RNA–Protein interactions for RNA: ENST00000390373.2

TRBV6-7-201, Transcript of T cell receptor beta variable 6-7 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRBV6-7, Length 344 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7-201ENST00000390373 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
TRBV6-7-201ENST00000390373 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
TRBV6-7-201ENST00000390373 ABCC9O60706 1549 aa15.02□□□□□ -0.01
TRBV6-7-201ENST00000390373 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
TRBV6-7-201ENST00000390373 NACADO15069 1562 aa14.3□□□□□ -0.12
TRBV6-7-201ENST00000390373 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
TRBV6-7-201ENST00000390373 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
TRBV6-7-201ENST00000390373 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
TRBV6-7-201ENST00000390373 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
TRBV6-7-201ENST00000390373 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
TRBV6-7-201ENST00000390373 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
TRBV6-7-201ENST00000390373 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRBV6-7-201ENST00000390373 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
TRBV6-7-201ENST00000390373 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
TRBV6-7-201ENST00000390373 SHROOM4Q9ULL8 1493 aa13.77□□□□□ -0.21
TRBV6-7-201ENST00000390373 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
TRBV6-7-201ENST00000390373 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
TRBV6-7-201ENST00000390373 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
TRBV6-7-201ENST00000390373 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
TRBV6-7-201ENST00000390373 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
TRBV6-7-201ENST00000390373 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
TRBV6-7-201ENST00000390373 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
TRBV6-7-201ENST00000390373 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
TRBV6-7-201ENST00000390373 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
TRBV6-7-201ENST00000390373 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
TRBV6-7-201ENST00000390373 MROH2BQ7Z745 1585 aa13.09□□□□□ -0.31
TRBV6-7-201ENST00000390373 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
TRBV6-7-201ENST00000390373 WIZO95785 1651 aa12.98□□□□□ -0.33
TRBV6-7-201ENST00000390373 NESP48681 1621 aa12.95□□□□□ -0.34
TRBV6-7-201ENST00000390373 ERCC6Q03468 1493 aa12.93□□□□□ -0.34
TRBV6-7-201ENST00000390373 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
TRBV6-7-201ENST00000390373 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
TRBV6-7-201ENST00000390373 CUX2O14529 1486 aa12.86□□□□□ -0.35
TRBV6-7-201ENST00000390373 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
TRBV6-7-201ENST00000390373 RSF1Q96T23 1441 aaPredicted RBP12.83□□□□□ -0.36
TRBV6-7-201ENST00000390373 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
TRBV6-7-201ENST00000390373 CADPSQ9ULU8 1353 aa12.74□□□□□ -0.37
TRBV6-7-201ENST00000390373 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
TRBV6-7-201ENST00000390373 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
TRBV6-7-201ENST00000390373 WDR62O43379 1518 aa12.67□□□□□ -0.38
TRBV6-7-201ENST00000390373 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
TRBV6-7-201ENST00000390373 CFTRP13569 1480 aa12.66□□□□□ -0.38
TRBV6-7-201ENST00000390373 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
TRBV6-7-201ENST00000390373 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
TRBV6-7-201ENST00000390373 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
TRBV6-7-201ENST00000390373 DNAJC5Q9H3Z4 198 aa12.6□□□□□ -0.39
TRBV6-7-201ENST00000390373 URB2Q14146 1524 aaKnown RBP12.56□□□□□ -0.4
TRBV6-7-201ENST00000390373 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
TRBV6-7-201ENST00000390373 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
TRBV6-7-201ENST00000390373 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
TRBV6-7-201ENST00000390373 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
TRBV6-7-201ENST00000390373 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
TRBV6-7-201ENST00000390373 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
TRBV6-7-201ENST00000390373 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
TRBV6-7-201ENST00000390373 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
TRBV6-7-201ENST00000390373 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
TRBV6-7-201ENST00000390373 CUX1P39880 1505 aa12.3□□□□□ -0.44
TRBV6-7-201ENST00000390373 CHD1O14646 1710 aa12.28□□□□□ -0.44
TRBV6-7-201ENST00000390373 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
TRBV6-7-201ENST00000390373 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.44
TRBV6-7-201ENST00000390373 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
TRBV6-7-201ENST00000390373 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRBV6-7-201ENST00000390373 PBRM1Q86U86 1689 aa12.21□□□□□ -0.45
TRBV6-7-201ENST00000390373 SOGA1O94964 1423 aa12.2□□□□□ -0.46
TRBV6-7-201ENST00000390373 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
TRBV6-7-201ENST00000390373 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
TRBV6-7-201ENST00000390373 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
TRBV6-7-201ENST00000390373 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
TRBV6-7-201ENST00000390373 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
TRBV6-7-201ENST00000390373 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
TRBV6-7-201ENST00000390373 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
TRBV6-7-201ENST00000390373 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
TRBV6-7-201ENST00000390373 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
TRBV6-7-201ENST00000390373 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
TRBV6-7-201ENST00000390373 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
TRBV6-7-201ENST00000390373 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
TRBV6-7-201ENST00000390373 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
TRBV6-7-201ENST00000390373 GRIN2BQ13224 1484 aa12.12□□□□□ -0.47
TRBV6-7-201ENST00000390373 MAGI1Q96QZ7 1491 aaPredicted RBP12.12□□□□□ -0.47
TRBV6-7-201ENST00000390373 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
TRBV6-7-201ENST00000390373 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
TRBV6-7-201ENST00000390373 CLASP1Q7Z460 1538 aa12.09□□□□□ -0.47
TRBV6-7-201ENST00000390373 FBLN2P98095 1184 aa12.07□□□□□ -0.48
TRBV6-7-201ENST00000390373 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
TRBV6-7-201ENST00000390373 ADAMTS12P58397 1594 aa12.06□□□□□ -0.48
TRBV6-7-201ENST00000390373 ARAP1Q96P48 1450 aa12.02□□□□□ -0.48
TRBV6-7-201ENST00000390373 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
TRBV6-7-201ENST00000390373 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
TRBV6-7-201ENST00000390373 CEP170Q5SW79 1584 aa11.98□□□□□ -0.49
TRBV6-7-201ENST00000390373 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
TRBV6-7-201ENST00000390373 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
TRBV6-7-201ENST00000390373 NUP160Q12769 1436 aa11.93□□□□□ -0.5
TRBV6-7-201ENST00000390373 SHROOM2Q13796 1616 aa11.93□□□□□ -0.5
TRBV6-7-201ENST00000390373 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
TRBV6-7-201ENST00000390373 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
TRBV6-7-201ENST00000390373 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
TRBV6-7-201ENST00000390373 CUL7Q14999 1698 aa11.89□□□□□ -0.51
TRBV6-7-201ENST00000390373 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
TRBV6-7-201ENST00000390373 IGF1RP08069 1367 aa11.79□□□□□ -0.52
TRBV6-7-201ENST00000390373 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms