RNA–Protein interactions for RNA: ENST00000391065.2

U3.49-201, humanhuman

BASIC

Gene U3, Length 214 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.49-201ENST00000391065 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
U3.49-201ENST00000391065 ABCC9O60706 1549 aa26.59■■□□□ 1.85
U3.49-201ENST00000391065 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
U3.49-201ENST00000391065 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
U3.49-201ENST00000391065 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
U3.49-201ENST00000391065 NACADO15069 1562 aa25.03■■□□□ 1.6
U3.49-201ENST00000391065 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
U3.49-201ENST00000391065 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
U3.49-201ENST00000391065 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
U3.49-201ENST00000391065 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
U3.49-201ENST00000391065 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
U3.49-201ENST00000391065 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
U3.49-201ENST00000391065 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
U3.49-201ENST00000391065 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.46
U3.49-201ENST00000391065 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
U3.49-201ENST00000391065 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
U3.49-201ENST00000391065 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
U3.49-201ENST00000391065 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
U3.49-201ENST00000391065 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
U3.49-201ENST00000391065 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
U3.49-201ENST00000391065 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
U3.49-201ENST00000391065 CUX2O14529 1486 aa22.96■■□□□ 1.27
U3.49-201ENST00000391065 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
U3.49-201ENST00000391065 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
U3.49-201ENST00000391065 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
U3.49-201ENST00000391065 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
U3.49-201ENST00000391065 NESP48681 1621 aa22.82■■□□□ 1.24
U3.49-201ENST00000391065 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
U3.49-201ENST00000391065 BAZ1BQ9UIG0 1483 aaKnown RBP22.78■■□□□ 1.24
U3.49-201ENST00000391065 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
U3.49-201ENST00000391065 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
U3.49-201ENST00000391065 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
U3.49-201ENST00000391065 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
U3.49-201ENST00000391065 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
U3.49-201ENST00000391065 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
U3.49-201ENST00000391065 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
U3.49-201ENST00000391065 WIZO95785 1651 aa22.36■■□□□ 1.17
U3.49-201ENST00000391065 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
U3.49-201ENST00000391065 WDR62O43379 1518 aa22.24■■□□□ 1.15
U3.49-201ENST00000391065 RSF1Q96T23 1441 aaPredicted RBP22.2■■□□□ 1.14
U3.49-201ENST00000391065 CFTRP13569 1480 aa22.16■■□□□ 1.14
U3.49-201ENST00000391065 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
U3.49-201ENST00000391065 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
U3.49-201ENST00000391065 TOP2AP11388 1531 aaKnown RBP22.07■■□□□ 1.12
U3.49-201ENST00000391065 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
U3.49-201ENST00000391065 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
U3.49-201ENST00000391065 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
U3.49-201ENST00000391065 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
U3.49-201ENST00000391065 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
U3.49-201ENST00000391065 ZNF608Q9ULD9 1512 aaPredicted RBP21.76■■□□□ 1.07
U3.49-201ENST00000391065 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
U3.49-201ENST00000391065 TOPBP1Q92547 1522 aa21.73■■□□□ 1.07
U3.49-201ENST00000391065 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
U3.49-201ENST00000391065 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
U3.49-201ENST00000391065 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
U3.49-201ENST00000391065 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
U3.49-201ENST00000391065 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
U3.49-201ENST00000391065 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.04
U3.49-201ENST00000391065 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
U3.49-201ENST00000391065 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
U3.49-201ENST00000391065 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
U3.49-201ENST00000391065 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
U3.49-201ENST00000391065 CYB5RLQ6IPT4 315 aa21.45■■□□□ 1.02
U3.49-201ENST00000391065 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
U3.49-201ENST00000391065 SOGA1O94964 1423 aa21.42■■□□□ 1.02
U3.49-201ENST00000391065 FBLN2P98095 1184 aa21.42■■□□□ 1.02
U3.49-201ENST00000391065 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
U3.49-201ENST00000391065 CHD1O14646 1710 aa21.41■■□□□ 1.02
U3.49-201ENST00000391065 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
U3.49-201ENST00000391065 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
U3.49-201ENST00000391065 CUX1P39880 1505 aa21.31■■□□□ 1
U3.49-201ENST00000391065 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
U3.49-201ENST00000391065 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
U3.49-201ENST00000391065 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
U3.49-201ENST00000391065 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
U3.49-201ENST00000391065 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
U3.49-201ENST00000391065 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
U3.49-201ENST00000391065 TRHP20396 242 aaPredicted RBP21.21■□□□□ 0.99
U3.49-201ENST00000391065 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
U3.49-201ENST00000391065 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
U3.49-201ENST00000391065 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
U3.49-201ENST00000391065 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
U3.49-201ENST00000391065 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
U3.49-201ENST00000391065 PBRM1Q86U86 1689 aa21.04■□□□□ 0.96
U3.49-201ENST00000391065 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
U3.49-201ENST00000391065 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
U3.49-201ENST00000391065 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
U3.49-201ENST00000391065 NUP160Q12769 1436 aa20.91■□□□□ 0.94
U3.49-201ENST00000391065 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
U3.49-201ENST00000391065 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.94
U3.49-201ENST00000391065 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
U3.49-201ENST00000391065 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
U3.49-201ENST00000391065 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
U3.49-201ENST00000391065 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
U3.49-201ENST00000391065 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
U3.49-201ENST00000391065 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
U3.49-201ENST00000391065 JPH4Q96JJ6 628 aa20.73■□□□□ 0.91
U3.49-201ENST00000391065 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
U3.49-201ENST00000391065 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
U3.49-201ENST00000391065 IGF1RP08069 1367 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms