RNA–Protein interactions for RNA: ENST00000390601.3

IGHV3-11-201, Transcript of immunoglobulin heavy variable 3-11 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGHV3-11, Length 473 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-11-201ENST00000390601 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
IGHV3-11-201ENST00000390601 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
IGHV3-11-201ENST00000390601 ABCC9O60706 1549 aa28.08■■■□□ 2.08
IGHV3-11-201ENST00000390601 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
IGHV3-11-201ENST00000390601 NACADO15069 1562 aa26.62■■□□□ 1.85
IGHV3-11-201ENST00000390601 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
IGHV3-11-201ENST00000390601 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
IGHV3-11-201ENST00000390601 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
IGHV3-11-201ENST00000390601 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
IGHV3-11-201ENST00000390601 UNC13AQ9UPW8 1703 aa26.01■■□□□ 1.75
IGHV3-11-201ENST00000390601 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
IGHV3-11-201ENST00000390601 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
IGHV3-11-201ENST00000390601 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
IGHV3-11-201ENST00000390601 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
IGHV3-11-201ENST00000390601 SCRIBQ14160 1630 aa25.53■■□□□ 1.68
IGHV3-11-201ENST00000390601 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
IGHV3-11-201ENST00000390601 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
IGHV3-11-201ENST00000390601 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
IGHV3-11-201ENST00000390601 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
IGHV3-11-201ENST00000390601 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
IGHV3-11-201ENST00000390601 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
IGHV3-11-201ENST00000390601 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
IGHV3-11-201ENST00000390601 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
IGHV3-11-201ENST00000390601 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.49
IGHV3-11-201ENST00000390601 ERCC6Q03468 1493 aa24.32■■□□□ 1.48
IGHV3-11-201ENST00000390601 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
IGHV3-11-201ENST00000390601 CUX2O14529 1486 aa24.27■■□□□ 1.48
IGHV3-11-201ENST00000390601 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
IGHV3-11-201ENST00000390601 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
IGHV3-11-201ENST00000390601 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.44
IGHV3-11-201ENST00000390601 NESP48681 1621 aa24.07■■□□□ 1.44
IGHV3-11-201ENST00000390601 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
IGHV3-11-201ENST00000390601 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
IGHV3-11-201ENST00000390601 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
IGHV3-11-201ENST00000390601 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
IGHV3-11-201ENST00000390601 WIZO95785 1651 aa23.76■■□□□ 1.39
IGHV3-11-201ENST00000390601 KIF21AQ7Z4S6 1674 aa23.74■■□□□ 1.39
IGHV3-11-201ENST00000390601 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
IGHV3-11-201ENST00000390601 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
IGHV3-11-201ENST00000390601 WDR62O43379 1518 aa23.57■■□□□ 1.36
IGHV3-11-201ENST00000390601 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
IGHV3-11-201ENST00000390601 CFTRP13569 1480 aa23.54■■□□□ 1.36
IGHV3-11-201ENST00000390601 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
IGHV3-11-201ENST00000390601 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
IGHV3-11-201ENST00000390601 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
IGHV3-11-201ENST00000390601 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
IGHV3-11-201ENST00000390601 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
IGHV3-11-201ENST00000390601 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
IGHV3-11-201ENST00000390601 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
IGHV3-11-201ENST00000390601 ABCC8Q09428 1581 aa23.14■■□□□ 1.29
IGHV3-11-201ENST00000390601 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
IGHV3-11-201ENST00000390601 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
IGHV3-11-201ENST00000390601 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
IGHV3-11-201ENST00000390601 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
IGHV3-11-201ENST00000390601 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
IGHV3-11-201ENST00000390601 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
IGHV3-11-201ENST00000390601 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
IGHV3-11-201ENST00000390601 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
IGHV3-11-201ENST00000390601 SOGA1O94964 1423 aa22.78■■□□□ 1.24
IGHV3-11-201ENST00000390601 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
IGHV3-11-201ENST00000390601 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
IGHV3-11-201ENST00000390601 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
IGHV3-11-201ENST00000390601 FBLN2P98095 1184 aa22.74■■□□□ 1.23
IGHV3-11-201ENST00000390601 ARHGEF11O15085 1522 aa22.73■■□□□ 1.23
IGHV3-11-201ENST00000390601 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
IGHV3-11-201ENST00000390601 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
IGHV3-11-201ENST00000390601 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
IGHV3-11-201ENST00000390601 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
IGHV3-11-201ENST00000390601 CHD1O14646 1710 aa22.65■■□□□ 1.22
IGHV3-11-201ENST00000390601 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
IGHV3-11-201ENST00000390601 CUX1P39880 1505 aa22.63■■□□□ 1.21
IGHV3-11-201ENST00000390601 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
IGHV3-11-201ENST00000390601 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
IGHV3-11-201ENST00000390601 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
IGHV3-11-201ENST00000390601 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
IGHV3-11-201ENST00000390601 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
IGHV3-11-201ENST00000390601 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
IGHV3-11-201ENST00000390601 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
IGHV3-11-201ENST00000390601 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
IGHV3-11-201ENST00000390601 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
IGHV3-11-201ENST00000390601 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
IGHV3-11-201ENST00000390601 CLASP1Q7Z460 1538 aa22.44■■□□□ 1.18
IGHV3-11-201ENST00000390601 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
IGHV3-11-201ENST00000390601 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
IGHV3-11-201ENST00000390601 PBRM1Q86U86 1689 aa22.37■■□□□ 1.17
IGHV3-11-201ENST00000390601 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
IGHV3-11-201ENST00000390601 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
IGHV3-11-201ENST00000390601 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
IGHV3-11-201ENST00000390601 GRIN2AQ12879 1464 aa22.25■■□□□ 1.15
IGHV3-11-201ENST00000390601 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
IGHV3-11-201ENST00000390601 NUP160Q12769 1436 aa22.19■■□□□ 1.14
IGHV3-11-201ENST00000390601 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
IGHV3-11-201ENST00000390601 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
IGHV3-11-201ENST00000390601 CEP170Q5SW79 1584 aa22.11■■□□□ 1.13
IGHV3-11-201ENST00000390601 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
IGHV3-11-201ENST00000390601 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
IGHV3-11-201ENST00000390601 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
IGHV3-11-201ENST00000390601 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
IGHV3-11-201ENST00000390601 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
IGHV3-11-201ENST00000390601 IGF1RP08069 1367 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms