RNA–Protein interactions for RNA: ENST00000390628.3

IGHV1-58-201, Transcript of immunoglobulin heavy variable 1-58, humanhuman

APPRIS P1 BASIC

Gene IGHV1-58, Length 414 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-58-201ENST00000390628 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
IGHV1-58-201ENST00000390628 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
IGHV1-58-201ENST00000390628 ABCC9O60706 1549 aa20.58■□□□□ 0.88
IGHV1-58-201ENST00000390628 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
IGHV1-58-201ENST00000390628 NACADO15069 1562 aa19.6■□□□□ 0.73
IGHV1-58-201ENST00000390628 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
IGHV1-58-201ENST00000390628 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
IGHV1-58-201ENST00000390628 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
IGHV1-58-201ENST00000390628 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
IGHV1-58-201ENST00000390628 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
IGHV1-58-201ENST00000390628 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
IGHV1-58-201ENST00000390628 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
IGHV1-58-201ENST00000390628 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
IGHV1-58-201ENST00000390628 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
IGHV1-58-201ENST00000390628 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
IGHV1-58-201ENST00000390628 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
IGHV1-58-201ENST00000390628 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
IGHV1-58-201ENST00000390628 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
IGHV1-58-201ENST00000390628 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
IGHV1-58-201ENST00000390628 NCAPD3P42695 1498 aa18.05■□□□□ 0.48
IGHV1-58-201ENST00000390628 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
IGHV1-58-201ENST00000390628 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
IGHV1-58-201ENST00000390628 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
IGHV1-58-201ENST00000390628 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
IGHV1-58-201ENST00000390628 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
IGHV1-58-201ENST00000390628 PEG3Q9GZU2 1588 aa17.9■□□□□ 0.46
IGHV1-58-201ENST00000390628 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
IGHV1-58-201ENST00000390628 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
IGHV1-58-201ENST00000390628 NESP48681 1621 aa17.71■□□□□ 0.43
IGHV1-58-201ENST00000390628 WIZO95785 1651 aa17.71■□□□□ 0.42
IGHV1-58-201ENST00000390628 CUX2O14529 1486 aa17.67■□□□□ 0.42
IGHV1-58-201ENST00000390628 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
IGHV1-58-201ENST00000390628 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
IGHV1-58-201ENST00000390628 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
IGHV1-58-201ENST00000390628 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
IGHV1-58-201ENST00000390628 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
IGHV1-58-201ENST00000390628 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
IGHV1-58-201ENST00000390628 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
IGHV1-58-201ENST00000390628 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
IGHV1-58-201ENST00000390628 DNAJC5Q9H3Z4 198 aa17.37■□□□□ 0.37
IGHV1-58-201ENST00000390628 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
IGHV1-58-201ENST00000390628 CFTRP13569 1480 aa17.36■□□□□ 0.37
IGHV1-58-201ENST00000390628 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
IGHV1-58-201ENST00000390628 WDR62O43379 1518 aa17.33■□□□□ 0.37
IGHV1-58-201ENST00000390628 PRDM2Q13029 1718 aa17.29■□□□□ 0.36
IGHV1-58-201ENST00000390628 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
IGHV1-58-201ENST00000390628 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
IGHV1-58-201ENST00000390628 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
IGHV1-58-201ENST00000390628 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
IGHV1-58-201ENST00000390628 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
IGHV1-58-201ENST00000390628 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
IGHV1-58-201ENST00000390628 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
IGHV1-58-201ENST00000390628 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
IGHV1-58-201ENST00000390628 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
IGHV1-58-201ENST00000390628 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
IGHV1-58-201ENST00000390628 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
IGHV1-58-201ENST00000390628 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
IGHV1-58-201ENST00000390628 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
IGHV1-58-201ENST00000390628 CUX1P39880 1505 aa16.8■□□□□ 0.28
IGHV1-58-201ENST00000390628 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
IGHV1-58-201ENST00000390628 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
IGHV1-58-201ENST00000390628 SOGA1O94964 1423 aa16.79■□□□□ 0.28
IGHV1-58-201ENST00000390628 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
IGHV1-58-201ENST00000390628 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
IGHV1-58-201ENST00000390628 CHD1O14646 1710 aa16.73■□□□□ 0.27
IGHV1-58-201ENST00000390628 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
IGHV1-58-201ENST00000390628 FBLN2P98095 1184 aa16.68■□□□□ 0.26
IGHV1-58-201ENST00000390628 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
IGHV1-58-201ENST00000390628 RIMBP3CA6NJZ7 1639 aa16.65■□□□□ 0.26
IGHV1-58-201ENST00000390628 RIMBP3BA6NNM3 1639 aa16.65■□□□□ 0.26
IGHV1-58-201ENST00000390628 RIMBP3Q9UFD9 1639 aa16.65■□□□□ 0.26
IGHV1-58-201ENST00000390628 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
IGHV1-58-201ENST00000390628 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
IGHV1-58-201ENST00000390628 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
IGHV1-58-201ENST00000390628 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
IGHV1-58-201ENST00000390628 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
IGHV1-58-201ENST00000390628 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
IGHV1-58-201ENST00000390628 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
IGHV1-58-201ENST00000390628 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
IGHV1-58-201ENST00000390628 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
IGHV1-58-201ENST00000390628 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
IGHV1-58-201ENST00000390628 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
IGHV1-58-201ENST00000390628 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
IGHV1-58-201ENST00000390628 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
IGHV1-58-201ENST00000390628 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
IGHV1-58-201ENST00000390628 CYB5RLQ6IPT4 315 aa16.46■□□□□ 0.23
IGHV1-58-201ENST00000390628 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
IGHV1-58-201ENST00000390628 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
IGHV1-58-201ENST00000390628 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
IGHV1-58-201ENST00000390628 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
IGHV1-58-201ENST00000390628 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
IGHV1-58-201ENST00000390628 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
IGHV1-58-201ENST00000390628 NUP160Q12769 1436 aa16.34■□□□□ 0.21
IGHV1-58-201ENST00000390628 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
IGHV1-58-201ENST00000390628 CUL7Q14999 1698 aa16.27■□□□□ 0.19
IGHV1-58-201ENST00000390628 SHROOM2Q13796 1616 aa16.27■□□□□ 0.19
IGHV1-58-201ENST00000390628 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
IGHV1-58-201ENST00000390628 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
IGHV1-58-201ENST00000390628 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
IGHV1-58-201ENST00000390628 IGF1RP08069 1367 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms