RNA–Protein interactions for RNA: ENST00000390521.1

TRAJ16-201, Transcript of T cell receptor alpha joining 16, humanhuman

APPRIS P1 BASIC

Gene TRAJ16, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ16-201ENST00000390521 NISCHQ9Y2I1 1504 aa9.28□□□□□ -0.92
TRAJ16-201ENST00000390521 CCDC180Q9P1Z9 1646 aa8.38□□□□□ -1.07
TRAJ16-201ENST00000390521 ABCC9O60706 1549 aa8.03□□□□□ -1.12
TRAJ16-201ENST00000390521 UNC13AQ9UPW8 1703 aa7.86□□□□□ -1.15
TRAJ16-201ENST00000390521 RB1CC1Q8TDY2 1594 aa7.79□□□□□ -1.16
TRAJ16-201ENST00000390521 NACADO15069 1562 aa7.76□□□□□ -1.17
TRAJ16-201ENST00000390521 ZCCHC6Q5VYS8 1495 aaKnown RBP7.74□□□□□ -1.17
TRAJ16-201ENST00000390521 MYO15BQ96JP2 1530 aa7.68□□□□□ -1.18
TRAJ16-201ENST00000390521 DCAF1Q9Y4B6 1507 aa7.68□□□□□ -1.18
TRAJ16-201ENST00000390521 DCAF8L2P0C7V8 631 aa7.64□□□□□ -1.19
TRAJ16-201ENST00000390521 SCRIBQ14160 1630 aa7.59□□□□□ -1.19
TRAJ16-201ENST00000390521 BICRAQ9NZM4 1560 aa7.59□□□□□ -1.2
TRAJ16-201ENST00000390521 PABPN1Q86U42 306 aaKnown RBP eCLIP7.43□□□□□ -1.22
TRAJ16-201ENST00000390521 SHROOM4Q9ULL8 1493 aa7.41□□□□□ -1.22
TRAJ16-201ENST00000390521 CC2D2AQ9P2K1 1620 aa7.34□□□□□ -1.23
TRAJ16-201ENST00000390521 EIF4G1Q04637 1599 aaKnown RBP7.34□□□□□ -1.23
TRAJ16-201ENST00000390521 DNAJC5BQ9UF47 199 aa7.3□□□□□ -1.24
TRAJ16-201ENST00000390521 SMARCA4P51532 1647 aa7.27□□□□□ -1.25
TRAJ16-201ENST00000390521 CECR2Q9BXF3 1484 aa7.22□□□□□ -1.25
TRAJ16-201ENST00000390521 BAZ1AQ9NRL2 1556 aaPredicted RBP7.2□□□□□ -1.26
TRAJ16-201ENST00000390521 WIZO95785 1651 aa7.18□□□□□ -1.26
TRAJ16-201ENST00000390521 MROH2BQ7Z745 1585 aa7.16□□□□□ -1.26
TRAJ16-201ENST00000390521 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
TRAJ16-201ENST00000390521 SMARCA2P51531 1590 aa7.16□□□□□ -1.26
TRAJ16-201ENST00000390521 HMGXB3Q12766 1538 aa7.14□□□□□ -1.27
TRAJ16-201ENST00000390521 ATAD2BQ9ULI0 1458 aa7.12□□□□□ -1.27
TRAJ16-201ENST00000390521 PRDM2Q13029 1718 aa7.12□□□□□ -1.27
TRAJ16-201ENST00000390521 NCAPD3P42695 1498 aa7.09□□□□□ -1.27
TRAJ16-201ENST00000390521 BAZ1BQ9UIG0 1483 aaKnown RBP7.08□□□□□ -1.28
TRAJ16-201ENST00000390521 KIF21AQ7Z4S6 1674 aa7.06□□□□□ -1.28
TRAJ16-201ENST00000390521 RSF1Q96T23 1441 aaPredicted RBP7.03□□□□□ -1.28
TRAJ16-201ENST00000390521 TOP2AP11388 1531 aaKnown RBP7.02□□□□□ -1.29
TRAJ16-201ENST00000390521 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
TRAJ16-201ENST00000390521 NESP48681 1621 aa6.98□□□□□ -1.29
TRAJ16-201ENST00000390521 THOC2Q8NI27 1593 aaKnown RBP6.95□□□□□ -1.3
TRAJ16-201ENST00000390521 CCDC88BA6NC98 1476 aa6.91□□□□□ -1.3
TRAJ16-201ENST00000390521 ERCC6Q03468 1493 aa6.89□□□□□ -1.31
TRAJ16-201ENST00000390521 CFTRP13569 1480 aa6.86□□□□□ -1.31
TRAJ16-201ENST00000390521 CADPSQ9ULU8 1353 aa6.86□□□□□ -1.31
TRAJ16-201ENST00000390521 CEP164Q9UPV0 1460 aa6.84□□□□□ -1.31
TRAJ16-201ENST00000390521 PDS5BQ9NTI5 1447 aa6.84□□□□□ -1.32
TRAJ16-201ENST00000390521 WDR62O43379 1518 aa6.83□□□□□ -1.32
TRAJ16-201ENST00000390521 SUPT5HO00267 1087 aaKnown RBP6.83□□□□□ -1.32
TRAJ16-201ENST00000390521 FANCD2Q9BXW9 1451 aa6.83□□□□□ -1.32
TRAJ16-201ENST00000390521 CUX2O14529 1486 aa6.82□□□□□ -1.32
TRAJ16-201ENST00000390521 MRC2Q9UBG0 1479 aa6.81□□□□□ -1.32
TRAJ16-201ENST00000390521 URB2Q14146 1524 aaKnown RBP6.8□□□□□ -1.32
TRAJ16-201ENST00000390521 DNMBPQ6XZF7 1577 aa6.78□□□□□ -1.32
TRAJ16-201ENST00000390521 WDR97A6NE52 1622 aa6.78□□□□□ -1.32
TRAJ16-201ENST00000390521 BIVM-ERCC5R4GMW8 1640 aa6.76□□□□□ -1.33
TRAJ16-201ENST00000390521 TARBP1Q13395 1621 aaKnown RBP6.76□□□□□ -1.33
TRAJ16-201ENST00000390521 TOPBP1Q92547 1522 aa6.76□□□□□ -1.33
TRAJ16-201ENST00000390521 PBRM1Q86U86 1689 aa6.75□□□□□ -1.33
TRAJ16-201ENST00000390521 CHD1O14646 1710 aa6.74□□□□□ -1.33
TRAJ16-201ENST00000390521 CUX1P39880 1505 aa6.73□□□□□ -1.33
TRAJ16-201ENST00000390521 EIF4G3O43432 1585 aaKnown RBP6.73□□□□□ -1.33
TRAJ16-201ENST00000390521 ABCC8Q09428 1581 aa6.73□□□□□ -1.33
TRAJ16-201ENST00000390521 SYNJ1O43426 1573 aa6.72□□□□□ -1.33
TRAJ16-201ENST00000390521 TOP2BQ02880 1626 aa6.71□□□□□ -1.34
TRAJ16-201ENST00000390521 POLA1P09884 1462 aaPredicted RBP6.68□□□□□ -1.34
TRAJ16-201ENST00000390521 FGD5Q6ZNL6 1462 aa6.68□□□□□ -1.34
TRAJ16-201ENST00000390521 ABCA5Q8WWZ7 1642 aa6.67□□□□□ -1.34
TRAJ16-201ENST00000390521 IFT140Q96RY7 1462 aa6.66□□□□□ -1.34
TRAJ16-201ENST00000390521 ZNF608Q9ULD9 1512 aaPredicted RBP6.66□□□□□ -1.34
TRAJ16-201ENST00000390521 RAD54L2Q9Y4B4 1467 aa6.65□□□□□ -1.35
TRAJ16-201ENST00000390521 WRNQ14191 1432 aaPredicted RBP eCLIP6.63□□□□□ -1.35
TRAJ16-201ENST00000390521 SOGA1O94964 1423 aa6.61□□□□□ -1.35
TRAJ16-201ENST00000390521 ABCA10Q8WWZ4 1543 aa6.6□□□□□ -1.35
TRAJ16-201ENST00000390521 AQRO60306 1485 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRAJ16-201ENST00000390521 ADAMTS12P58397 1594 aa6.58□□□□□ -1.36
TRAJ16-201ENST00000390521 GAPVD1Q14C86 1478 aa6.57□□□□□ -1.36
TRAJ16-201ENST00000390521 CUL7Q14999 1698 aa6.57□□□□□ -1.36
TRAJ16-201ENST00000390521 TDRD9Q8NDG6 1382 aaKnown RBP6.57□□□□□ -1.36
TRAJ16-201ENST00000390521 CTTNBP2Q8WZ74 1663 aa6.56□□□□□ -1.36
TRAJ16-201ENST00000390521 SNAPC4Q5SXM2 1469 aa6.56□□□□□ -1.36
TRAJ16-201ENST00000390521 GRIN2BQ13224 1484 aa6.55□□□□□ -1.36
TRAJ16-201ENST00000390521 ERICH3Q5RHP9 1530 aa6.55□□□□□ -1.36
TRAJ16-201ENST00000390521 RIMBP3CA6NJZ7 1639 aa6.54□□□□□ -1.36
TRAJ16-201ENST00000390521 RIMBP3BA6NNM3 1639 aa6.54□□□□□ -1.36
TRAJ16-201ENST00000390521 RIMBP3Q9UFD9 1639 aa6.54□□□□□ -1.36
TRAJ16-201ENST00000390521 MAGI1Q96QZ7 1491 aaPredicted RBP6.54□□□□□ -1.36
TRAJ16-201ENST00000390521 CLASP1Q7Z460 1538 aa6.52□□□□□ -1.37
TRAJ16-201ENST00000390521 DNAJC5Q9H3Z4 198 aa6.52□□□□□ -1.37
TRAJ16-201ENST00000390521 SYNJ2O15056 1496 aa6.52□□□□□ -1.37
TRAJ16-201ENST00000390521 CEP170Q5SW79 1584 aa6.52□□□□□ -1.37
TRAJ16-201ENST00000390521 SHROOM2Q13796 1616 aa6.5□□□□□ -1.37
TRAJ16-201ENST00000390521 RUSC2Q8N2Y8 1516 aa6.5□□□□□ -1.37
TRAJ16-201ENST00000390521 GRIN2AQ12879 1464 aa6.49□□□□□ -1.37
TRAJ16-201ENST00000390521 FBLN2P98095 1184 aa6.47□□□□□ -1.37
TRAJ16-201ENST00000390521 OSCARQ8IYS5 282 aa6.47□□□□□ -1.37
TRAJ16-201ENST00000390521 KIF27Q86VH2 1401 aa6.47□□□□□ -1.37
TRAJ16-201ENST00000390521 ARHGEF11O15085 1522 aa6.46□□□□□ -1.37
TRAJ16-201ENST00000390521 FHAD1B1AJZ9 1412 aa6.46□□□□□ -1.38
TRAJ16-201ENST00000390521 ERCC6L2Q5T890 1561 aa6.45□□□□□ -1.38
TRAJ16-201ENST00000390521 CHMP7Q8WUX9 453 aaPredicted RBP6.44□□□□□ -1.38
TRAJ16-201ENST00000390521 NUP160Q12769 1436 aa6.43□□□□□ -1.38
TRAJ16-201ENST00000390521 TRIM41Q8WV44 630 aa6.43□□□□□ -1.38
TRAJ16-201ENST00000390521 IGF1RP08069 1367 aa6.43□□□□□ -1.38
TRAJ16-201ENST00000390521 KIF13AQ9H1H9 1805 aa6.42□□□□□ -1.38
TRAJ16-201ENST00000390521 IQGAP2Q13576 1575 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms