RNA–Protein interactions for RNA: ENST00000390374.3

TRBV7-6-201, Transcript of T cell receptor beta variable 7-6, humanhuman

APPRIS P1 BASIC

Gene TRBV7-6, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-6-201ENST00000390374 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
TRBV7-6-201ENST00000390374 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
TRBV7-6-201ENST00000390374 ABCC9O60706 1549 aa20.75■□□□□ 0.91
TRBV7-6-201ENST00000390374 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
TRBV7-6-201ENST00000390374 NACADO15069 1562 aa19.8■□□□□ 0.76
TRBV7-6-201ENST00000390374 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
TRBV7-6-201ENST00000390374 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
TRBV7-6-201ENST00000390374 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
TRBV7-6-201ENST00000390374 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
TRBV7-6-201ENST00000390374 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
TRBV7-6-201ENST00000390374 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRBV7-6-201ENST00000390374 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
TRBV7-6-201ENST00000390374 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
TRBV7-6-201ENST00000390374 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
TRBV7-6-201ENST00000390374 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
TRBV7-6-201ENST00000390374 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
TRBV7-6-201ENST00000390374 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
TRBV7-6-201ENST00000390374 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
TRBV7-6-201ENST00000390374 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
TRBV7-6-201ENST00000390374 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
TRBV7-6-201ENST00000390374 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
TRBV7-6-201ENST00000390374 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
TRBV7-6-201ENST00000390374 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
TRBV7-6-201ENST00000390374 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
TRBV7-6-201ENST00000390374 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
TRBV7-6-201ENST00000390374 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
TRBV7-6-201ENST00000390374 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
TRBV7-6-201ENST00000390374 NESP48681 1621 aa17.9■□□□□ 0.46
TRBV7-6-201ENST00000390374 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
TRBV7-6-201ENST00000390374 WIZO95785 1651 aa17.87■□□□□ 0.45
TRBV7-6-201ENST00000390374 CUX2O14529 1486 aa17.84■□□□□ 0.45
TRBV7-6-201ENST00000390374 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
TRBV7-6-201ENST00000390374 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
TRBV7-6-201ENST00000390374 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
TRBV7-6-201ENST00000390374 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
TRBV7-6-201ENST00000390374 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
TRBV7-6-201ENST00000390374 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
TRBV7-6-201ENST00000390374 KIF21AQ7Z4S6 1674 aa17.65■□□□□ 0.42
TRBV7-6-201ENST00000390374 CFTRP13569 1480 aa17.59■□□□□ 0.41
TRBV7-6-201ENST00000390374 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
TRBV7-6-201ENST00000390374 WDR62O43379 1518 aa17.54■□□□□ 0.4
TRBV7-6-201ENST00000390374 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
TRBV7-6-201ENST00000390374 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
TRBV7-6-201ENST00000390374 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
TRBV7-6-201ENST00000390374 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
TRBV7-6-201ENST00000390374 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
TRBV7-6-201ENST00000390374 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
TRBV7-6-201ENST00000390374 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
TRBV7-6-201ENST00000390374 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
TRBV7-6-201ENST00000390374 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
TRBV7-6-201ENST00000390374 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
TRBV7-6-201ENST00000390374 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
TRBV7-6-201ENST00000390374 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
TRBV7-6-201ENST00000390374 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
TRBV7-6-201ENST00000390374 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
TRBV7-6-201ENST00000390374 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
TRBV7-6-201ENST00000390374 CUX1P39880 1505 aa17.01■□□□□ 0.31
TRBV7-6-201ENST00000390374 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
TRBV7-6-201ENST00000390374 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
TRBV7-6-201ENST00000390374 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
TRBV7-6-201ENST00000390374 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRBV7-6-201ENST00000390374 SOGA1O94964 1423 aa16.95■□□□□ 0.3
TRBV7-6-201ENST00000390374 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
TRBV7-6-201ENST00000390374 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
TRBV7-6-201ENST00000390374 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
TRBV7-6-201ENST00000390374 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
TRBV7-6-201ENST00000390374 CHD1O14646 1710 aa16.82■□□□□ 0.28
TRBV7-6-201ENST00000390374 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
TRBV7-6-201ENST00000390374 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
TRBV7-6-201ENST00000390374 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
TRBV7-6-201ENST00000390374 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
TRBV7-6-201ENST00000390374 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
TRBV7-6-201ENST00000390374 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
TRBV7-6-201ENST00000390374 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
TRBV7-6-201ENST00000390374 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
TRBV7-6-201ENST00000390374 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
TRBV7-6-201ENST00000390374 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
TRBV7-6-201ENST00000390374 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
TRBV7-6-201ENST00000390374 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
TRBV7-6-201ENST00000390374 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
TRBV7-6-201ENST00000390374 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
TRBV7-6-201ENST00000390374 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
TRBV7-6-201ENST00000390374 FBLN2P98095 1184 aa16.72■□□□□ 0.27
TRBV7-6-201ENST00000390374 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
TRBV7-6-201ENST00000390374 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
TRBV7-6-201ENST00000390374 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
TRBV7-6-201ENST00000390374 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
TRBV7-6-201ENST00000390374 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
TRBV7-6-201ENST00000390374 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
TRBV7-6-201ENST00000390374 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
TRBV7-6-201ENST00000390374 NUP160Q12769 1436 aa16.57■□□□□ 0.24
TRBV7-6-201ENST00000390374 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
TRBV7-6-201ENST00000390374 CYB5RLQ6IPT4 315 aa16.53■□□□□ 0.24
TRBV7-6-201ENST00000390374 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
TRBV7-6-201ENST00000390374 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
TRBV7-6-201ENST00000390374 ERCC6L2Q5T890 1561 aa16.43■□□□□ 0.22
TRBV7-6-201ENST00000390374 IGF1RP08069 1367 aa16.41■□□□□ 0.22
TRBV7-6-201ENST00000390374 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
TRBV7-6-201ENST00000390374 CUL7Q14999 1698 aa16.4■□□□□ 0.22
TRBV7-6-201ENST00000390374 PRG4Q92954 1404 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms