RNA–Protein interactions for RNA: ENST00000390491.1

TRAJ46-201, Transcript of T cell receptor alpha joining 46, humanhuman

APPRIS P1 BASIC

Gene TRAJ46, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ46-201ENST00000390491 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
TRAJ46-201ENST00000390491 ABCC9O60706 1549 aa16.03■□□□□ 0.16
TRAJ46-201ENST00000390491 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.12
TRAJ46-201ENST00000390491 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
TRAJ46-201ENST00000390491 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
TRAJ46-201ENST00000390491 NACADO15069 1562 aa15□□□□□ -0.01
TRAJ46-201ENST00000390491 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
TRAJ46-201ENST00000390491 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRAJ46-201ENST00000390491 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
TRAJ46-201ENST00000390491 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
TRAJ46-201ENST00000390491 MYO15BQ96JP2 1530 aa14.74□□□□□ -0.05
TRAJ46-201ENST00000390491 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
TRAJ46-201ENST00000390491 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
TRAJ46-201ENST00000390491 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
TRAJ46-201ENST00000390491 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
TRAJ46-201ENST00000390491 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
TRAJ46-201ENST00000390491 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
TRAJ46-201ENST00000390491 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
TRAJ46-201ENST00000390491 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
TRAJ46-201ENST00000390491 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
TRAJ46-201ENST00000390491 CUX2O14529 1486 aa13.86□□□□□ -0.19
TRAJ46-201ENST00000390491 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
TRAJ46-201ENST00000390491 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
TRAJ46-201ENST00000390491 NESP48681 1621 aa13.75□□□□□ -0.21
TRAJ46-201ENST00000390491 SMARCA4P51532 1647 aa13.74□□□□□ -0.21
TRAJ46-201ENST00000390491 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
TRAJ46-201ENST00000390491 SMARCA2P51531 1590 aa13.71□□□□□ -0.21
TRAJ46-201ENST00000390491 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
TRAJ46-201ENST00000390491 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
TRAJ46-201ENST00000390491 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
TRAJ46-201ENST00000390491 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
TRAJ46-201ENST00000390491 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
TRAJ46-201ENST00000390491 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
TRAJ46-201ENST00000390491 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
TRAJ46-201ENST00000390491 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
TRAJ46-201ENST00000390491 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
TRAJ46-201ENST00000390491 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
TRAJ46-201ENST00000390491 WIZO95785 1651 aa13.39□□□□□ -0.27
TRAJ46-201ENST00000390491 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
TRAJ46-201ENST00000390491 WDR62O43379 1518 aa13.37□□□□□ -0.27
TRAJ46-201ENST00000390491 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
TRAJ46-201ENST00000390491 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
TRAJ46-201ENST00000390491 CFTRP13569 1480 aa13.24□□□□□ -0.29
TRAJ46-201ENST00000390491 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
TRAJ46-201ENST00000390491 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
TRAJ46-201ENST00000390491 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
TRAJ46-201ENST00000390491 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
TRAJ46-201ENST00000390491 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
TRAJ46-201ENST00000390491 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
TRAJ46-201ENST00000390491 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
TRAJ46-201ENST00000390491 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
TRAJ46-201ENST00000390491 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
TRAJ46-201ENST00000390491 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
TRAJ46-201ENST00000390491 IFT140Q96RY7 1462 aa13.04□□□□□ -0.32
TRAJ46-201ENST00000390491 ARHGEF11O15085 1522 aa13.01□□□□□ -0.33
TRAJ46-201ENST00000390491 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
TRAJ46-201ENST00000390491 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
TRAJ46-201ENST00000390491 CHD1O14646 1710 aa12.95□□□□□ -0.34
TRAJ46-201ENST00000390491 CYB5RLQ6IPT4 315 aa12.94□□□□□ -0.34
TRAJ46-201ENST00000390491 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
TRAJ46-201ENST00000390491 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
TRAJ46-201ENST00000390491 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
TRAJ46-201ENST00000390491 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAJ46-201ENST00000390491 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
TRAJ46-201ENST00000390491 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
TRAJ46-201ENST00000390491 FBLN2P98095 1184 aa12.84□□□□□ -0.35
TRAJ46-201ENST00000390491 RAD54L2Q9Y4B4 1467 aa12.84□□□□□ -0.35
TRAJ46-201ENST00000390491 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
TRAJ46-201ENST00000390491 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
TRAJ46-201ENST00000390491 SOGA1O94964 1423 aa12.8□□□□□ -0.36
TRAJ46-201ENST00000390491 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
TRAJ46-201ENST00000390491 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
TRAJ46-201ENST00000390491 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
TRAJ46-201ENST00000390491 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
TRAJ46-201ENST00000390491 CUX1P39880 1505 aa12.72□□□□□ -0.37
TRAJ46-201ENST00000390491 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
TRAJ46-201ENST00000390491 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.38
TRAJ46-201ENST00000390491 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
TRAJ46-201ENST00000390491 GRIN2BQ13224 1484 aa12.69□□□□□ -0.38
TRAJ46-201ENST00000390491 SYNJ2O15056 1496 aa12.67□□□□□ -0.38
TRAJ46-201ENST00000390491 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
TRAJ46-201ENST00000390491 GAPVD1Q14C86 1478 aa12.63□□□□□ -0.39
TRAJ46-201ENST00000390491 ABCA5Q8WWZ7 1642 aa12.6□□□□□ -0.39
TRAJ46-201ENST00000390491 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
TRAJ46-201ENST00000390491 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
TRAJ46-201ENST00000390491 AEBP2Q6ZN18 517 aaPredicted RBP12.56□□□□□ -0.4
TRAJ46-201ENST00000390491 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
TRAJ46-201ENST00000390491 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
TRAJ46-201ENST00000390491 NUP160Q12769 1436 aa12.51□□□□□ -0.41
TRAJ46-201ENST00000390491 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
TRAJ46-201ENST00000390491 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
TRAJ46-201ENST00000390491 KIF13AQ9H1H9 1805 aa12.49□□□□□ -0.41
TRAJ46-201ENST00000390491 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
TRAJ46-201ENST00000390491 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
TRAJ46-201ENST00000390491 TOP2BQ02880 1626 aa12.46□□□□□ -0.41
TRAJ46-201ENST00000390491 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
TRAJ46-201ENST00000390491 SUPT5HO00267 1087 aaKnown RBP12.43□□□□□ -0.42
TRAJ46-201ENST00000390491 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
TRAJ46-201ENST00000390491 PRG4Q92954 1404 aaPredicted RBP12.4□□□□□ -0.42
TRAJ46-201ENST00000390491 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms