000392041 CADPSQ9ULU8 1353 aa15.92■□□□□ 0.14
ZNF140-204ENST00000392041 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
ZNF140-204ENST00000392041 WDR62O43379 1518 aa15.83■□□□□ 0.12
ZNF140-204ENST00000392041 WIZO95785 1651 aa15.83■□□□□ 0.12
ZNF140-204ENST00000392041 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
ZNF140-204ENST00000392041 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
ZNF140-204ENST00000392041 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
ZNF140-204ENST00000392041 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
ZNF140-204ENST00000392041 CFTRP13569 1480 aa15.63■□□□□ 0.09
ZNF140-204ENST00000392041 RIMBP3CA6NJZ7 1639 aa15.6■□□□□ 0.09
ZNF140-204ENST00000392041 RIMBP3BA6NNM3 1639 aa15.6■□□□□ 0.09
ZNF140-204ENST00000392041 RIMBP3Q9UFD9 1639 aa15.6■□□□□ 0.09
ZNF140-204ENST00000392041 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
ZNF140-204ENST00000392041 CYB5RLQ6IPT4 315 aa15.57■□□□□ 0.08
ZNF140-204ENST00000392041 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
ZNF140-204ENST00000392041 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
ZNF140-204ENST00000392041 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
ZNF140-204ENST00000392041 FBLN2P98095 1184 aa15.52■□□□□ 0.08
ZNF140-204ENST00000392041 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
ZNF140-204ENST00000392041 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
ZNF140-204ENST00000392041 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
ZNF140-204ENST00000392041 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
ZNF140-204ENST00000392041 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.066e-7■■□□□ 11.9
ZNF140-204ENST00000392041 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
ZNF140-204ENST00000392041 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
ZNF140-204ENST00000392041 CHD1O14646 1710 aa15.36■□□□□ 0.05
ZNF140-204ENST00000392041 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
ZNF140-204ENST00000392041 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
ZNF140-204ENST00000392041 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
ZNF140-204ENST00000392041 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
ZNF140-204ENST00000392041 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
ZNF140-204ENST00000392041 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
ZNF140-204ENST00000392041 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
ZNF140-204ENST00000392041 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
ZNF140-204ENST00000392041 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
ZNF140-204ENST00000392041 SOGA1O94964 1423 aa15.22■□□□□ 0.03
ZNF140-204ENST00000392041 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
ZNF140-204ENST00000392041 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
ZNF140-204ENST00000392041 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
ZNF140-204ENST00000392041 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
ZNF140-204ENST00000392041 GRIN2BQ13224 1484 aa15.07■□□□□ 0
ZNF140-204ENST00000392041 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
ZNF140-204ENST00000392041 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
ZNF140-204ENST00000392041 CUX1P39880 1505 aa15.04■□□□□ -0
ZNF140-204ENST00000392041 SYNJ2O15056 1496 aa15.04■□□□□ -0
ZNF140-204ENST00000392041 PBRM1Q86U86 1689 aa14.99□□□□□ -0.01
ZNF140-204ENST00000392041 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
ZNF140-204ENST00000392041 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
ZNF140-204ENST00000392041 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
ZNF140-204ENST00000392041 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
ZNF140-204ENST00000392041 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
ZNF140-204ENST00000392041 ABCA5Q8WWZ7 1642 aa14.86□□□□□ -0.03
ZNF140-204ENST00000392041 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
ZNF140-204ENST00000392041 FAM69CQ0P6D2 419 aa14.81□□□□□ -0.04
ZNF140-204ENST00000392041 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
ZNF140-204ENST00000392041 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
ZNF140-204ENST00000392041 ADAMTS12P58397 1594 aa14.8□□□□□ -0.04
ZNF140-204ENST00000392041 PRG4Q92954 1404 aaPredicted RBP14.79□□□□□ -0.04
ZNF140-204ENST00000392041 NUP160Q12769 1436 aa14.78□□□□□ -0.04
ZNF140-204ENST00000392041 FHAD1B1AJZ9 1412 aa14.77□□□□□ -0.04
ZNF140-204ENST00000392041 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
ZNF140-204ENST00000392041 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
ZNF140-204ENST00000392041 KIF13AQ9H1H9 1805 aa14.75□□□□□ -0.05
ZNF140-204ENST00000392041 SHROOM2Q13796 1616 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms