RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
TRBV27-201ENST00000390399 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
TRBV27-201ENST00000390399 ABCC9O60706 1549 aa19.28■□□□□ 0.68
TRBV27-201ENST00000390399 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
TRBV27-201ENST00000390399 NACADO15069 1562 aa18.45■□□□□ 0.54
TRBV27-201ENST00000390399 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
TRBV27-201ENST00000390399 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
TRBV27-201ENST00000390399 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
TRBV27-201ENST00000390399 DCAF1Q9Y4B6 1507 aa18.17■□□□□ 0.5
TRBV27-201ENST00000390399 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
TRBV27-201ENST00000390399 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRBV27-201ENST00000390399 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
TRBV27-201ENST00000390399 SCRIBQ14160 1630 aa17.89■□□□□ 0.45
TRBV27-201ENST00000390399 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
TRBV27-201ENST00000390399 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
TRBV27-201ENST00000390399 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
TRBV27-201ENST00000390399 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
TRBV27-201ENST00000390399 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
TRBV27-201ENST00000390399 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
TRBV27-201ENST00000390399 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
TRBV27-201ENST00000390399 NCAPD3P42695 1498 aa17■□□□□ 0.31
TRBV27-201ENST00000390399 ATAD2BQ9ULI0 1458 aa17■□□□□ 0.31
TRBV27-201ENST00000390399 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
TRBV27-201ENST00000390399 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
TRBV27-201ENST00000390399 MROH2BQ7Z745 1585 aa16.93■□□□□ 0.3
TRBV27-201ENST00000390399 PEG3Q9GZU2 1588 aa16.91■□□□□ 0.3
TRBV27-201ENST00000390399 BAZ1BQ9UIG0 1483 aaKnown RBP16.87■□□□□ 0.29
TRBV27-201ENST00000390399 WIZO95785 1651 aa16.75■□□□□ 0.27
TRBV27-201ENST00000390399 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
TRBV27-201ENST00000390399 NESP48681 1621 aa16.65■□□□□ 0.26
TRBV27-201ENST00000390399 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
TRBV27-201ENST00000390399 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
TRBV27-201ENST00000390399 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
TRBV27-201ENST00000390399 CUX2O14529 1486 aa16.5■□□□□ 0.23
TRBV27-201ENST00000390399 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
TRBV27-201ENST00000390399 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
TRBV27-201ENST00000390399 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
TRBV27-201ENST00000390399 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
TRBV27-201ENST00000390399 CFTRP13569 1480 aa16.39■□□□□ 0.21
TRBV27-201ENST00000390399 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
TRBV27-201ENST00000390399 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
TRBV27-201ENST00000390399 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
TRBV27-201ENST00000390399 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
TRBV27-201ENST00000390399 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
TRBV27-201ENST00000390399 WDR62O43379 1518 aa16.28■□□□□ 0.2
TRBV27-201ENST00000390399 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
TRBV27-201ENST00000390399 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
TRBV27-201ENST00000390399 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
TRBV27-201ENST00000390399 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
TRBV27-201ENST00000390399 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
TRBV27-201ENST00000390399 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
TRBV27-201ENST00000390399 IFT140Q96RY7 1462 aa15.98■□□□□ 0.15
TRBV27-201ENST00000390399 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
TRBV27-201ENST00000390399 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
TRBV27-201ENST00000390399 CUX1P39880 1505 aa15.9■□□□□ 0.14
TRBV27-201ENST00000390399 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
TRBV27-201ENST00000390399 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
TRBV27-201ENST00000390399 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
TRBV27-201ENST00000390399 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
TRBV27-201ENST00000390399 SOGA1O94964 1423 aa15.83■□□□□ 0.12
TRBV27-201ENST00000390399 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRBV27-201ENST00000390399 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
TRBV27-201ENST00000390399 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
TRBV27-201ENST00000390399 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
TRBV27-201ENST00000390399 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
TRBV27-201ENST00000390399 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
TRBV27-201ENST00000390399 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
TRBV27-201ENST00000390399 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
TRBV27-201ENST00000390399 CHD1O14646 1710 aa15.7■□□□□ 0.1
TRBV27-201ENST00000390399 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
TRBV27-201ENST00000390399 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
TRBV27-201ENST00000390399 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
TRBV27-201ENST00000390399 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
TRBV27-201ENST00000390399 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
TRBV27-201ENST00000390399 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
TRBV27-201ENST00000390399 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
TRBV27-201ENST00000390399 FBLN2P98095 1184 aa15.64■□□□□ 0.09
TRBV27-201ENST00000390399 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
TRBV27-201ENST00000390399 CHMP7Q8WUX9 453 aaPredicted RBP15.57■□□□□ 0.08
TRBV27-201ENST00000390399 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
TRBV27-201ENST00000390399 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
TRBV27-201ENST00000390399 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
TRBV27-201ENST00000390399 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
TRBV27-201ENST00000390399 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
TRBV27-201ENST00000390399 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
TRBV27-201ENST00000390399 ERICH3Q5RHP9 1530 aa15.52■□□□□ 0.07
TRBV27-201ENST00000390399 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
TRBV27-201ENST00000390399 GRIN2AQ12879 1464 aa15.47■□□□□ 0.07
TRBV27-201ENST00000390399 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
TRBV27-201ENST00000390399 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
TRBV27-201ENST00000390399 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
TRBV27-201ENST00000390399 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
TRBV27-201ENST00000390399 NUP160Q12769 1436 aa15.41■□□□□ 0.06
TRBV27-201ENST00000390399 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
TRBV27-201ENST00000390399 CUL7Q14999 1698 aa15.37■□□□□ 0.05
TRBV27-201ENST00000390399 IGF1RP08069 1367 aa15.35■□□□□ 0.05
TRBV27-201ENST00000390399 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
TRBV27-201ENST00000390399 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
TRBV27-201ENST00000390399 ERCC6L2Q5T890 1561 aa15.29■□□□□ 0.04
TRBV27-201ENST00000390399 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms