RNA–Protein interactions for RNA: ENST00000390393.3

TRBV19-201, Transcript of T cell receptor beta variable 19, humanhuman

APPRIS P1 BASIC

Gene TRBV19, Length 552 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19-201ENST00000390393 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
TRBV19-201ENST00000390393 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
TRBV19-201ENST00000390393 ABCC9O60706 1549 aa15.22■□□□□ 0.03
TRBV19-201ENST00000390393 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
TRBV19-201ENST00000390393 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
TRBV19-201ENST00000390393 DCAF8L2P0C7V8 631 aa14.71□□□□□ -0.05
TRBV19-201ENST00000390393 NACADO15069 1562 aa14.66□□□□□ -0.06
TRBV19-201ENST00000390393 MYO15BQ96JP2 1530 aa14.64□□□□□ -0.07
TRBV19-201ENST00000390393 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
TRBV19-201ENST00000390393 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
TRBV19-201ENST00000390393 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
TRBV19-201ENST00000390393 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRBV19-201ENST00000390393 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
TRBV19-201ENST00000390393 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
TRBV19-201ENST00000390393 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
TRBV19-201ENST00000390393 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
TRBV19-201ENST00000390393 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
TRBV19-201ENST00000390393 EIF4G1Q04637 1599 aaKnown RBP13.82□□□□□ -0.2
TRBV19-201ENST00000390393 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
TRBV19-201ENST00000390393 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
TRBV19-201ENST00000390393 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
TRBV19-201ENST00000390393 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.23
TRBV19-201ENST00000390393 ATAD2BQ9ULI0 1458 aa13.57□□□□□ -0.24
TRBV19-201ENST00000390393 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
TRBV19-201ENST00000390393 MROH2BQ7Z745 1585 aa13.52□□□□□ -0.25
TRBV19-201ENST00000390393 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
TRBV19-201ENST00000390393 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
TRBV19-201ENST00000390393 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
TRBV19-201ENST00000390393 RSF1Q96T23 1441 aaPredicted RBP13.42□□□□□ -0.26
TRBV19-201ENST00000390393 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
TRBV19-201ENST00000390393 WIZO95785 1651 aa13.31□□□□□ -0.28
TRBV19-201ENST00000390393 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
TRBV19-201ENST00000390393 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
TRBV19-201ENST00000390393 NESP48681 1621 aa13.17□□□□□ -0.3
TRBV19-201ENST00000390393 LAMC3Q9Y6N6 1575 aa13.14□□□□□ -0.31
TRBV19-201ENST00000390393 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
TRBV19-201ENST00000390393 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
TRBV19-201ENST00000390393 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
TRBV19-201ENST00000390393 CFTRP13569 1480 aa13.1□□□□□ -0.31
TRBV19-201ENST00000390393 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.32
TRBV19-201ENST00000390393 CUX2O14529 1486 aa13□□□□□ -0.33
TRBV19-201ENST00000390393 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
TRBV19-201ENST00000390393 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
TRBV19-201ENST00000390393 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
TRBV19-201ENST00000390393 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
TRBV19-201ENST00000390393 SENP3Q9H4L4 574 aaPredicted RBP12.93□□□□□ -0.34
TRBV19-201ENST00000390393 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
TRBV19-201ENST00000390393 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
TRBV19-201ENST00000390393 WDR62O43379 1518 aa12.88□□□□□ -0.35
TRBV19-201ENST00000390393 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
TRBV19-201ENST00000390393 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
TRBV19-201ENST00000390393 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
TRBV19-201ENST00000390393 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
TRBV19-201ENST00000390393 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
TRBV19-201ENST00000390393 IFT140Q96RY7 1462 aa12.71□□□□□ -0.38
TRBV19-201ENST00000390393 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
TRBV19-201ENST00000390393 CUX1P39880 1505 aa12.67□□□□□ -0.38
TRBV19-201ENST00000390393 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
TRBV19-201ENST00000390393 SOGA1O94964 1423 aa12.66□□□□□ -0.38
TRBV19-201ENST00000390393 ZNF608Q9ULD9 1512 aaPredicted RBP12.63□□□□□ -0.39
TRBV19-201ENST00000390393 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
TRBV19-201ENST00000390393 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
TRBV19-201ENST00000390393 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
TRBV19-201ENST00000390393 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
TRBV19-201ENST00000390393 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRBV19-201ENST00000390393 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
TRBV19-201ENST00000390393 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
TRBV19-201ENST00000390393 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
TRBV19-201ENST00000390393 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
TRBV19-201ENST00000390393 SYNJ1O43426 1573 aa12.52□□□□□ -0.41
TRBV19-201ENST00000390393 WDR97A6NE52 1622 aa12.51□□□□□ -0.41
TRBV19-201ENST00000390393 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
TRBV19-201ENST00000390393 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
TRBV19-201ENST00000390393 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
TRBV19-201ENST00000390393 GAPVD1Q14C86 1478 aa12.48□□□□□ -0.41
TRBV19-201ENST00000390393 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
TRBV19-201ENST00000390393 FBLN2P98095 1184 aa12.44□□□□□ -0.42
TRBV19-201ENST00000390393 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
TRBV19-201ENST00000390393 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
TRBV19-201ENST00000390393 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
TRBV19-201ENST00000390393 SYNJ2O15056 1496 aa12.4□□□□□ -0.43
TRBV19-201ENST00000390393 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
TRBV19-201ENST00000390393 IGF1RP08069 1367 aa12.39□□□□□ -0.43
TRBV19-201ENST00000390393 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
TRBV19-201ENST00000390393 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
TRBV19-201ENST00000390393 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
TRBV19-201ENST00000390393 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
TRBV19-201ENST00000390393 GRIN2AQ12879 1464 aa12.3□□□□□ -0.44
TRBV19-201ENST00000390393 NUP160Q12769 1436 aa12.28□□□□□ -0.44
TRBV19-201ENST00000390393 CHD1O14646 1710 aa12.28□□□□□ -0.44
TRBV19-201ENST00000390393 CARMIL1Q5VZK9 1371 aa12.28□□□□□ -0.44
TRBV19-201ENST00000390393 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
TRBV19-201ENST00000390393 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
TRBV19-201ENST00000390393 RUSC2Q8N2Y8 1516 aa12.25□□□□□ -0.45
TRBV19-201ENST00000390393 ARHGEF11O15085 1522 aa12.24□□□□□ -0.45
TRBV19-201ENST00000390393 JPH4Q96JJ6 628 aa12.23□□□□□ -0.45
TRBV19-201ENST00000390393 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
TRBV19-201ENST00000390393 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
TRBV19-201ENST00000390393 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
TRBV19-201ENST00000390393 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms