RNA–Protein interactions for RNA: ENST00000390389.3

TRBV23OR9-2-201, Transcript of T cell receptor beta variable 23/OR9-2 (pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRBV23OR9-2, Length 335 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2-201ENST00000390389 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
TRBV23OR9-2-201ENST00000390389 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
TRBV23OR9-2-201ENST00000390389 CCDC180Q9P1Z9 1646 aa18.87■□□□□ 0.61
TRBV23OR9-2-201ENST00000390389 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
TRBV23OR9-2-201ENST00000390389 ABCC9O60706 1549 aa18.03■□□□□ 0.48
TRBV23OR9-2-201ENST00000390389 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
TRBV23OR9-2-201ENST00000390389 NACADO15069 1562 aa17.56■□□□□ 0.4
TRBV23OR9-2-201ENST00000390389 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
TRBV23OR9-2-201ENST00000390389 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
TRBV23OR9-2-201ENST00000390389 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
TRBV23OR9-2-201ENST00000390389 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
TRBV23OR9-2-201ENST00000390389 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
TRBV23OR9-2-201ENST00000390389 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
TRBV23OR9-2-201ENST00000390389 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
TRBV23OR9-2-201ENST00000390389 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
TRBV23OR9-2-201ENST00000390389 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRBV23OR9-2-201ENST00000390389 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
TRBV23OR9-2-201ENST00000390389 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
TRBV23OR9-2-201ENST00000390389 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
TRBV23OR9-2-201ENST00000390389 CECR2Q9BXF3 1484 aa16.41■□□□□ 0.22
TRBV23OR9-2-201ENST00000390389 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
TRBV23OR9-2-201ENST00000390389 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
TRBV23OR9-2-201ENST00000390389 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
TRBV23OR9-2-201ENST00000390389 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
TRBV23OR9-2-201ENST00000390389 WIZO95785 1651 aa16.22■□□□□ 0.19
TRBV23OR9-2-201ENST00000390389 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
TRBV23OR9-2-201ENST00000390389 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
TRBV23OR9-2-201ENST00000390389 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
TRBV23OR9-2-201ENST00000390389 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
TRBV23OR9-2-201ENST00000390389 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
TRBV23OR9-2-201ENST00000390389 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
TRBV23OR9-2-201ENST00000390389 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
TRBV23OR9-2-201ENST00000390389 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
TRBV23OR9-2-201ENST00000390389 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.16
TRBV23OR9-2-201ENST00000390389 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
TRBV23OR9-2-201ENST00000390389 PRDM2Q13029 1718 aa15.83■□□□□ 0.13
TRBV23OR9-2-201ENST00000390389 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.11
TRBV23OR9-2-201ENST00000390389 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
TRBV23OR9-2-201ENST00000390389 NESP48681 1621 aa15.68■□□□□ 0.1
TRBV23OR9-2-201ENST00000390389 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
TRBV23OR9-2-201ENST00000390389 CFTRP13569 1480 aa15.64■□□□□ 0.09
TRBV23OR9-2-201ENST00000390389 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
TRBV23OR9-2-201ENST00000390389 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
TRBV23OR9-2-201ENST00000390389 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
TRBV23OR9-2-201ENST00000390389 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
TRBV23OR9-2-201ENST00000390389 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.07
TRBV23OR9-2-201ENST00000390389 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
TRBV23OR9-2-201ENST00000390389 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
TRBV23OR9-2-201ENST00000390389 WDR62O43379 1518 aa15.39■□□□□ 0.05
TRBV23OR9-2-201ENST00000390389 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
TRBV23OR9-2-201ENST00000390389 URB2Q14146 1524 aaKnown RBP15.35■□□□□ 0.05
TRBV23OR9-2-201ENST00000390389 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
TRBV23OR9-2-201ENST00000390389 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
TRBV23OR9-2-201ENST00000390389 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
TRBV23OR9-2-201ENST00000390389 CUX1P39880 1505 aa15.3■□□□□ 0.04
TRBV23OR9-2-201ENST00000390389 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
TRBV23OR9-2-201ENST00000390389 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
TRBV23OR9-2-201ENST00000390389 CUX2O14529 1486 aa15.29■□□□□ 0.04
TRBV23OR9-2-201ENST00000390389 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
TRBV23OR9-2-201ENST00000390389 WDR97A6NE52 1622 aa15.22■□□□□ 0.03
TRBV23OR9-2-201ENST00000390389 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
TRBV23OR9-2-201ENST00000390389 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
TRBV23OR9-2-201ENST00000390389 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
TRBV23OR9-2-201ENST00000390389 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
TRBV23OR9-2-201ENST00000390389 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
TRBV23OR9-2-201ENST00000390389 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
TRBV23OR9-2-201ENST00000390389 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0.01
TRBV23OR9-2-201ENST00000390389 SOGA1O94964 1423 aa15.08■□□□□ 0
TRBV23OR9-2-201ENST00000390389 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
TRBV23OR9-2-201ENST00000390389 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
TRBV23OR9-2-201ENST00000390389 FOXD1Q16676 465 aa15.04■□□□□ -0
TRBV23OR9-2-201ENST00000390389 ZNF608Q9ULD9 1512 aaPredicted RBP15.02■□□□□ -0
TRBV23OR9-2-201ENST00000390389 TRIM41Q8WV44 630 aa15□□□□□ -0.01
TRBV23OR9-2-201ENST00000390389 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 CHD1O14646 1710 aa14.93□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 CUL7Q14999 1698 aa14.93□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
TRBV23OR9-2-201ENST00000390389 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
TRBV23OR9-2-201ENST00000390389 MAGI1Q96QZ7 1491 aaPredicted RBP14.88□□□□□ -0.03
TRBV23OR9-2-201ENST00000390389 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
TRBV23OR9-2-201ENST00000390389 EEA1Q15075 1411 aa14.83□□□□□ -0.03
TRBV23OR9-2-201ENST00000390389 SYNJ2O15056 1496 aa14.8□□□□□ -0.04
TRBV23OR9-2-201ENST00000390389 FHAD1B1AJZ9 1412 aa14.77□□□□□ -0.04
TRBV23OR9-2-201ENST00000390389 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
TRBV23OR9-2-201ENST00000390389 KIF21BO75037 1637 aa14.75□□□□□ -0.05
TRBV23OR9-2-201ENST00000390389 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
TRBV23OR9-2-201ENST00000390389 IGF1RP08069 1367 aa14.74□□□□□ -0.05
TRBV23OR9-2-201ENST00000390389 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
TRBV23OR9-2-201ENST00000390389 RAPGEF2Q9Y4G8 1499 aa14.7□□□□□ -0.06
TRBV23OR9-2-201ENST00000390389 CEP170Q5SW79 1584 aa14.7□□□□□ -0.06
TRBV23OR9-2-201ENST00000390389 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
TRBV23OR9-2-201ENST00000390389 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
TRBV23OR9-2-201ENST00000390389 FBLN2P98095 1184 aa14.68□□□□□ -0.06
TRBV23OR9-2-201ENST00000390389 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
TRBV23OR9-2-201ENST00000390389 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms