RNA–Protein interactions for RNA: ENST00000391936.6

LEMD1-206, Transcript of LEM domain containing 1, humanhuman

TSL 5 BASIC

Gene LEMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-206ENST00000391936 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
LEMD1-206ENST00000391936 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
LEMD1-206ENST00000391936 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
LEMD1-206ENST00000391936 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
LEMD1-206ENST00000391936 ABCC9O60706 1549 aa17.52■□□□□ 0.4
LEMD1-206ENST00000391936 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
LEMD1-206ENST00000391936 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
LEMD1-206ENST00000391936 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
LEMD1-206ENST00000391936 NACADO15069 1562 aa16.85■□□□□ 0.29
LEMD1-206ENST00000391936 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
LEMD1-206ENST00000391936 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
LEMD1-206ENST00000391936 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
LEMD1-206ENST00000391936 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
LEMD1-206ENST00000391936 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
LEMD1-206ENST00000391936 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
LEMD1-206ENST00000391936 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
LEMD1-206ENST00000391936 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
LEMD1-206ENST00000391936 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
LEMD1-206ENST00000391936 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
LEMD1-206ENST00000391936 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
LEMD1-206ENST00000391936 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
LEMD1-206ENST00000391936 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
LEMD1-206ENST00000391936 FOXD1Q16676 465 aa15.83■□□□□ 0.12
LEMD1-206ENST00000391936 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.08
LEMD1-206ENST00000391936 SMARCA4P51532 1647 aa15.53■□□□□ 0.08
LEMD1-206ENST00000391936 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
LEMD1-206ENST00000391936 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
LEMD1-206ENST00000391936 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
LEMD1-206ENST00000391936 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
LEMD1-206ENST00000391936 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
LEMD1-206ENST00000391936 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
LEMD1-206ENST00000391936 DNAJC5Q9H3Z4 198 aa15.37■□□□□ 0.05
LEMD1-206ENST00000391936 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
LEMD1-206ENST00000391936 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
LEMD1-206ENST00000391936 CUX2O14529 1486 aa15.24■□□□□ 0.03
LEMD1-206ENST00000391936 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
LEMD1-206ENST00000391936 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
LEMD1-206ENST00000391936 WIZO95785 1651 aa15.16■□□□□ 0.02
LEMD1-206ENST00000391936 NESP48681 1621 aa15.07■□□□□ 0
LEMD1-206ENST00000391936 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
LEMD1-206ENST00000391936 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
LEMD1-206ENST00000391936 TOP2AP11388 1531 aaKnown RBP15.02■□□□□ -0
LEMD1-206ENST00000391936 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
LEMD1-206ENST00000391936 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
LEMD1-206ENST00000391936 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
LEMD1-206ENST00000391936 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
LEMD1-206ENST00000391936 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
LEMD1-206ENST00000391936 ADRA2BP18089 450 aa14.94□□□□□ -0.02
LEMD1-206ENST00000391936 PPP6R1Q9UPN7 881 aa14.91□□□□□ -0.02
LEMD1-206ENST00000391936 CFTRP13569 1480 aa14.9□□□□□ -0.02
LEMD1-206ENST00000391936 MSH5O43196 834 aa14.87□□□□□ -0.03
LEMD1-206ENST00000391936 WDR62O43379 1518 aa14.87□□□□□ -0.03
LEMD1-206ENST00000391936 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
LEMD1-206ENST00000391936 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
LEMD1-206ENST00000391936 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
LEMD1-206ENST00000391936 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
LEMD1-206ENST00000391936 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
LEMD1-206ENST00000391936 TRIM41Q8WV44 630 aa14.66□□□□□ -0.06
LEMD1-206ENST00000391936 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
LEMD1-206ENST00000391936 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
LEMD1-206ENST00000391936 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
LEMD1-206ENST00000391936 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
LEMD1-206ENST00000391936 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
LEMD1-206ENST00000391936 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
LEMD1-206ENST00000391936 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
LEMD1-206ENST00000391936 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
LEMD1-206ENST00000391936 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
LEMD1-206ENST00000391936 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
LEMD1-206ENST00000391936 CUX1P39880 1505 aa14.38□□□□□ -0.11
LEMD1-206ENST00000391936 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
LEMD1-206ENST00000391936 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
LEMD1-206ENST00000391936 SOGA1O94964 1423 aa14.33□□□□□ -0.11
LEMD1-206ENST00000391936 CHD1O14646 1710 aa14.32□□□□□ -0.12
LEMD1-206ENST00000391936 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
LEMD1-206ENST00000391936 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
LEMD1-206ENST00000391936 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
LEMD1-206ENST00000391936 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
LEMD1-206ENST00000391936 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
LEMD1-206ENST00000391936 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
LEMD1-206ENST00000391936 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
LEMD1-206ENST00000391936 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
LEMD1-206ENST00000391936 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
LEMD1-206ENST00000391936 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
LEMD1-206ENST00000391936 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
LEMD1-206ENST00000391936 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
LEMD1-206ENST00000391936 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
LEMD1-206ENST00000391936 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
LEMD1-206ENST00000391936 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
LEMD1-206ENST00000391936 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.13
LEMD1-206ENST00000391936 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
LEMD1-206ENST00000391936 FBLN2P98095 1184 aa14.2□□□□□ -0.14
LEMD1-206ENST00000391936 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
LEMD1-206ENST00000391936 CYB5RLQ6IPT4 315 aa14.19□□□□□ -0.14
LEMD1-206ENST00000391936 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
LEMD1-206ENST00000391936 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
LEMD1-206ENST00000391936 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
LEMD1-206ENST00000391936 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
LEMD1-206ENST00000391936 ADAMTS12P58397 1594 aa14.11□□□□□ -0.15
LEMD1-206ENST00000391936 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
LEMD1-206ENST00000391936 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms