RNA–Protein interactions for RNA: ENST00000390456.3

TRAV8-7-201, Transcript of T cell receptor alpha variable 8-7 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRAV8-7, Length 341 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-7-201ENST00000390456 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
TRAV8-7-201ENST00000390456 AEBP2Q6ZN18 517 aaPredicted RBP12.09□□□□□ -0.47
TRAV8-7-201ENST00000390456 CCDC180Q9P1Z9 1646 aa11.85□□□□□ -0.51
TRAV8-7-201ENST00000390456 ABCC9O60706 1549 aa11.25□□□□□ -0.61
TRAV8-7-201ENST00000390456 CHIC1Q5VXU3 224 aa11.24□□□□□ -0.61
TRAV8-7-201ENST00000390456 ZCCHC6Q5VYS8 1495 aaKnown RBP11.23□□□□□ -0.61
TRAV8-7-201ENST00000390456 DCAF1Q9Y4B6 1507 aa11.07□□□□□ -0.64
TRAV8-7-201ENST00000390456 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
TRAV8-7-201ENST00000390456 NACADO15069 1562 aa11□□□□□ -0.65
TRAV8-7-201ENST00000390456 MYO15BQ96JP2 1530 aa10.99□□□□□ -0.65
TRAV8-7-201ENST00000390456 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
TRAV8-7-201ENST00000390456 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
TRAV8-7-201ENST00000390456 UNC13AQ9UPW8 1703 aa10.83□□□□□ -0.68
TRAV8-7-201ENST00000390456 SHROOM4Q9ULL8 1493 aa10.79□□□□□ -0.68
TRAV8-7-201ENST00000390456 BICRAQ9NZM4 1560 aa10.6□□□□□ -0.71
TRAV8-7-201ENST00000390456 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAV8-7-201ENST00000390456 CECR2Q9BXF3 1484 aa10.38□□□□□ -0.75
TRAV8-7-201ENST00000390456 SMARCA4P51532 1647 aa10.37□□□□□ -0.75
TRAV8-7-201ENST00000390456 BAZ1AQ9NRL2 1556 aaPredicted RBP10.37□□□□□ -0.75
TRAV8-7-201ENST00000390456 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
TRAV8-7-201ENST00000390456 SENP3Q9H4L4 574 aaPredicted RBP10.32□□□□□ -0.76
TRAV8-7-201ENST00000390456 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
TRAV8-7-201ENST00000390456 WIZO95785 1651 aa10.29□□□□□ -0.76
TRAV8-7-201ENST00000390456 RSF1Q96T23 1441 aaPredicted RBP10.28□□□□□ -0.76
TRAV8-7-201ENST00000390456 SUPT5HO00267 1087 aaKnown RBP10.26□□□□□ -0.77
TRAV8-7-201ENST00000390456 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
TRAV8-7-201ENST00000390456 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
TRAV8-7-201ENST00000390456 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
TRAV8-7-201ENST00000390456 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
TRAV8-7-201ENST00000390456 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
TRAV8-7-201ENST00000390456 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
TRAV8-7-201ENST00000390456 PHF23Q9BUL5 403 aaPredicted RBP10.14□□□□□ -0.79
TRAV8-7-201ENST00000390456 BAZ1BQ9UIG0 1483 aaKnown RBP10.14□□□□□ -0.79
TRAV8-7-201ENST00000390456 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
TRAV8-7-201ENST00000390456 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
TRAV8-7-201ENST00000390456 PRDM2Q13029 1718 aa9.97□□□□□ -0.81
TRAV8-7-201ENST00000390456 DNAJC5BQ9UF47 199 aa9.94□□□□□ -0.82
TRAV8-7-201ENST00000390456 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
TRAV8-7-201ENST00000390456 CFTRP13569 1480 aa9.84□□□□□ -0.83
TRAV8-7-201ENST00000390456 NESP48681 1621 aa9.82□□□□□ -0.84
TRAV8-7-201ENST00000390456 CADPSQ9ULU8 1353 aa9.81□□□□□ -0.84
TRAV8-7-201ENST00000390456 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
TRAV8-7-201ENST00000390456 ABCC8Q09428 1581 aa9.8□□□□□ -0.84
TRAV8-7-201ENST00000390456 FANCD2Q9BXW9 1451 aa9.75□□□□□ -0.85
TRAV8-7-201ENST00000390456 CEP164Q9UPV0 1460 aa9.73□□□□□ -0.85
TRAV8-7-201ENST00000390456 BIVM-ERCC5R4GMW8 1640 aa9.73□□□□□ -0.85
TRAV8-7-201ENST00000390456 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
TRAV8-7-201ENST00000390456 PDS5BQ9NTI5 1447 aa9.72□□□□□ -0.85
TRAV8-7-201ENST00000390456 WRNQ14191 1432 aaPredicted RBP eCLIP9.71□□□□□ -0.86
TRAV8-7-201ENST00000390456 TOP2BQ02880 1626 aa9.7□□□□□ -0.86
TRAV8-7-201ENST00000390456 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
TRAV8-7-201ENST00000390456 CUX1P39880 1505 aa9.68□□□□□ -0.86
TRAV8-7-201ENST00000390456 FOXD1Q16676 465 aa9.68□□□□□ -0.86
TRAV8-7-201ENST00000390456 ERCC6Q03468 1493 aa9.67□□□□□ -0.86
TRAV8-7-201ENST00000390456 TRIM41Q8WV44 630 aa9.66□□□□□ -0.86
TRAV8-7-201ENST00000390456 THOC2Q8NI27 1593 aaKnown RBP9.66□□□□□ -0.86
TRAV8-7-201ENST00000390456 URB2Q14146 1524 aaKnown RBP9.64□□□□□ -0.87
TRAV8-7-201ENST00000390456 TOPBP1Q92547 1522 aa9.64□□□□□ -0.87
TRAV8-7-201ENST00000390456 MRC2Q9UBG0 1479 aa9.64□□□□□ -0.87
TRAV8-7-201ENST00000390456 WDR62O43379 1518 aa9.61□□□□□ -0.87
TRAV8-7-201ENST00000390456 FGD5Q6ZNL6 1462 aa9.6□□□□□ -0.87
TRAV8-7-201ENST00000390456 WDR97A6NE52 1622 aa9.59□□□□□ -0.87
TRAV8-7-201ENST00000390456 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
TRAV8-7-201ENST00000390456 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
TRAV8-7-201ENST00000390456 RAD54L2Q9Y4B4 1467 aa9.52□□□□□ -0.89
TRAV8-7-201ENST00000390456 SOGA1O94964 1423 aa9.51□□□□□ -0.89
TRAV8-7-201ENST00000390456 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
TRAV8-7-201ENST00000390456 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
TRAV8-7-201ENST00000390456 ABCA5Q8WWZ7 1642 aa9.5□□□□□ -0.89
TRAV8-7-201ENST00000390456 CUX2O14529 1486 aa9.5□□□□□ -0.89
TRAV8-7-201ENST00000390456 RUSC2Q8N2Y8 1516 aa9.5□□□□□ -0.89
TRAV8-7-201ENST00000390456 EEA1Q15075 1411 aa9.49□□□□□ -0.89
TRAV8-7-201ENST00000390456 POTEDQ86YR6 584 aa9.49□□□□□ -0.89
TRAV8-7-201ENST00000390456 IFT140Q96RY7 1462 aa9.48□□□□□ -0.89
TRAV8-7-201ENST00000390456 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
TRAV8-7-201ENST00000390456 KIF27Q86VH2 1401 aa9.48□□□□□ -0.89
TRAV8-7-201ENST00000390456 EIF4G3O43432 1585 aaKnown RBP9.47□□□□□ -0.89
TRAV8-7-201ENST00000390456 KIF21BO75037 1637 aa9.44□□□□□ -0.9
TRAV8-7-201ENST00000390456 CUL7Q14999 1698 aa9.44□□□□□ -0.9
TRAV8-7-201ENST00000390456 ZNF608Q9ULD9 1512 aaPredicted RBP9.42□□□□□ -0.9
TRAV8-7-201ENST00000390456 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
TRAV8-7-201ENST00000390456 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
TRAV8-7-201ENST00000390456 TDRD9Q8NDG6 1382 aaKnown RBP9.4□□□□□ -0.9
TRAV8-7-201ENST00000390456 ADAMTS12P58397 1594 aa9.39□□□□□ -0.91
TRAV8-7-201ENST00000390456 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
TRAV8-7-201ENST00000390456 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRAV8-7-201ENST00000390456 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
TRAV8-7-201ENST00000390456 GRIN2BQ13224 1484 aa9.38□□□□□ -0.91
TRAV8-7-201ENST00000390456 CTTNBP2Q8WZ74 1663 aa9.37□□□□□ -0.91
TRAV8-7-201ENST00000390456 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
TRAV8-7-201ENST00000390456 EHMT2Q96KQ7 1210 aa9.36□□□□□ -0.91
TRAV8-7-201ENST00000390456 IGF1RP08069 1367 aa9.36□□□□□ -0.91
TRAV8-7-201ENST00000390456 SNAPC4Q5SXM2 1469 aa9.35□□□□□ -0.91
TRAV8-7-201ENST00000390456 RAPGEF2Q9Y4G8 1499 aa9.35□□□□□ -0.91
TRAV8-7-201ENST00000390456 CHD1O14646 1710 aa9.34□□□□□ -0.92
TRAV8-7-201ENST00000390456 LOC105371045A0A1W2PR82 267 aa9.33□□□□□ -0.92
TRAV8-7-201ENST00000390456 CARMIL1Q5VZK9 1371 aa9.33□□□□□ -0.92
TRAV8-7-201ENST00000390456 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
TRAV8-7-201ENST00000390456 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
TRAV8-7-201ENST00000390456 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms