RNA–Protein interactions for RNA: ENST00000391836.3

SMYD3-203, Transcript of SET and MYND domain containing 3, humanhuman

TSL 5

Gene SMYD3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-203ENST00000391836 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
SMYD3-203ENST00000391836 ABCC9O60706 1549 aa27.38■■□□□ 1.97
SMYD3-203ENST00000391836 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
SMYD3-203ENST00000391836 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
SMYD3-203ENST00000391836 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
SMYD3-203ENST00000391836 NACADO15069 1562 aa25.48■■□□□ 1.67
SMYD3-203ENST00000391836 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
SMYD3-203ENST00000391836 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
SMYD3-203ENST00000391836 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
SMYD3-203ENST00000391836 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
SMYD3-203ENST00000391836 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
SMYD3-203ENST00000391836 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
SMYD3-203ENST00000391836 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
SMYD3-203ENST00000391836 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.55
SMYD3-203ENST00000391836 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
SMYD3-203ENST00000391836 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
SMYD3-203ENST00000391836 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
SMYD3-203ENST00000391836 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
SMYD3-203ENST00000391836 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
SMYD3-203ENST00000391836 CUX2O14529 1486 aa23.87■■□□□ 1.41
SMYD3-203ENST00000391836 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
SMYD3-203ENST00000391836 NCAPD3P42695 1498 aa23.5■■□□□ 1.35
SMYD3-203ENST00000391836 NESP48681 1621 aa23.36■■□□□ 1.33
SMYD3-203ENST00000391836 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
SMYD3-203ENST00000391836 HMGXB3Q12766 1538 aa23.32■■□□□ 1.32
SMYD3-203ENST00000391836 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
SMYD3-203ENST00000391836 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
SMYD3-203ENST00000391836 SMARCA4P51532 1647 aa23.21■■□□□ 1.31
SMYD3-203ENST00000391836 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
SMYD3-203ENST00000391836 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
SMYD3-203ENST00000391836 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
SMYD3-203ENST00000391836 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
SMYD3-203ENST00000391836 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
SMYD3-203ENST00000391836 BAZ1AQ9NRL2 1556 aaPredicted RBP22.98■■□□□ 1.27
SMYD3-203ENST00000391836 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
SMYD3-203ENST00000391836 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
SMYD3-203ENST00000391836 WDR62O43379 1518 aa22.82■■□□□ 1.24
SMYD3-203ENST00000391836 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
SMYD3-203ENST00000391836 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
SMYD3-203ENST00000391836 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
SMYD3-203ENST00000391836 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
SMYD3-203ENST00000391836 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
SMYD3-203ENST00000391836 RIMBP3CA6NJZ7 1639 aa22.48■■□□□ 1.19
SMYD3-203ENST00000391836 RIMBP3BA6NNM3 1639 aa22.48■■□□□ 1.19
SMYD3-203ENST00000391836 RIMBP3Q9UFD9 1639 aa22.48■■□□□ 1.19
SMYD3-203ENST00000391836 WIZO95785 1651 aa22.47■■□□□ 1.19
SMYD3-203ENST00000391836 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
SMYD3-203ENST00000391836 CFTRP13569 1480 aa22.38■■□□□ 1.17
SMYD3-203ENST00000391836 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
SMYD3-203ENST00000391836 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
SMYD3-203ENST00000391836 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
SMYD3-203ENST00000391836 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
SMYD3-203ENST00000391836 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
SMYD3-203ENST00000391836 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
SMYD3-203ENST00000391836 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
SMYD3-203ENST00000391836 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
SMYD3-203ENST00000391836 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
SMYD3-203ENST00000391836 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
SMYD3-203ENST00000391836 CHD1O14646 1710 aa22.06■■□□□ 1.12
SMYD3-203ENST00000391836 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
SMYD3-203ENST00000391836 TOPBP1Q92547 1522 aa22.02■■□□□ 1.12
SMYD3-203ENST00000391836 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
SMYD3-203ENST00000391836 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
SMYD3-203ENST00000391836 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
SMYD3-203ENST00000391836 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.12e-7■■■■□ 26.1
SMYD3-203ENST00000391836 CCDC88BA6NC98 1476 aa21.87■■□□□ 1.09
SMYD3-203ENST00000391836 FBLN2P98095 1184 aa21.84■■□□□ 1.09
SMYD3-203ENST00000391836 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
SMYD3-203ENST00000391836 POLA1P09884 1462 aaPredicted RBP21.76■■□□□ 1.07
SMYD3-203ENST00000391836 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
SMYD3-203ENST00000391836 RAD54L2Q9Y4B4 1467 aa21.68■■□□□ 1.06
SMYD3-203ENST00000391836 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
SMYD3-203ENST00000391836 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
SMYD3-203ENST00000391836 WDR97A6NE52 1622 aa21.64■■□□□ 1.05
SMYD3-203ENST00000391836 SOGA1O94964 1423 aa21.61■■□□□ 1.05
SMYD3-203ENST00000391836 MAGI1Q96QZ7 1491 aaPredicted RBP21.6■■□□□ 1.05
SMYD3-203ENST00000391836 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
SMYD3-203ENST00000391836 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
SMYD3-203ENST00000391836 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
SMYD3-203ENST00000391836 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
SMYD3-203ENST00000391836 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
SMYD3-203ENST00000391836 PBRM1Q86U86 1689 aa21.46■■□□□ 1.03
SMYD3-203ENST00000391836 CUX1P39880 1505 aa21.43■■□□□ 1.02
SMYD3-203ENST00000391836 ERCC6L2Q5T890 1561 aa21.37■■□□□ 1.01
SMYD3-203ENST00000391836 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
SMYD3-203ENST00000391836 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
SMYD3-203ENST00000391836 KIF13AQ9H1H9 1805 aa21.3■■□□□ 1
SMYD3-203ENST00000391836 CEP170Q5SW79 1584 aa21.28■■□□□ 1
SMYD3-203ENST00000391836 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
SMYD3-203ENST00000391836 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
SMYD3-203ENST00000391836 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
SMYD3-203ENST00000391836 NUP160Q12769 1436 aa21.21■□□□□ 0.99
SMYD3-203ENST00000391836 ADAMTS12P58397 1594 aa21.21■□□□□ 0.99
SMYD3-203ENST00000391836 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
SMYD3-203ENST00000391836 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
SMYD3-203ENST00000391836 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
SMYD3-203ENST00000391836 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
SMYD3-203ENST00000391836 ILDR1Q86SU0 546 aaPredicted RBP21.03■□□□□ 0.96
SMYD3-203ENST00000391836 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.965e-6■■■■■ 29.2
SMYD3-203ENST00000391836 KDM4FA0A1W2PPD8 638 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms