RNA–Protein interactions for RNA: ENST00000390435.1

TRAV8-3-201, Transcript of T cell receptor alpha variable 8-3, humanhuman

APPRIS P1 BASIC

Gene TRAV8-3, Length 341 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3-201ENST00000390435 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
TRAV8-3-201ENST00000390435 CCDC180Q9P1Z9 1646 aa15.93■□□□□ 0.14
TRAV8-3-201ENST00000390435 ABCC9O60706 1549 aa15.29■□□□□ 0.04
TRAV8-3-201ENST00000390435 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
TRAV8-3-201ENST00000390435 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
TRAV8-3-201ENST00000390435 NACADO15069 1562 aa14.9□□□□□ -0.02
TRAV8-3-201ENST00000390435 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
TRAV8-3-201ENST00000390435 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
TRAV8-3-201ENST00000390435 MYO15BQ96JP2 1530 aa14.83□□□□□ -0.04
TRAV8-3-201ENST00000390435 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
TRAV8-3-201ENST00000390435 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
TRAV8-3-201ENST00000390435 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
TRAV8-3-201ENST00000390435 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
TRAV8-3-201ENST00000390435 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAV8-3-201ENST00000390435 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
TRAV8-3-201ENST00000390435 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
TRAV8-3-201ENST00000390435 SMARCA4P51532 1647 aa13.9□□□□□ -0.19
TRAV8-3-201ENST00000390435 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
TRAV8-3-201ENST00000390435 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
TRAV8-3-201ENST00000390435 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
TRAV8-3-201ENST00000390435 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
TRAV8-3-201ENST00000390435 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
TRAV8-3-201ENST00000390435 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
TRAV8-3-201ENST00000390435 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
TRAV8-3-201ENST00000390435 WIZO95785 1651 aa13.69□□□□□ -0.22
TRAV8-3-201ENST00000390435 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
TRAV8-3-201ENST00000390435 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
TRAV8-3-201ENST00000390435 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
TRAV8-3-201ENST00000390435 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
TRAV8-3-201ENST00000390435 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
TRAV8-3-201ENST00000390435 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
TRAV8-3-201ENST00000390435 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
TRAV8-3-201ENST00000390435 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
TRAV8-3-201ENST00000390435 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
TRAV8-3-201ENST00000390435 CADPSQ9ULU8 1353 aa13.3□□□□□ -0.28
TRAV8-3-201ENST00000390435 CFTRP13569 1480 aa13.26□□□□□ -0.29
TRAV8-3-201ENST00000390435 NESP48681 1621 aa13.26□□□□□ -0.29
TRAV8-3-201ENST00000390435 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
TRAV8-3-201ENST00000390435 PDS5BQ9NTI5 1447 aa13.26□□□□□ -0.29
TRAV8-3-201ENST00000390435 KIF21AQ7Z4S6 1674 aa13.2□□□□□ -0.3
TRAV8-3-201ENST00000390435 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
TRAV8-3-201ENST00000390435 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
TRAV8-3-201ENST00000390435 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
TRAV8-3-201ENST00000390435 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
TRAV8-3-201ENST00000390435 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
TRAV8-3-201ENST00000390435 WDR62O43379 1518 aa13.02□□□□□ -0.33
TRAV8-3-201ENST00000390435 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
TRAV8-3-201ENST00000390435 CUX2O14529 1486 aa13□□□□□ -0.33
TRAV8-3-201ENST00000390435 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
TRAV8-3-201ENST00000390435 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
TRAV8-3-201ENST00000390435 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
TRAV8-3-201ENST00000390435 CUX1P39880 1505 aa12.94□□□□□ -0.34
TRAV8-3-201ENST00000390435 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
TRAV8-3-201ENST00000390435 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
TRAV8-3-201ENST00000390435 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
TRAV8-3-201ENST00000390435 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
TRAV8-3-201ENST00000390435 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
TRAV8-3-201ENST00000390435 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
TRAV8-3-201ENST00000390435 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
TRAV8-3-201ENST00000390435 SOGA1O94964 1423 aa12.84□□□□□ -0.35
TRAV8-3-201ENST00000390435 WDR97A6NE52 1622 aa12.81□□□□□ -0.36
TRAV8-3-201ENST00000390435 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
TRAV8-3-201ENST00000390435 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
TRAV8-3-201ENST00000390435 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
TRAV8-3-201ENST00000390435 EIF4G3O43432 1585 aaKnown RBP12.76□□□□□ -0.37
TRAV8-3-201ENST00000390435 CHIC1Q5VXU3 224 aa12.75□□□□□ -0.37
TRAV8-3-201ENST00000390435 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
TRAV8-3-201ENST00000390435 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
TRAV8-3-201ENST00000390435 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
TRAV8-3-201ENST00000390435 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
TRAV8-3-201ENST00000390435 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
TRAV8-3-201ENST00000390435 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
TRAV8-3-201ENST00000390435 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAV8-3-201ENST00000390435 GRIN2BQ13224 1484 aa12.69□□□□□ -0.38
TRAV8-3-201ENST00000390435 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
TRAV8-3-201ENST00000390435 EEA1Q15075 1411 aa12.65□□□□□ -0.38
TRAV8-3-201ENST00000390435 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
TRAV8-3-201ENST00000390435 CUL7Q14999 1698 aa12.64□□□□□ -0.39
TRAV8-3-201ENST00000390435 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
TRAV8-3-201ENST00000390435 ADAMTS12P58397 1594 aa12.6□□□□□ -0.39
TRAV8-3-201ENST00000390435 CHD1O14646 1710 aa12.58□□□□□ -0.4
TRAV8-3-201ENST00000390435 FBLN2P98095 1184 aa12.58□□□□□ -0.4
TRAV8-3-201ENST00000390435 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
TRAV8-3-201ENST00000390435 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
TRAV8-3-201ENST00000390435 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
TRAV8-3-201ENST00000390435 FAM9AQ8IZU1 332 aaPredicted RBP12.55□□□□□ -0.4
TRAV8-3-201ENST00000390435 RUSC2Q8N2Y8 1516 aa12.55□□□□□ -0.4
TRAV8-3-201ENST00000390435 IGF1RP08069 1367 aa12.54□□□□□ -0.4
TRAV8-3-201ENST00000390435 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
TRAV8-3-201ENST00000390435 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
TRAV8-3-201ENST00000390435 GRIN2AQ12879 1464 aa12.51□□□□□ -0.41
TRAV8-3-201ENST00000390435 RAPGEF2Q9Y4G8 1499 aa12.51□□□□□ -0.41
TRAV8-3-201ENST00000390435 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
TRAV8-3-201ENST00000390435 KIF21BO75037 1637 aa12.48□□□□□ -0.41
TRAV8-3-201ENST00000390435 PRXQ9BXM0 1461 aa12.46□□□□□ -0.42
TRAV8-3-201ENST00000390435 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
TRAV8-3-201ENST00000390435 GOLGA3Q08378 1498 aa12.43□□□□□ -0.42
TRAV8-3-201ENST00000390435 CEP170Q5SW79 1584 aa12.42□□□□□ -0.42
TRAV8-3-201ENST00000390435 NUP160Q12769 1436 aa12.41□□□□□ -0.42
TRAV8-3-201ENST00000390435 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms