RNA–Protein interactions for RNA: ENST00000390372.3

TRBV5-5-201, Transcript of T cell receptor beta variable 5-5, humanhuman

APPRIS P1 BASIC

Gene TRBV5-5, Length 350 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5-201ENST00000390372 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
TRBV5-5-201ENST00000390372 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
TRBV5-5-201ENST00000390372 ABCC9O60706 1549 aa23.23■■□□□ 1.31
TRBV5-5-201ENST00000390372 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
TRBV5-5-201ENST00000390372 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
TRBV5-5-201ENST00000390372 NACADO15069 1562 aa22.3■■□□□ 1.16
TRBV5-5-201ENST00000390372 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
TRBV5-5-201ENST00000390372 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
TRBV5-5-201ENST00000390372 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
TRBV5-5-201ENST00000390372 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
TRBV5-5-201ENST00000390372 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.07
TRBV5-5-201ENST00000390372 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
TRBV5-5-201ENST00000390372 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
TRBV5-5-201ENST00000390372 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
TRBV5-5-201ENST00000390372 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
TRBV5-5-201ENST00000390372 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
TRBV5-5-201ENST00000390372 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
TRBV5-5-201ENST00000390372 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
TRBV5-5-201ENST00000390372 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
TRBV5-5-201ENST00000390372 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
TRBV5-5-201ENST00000390372 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
TRBV5-5-201ENST00000390372 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
TRBV5-5-201ENST00000390372 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
TRBV5-5-201ENST00000390372 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
TRBV5-5-201ENST00000390372 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
TRBV5-5-201ENST00000390372 PEG3Q9GZU2 1588 aa20.44■□□□□ 0.86
TRBV5-5-201ENST00000390372 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
TRBV5-5-201ENST00000390372 WIZO95785 1651 aa20.22■□□□□ 0.83
TRBV5-5-201ENST00000390372 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
TRBV5-5-201ENST00000390372 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
TRBV5-5-201ENST00000390372 LAMC3Q9Y6N6 1575 aa20.05■□□□□ 0.8
TRBV5-5-201ENST00000390372 NESP48681 1621 aa20.05■□□□□ 0.8
TRBV5-5-201ENST00000390372 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
TRBV5-5-201ENST00000390372 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
TRBV5-5-201ENST00000390372 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
TRBV5-5-201ENST00000390372 CUX2O14529 1486 aa19.89■□□□□ 0.77
TRBV5-5-201ENST00000390372 CFTRP13569 1480 aa19.83■□□□□ 0.76
TRBV5-5-201ENST00000390372 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
TRBV5-5-201ENST00000390372 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
TRBV5-5-201ENST00000390372 THOC2Q8NI27 1593 aaKnown RBP19.76■□□□□ 0.75
TRBV5-5-201ENST00000390372 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
TRBV5-5-201ENST00000390372 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
TRBV5-5-201ENST00000390372 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
TRBV5-5-201ENST00000390372 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
TRBV5-5-201ENST00000390372 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
TRBV5-5-201ENST00000390372 WDR62O43379 1518 aa19.62■□□□□ 0.73
TRBV5-5-201ENST00000390372 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
TRBV5-5-201ENST00000390372 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
TRBV5-5-201ENST00000390372 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
TRBV5-5-201ENST00000390372 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
TRBV5-5-201ENST00000390372 DNAJC5Q9H3Z4 198 aa19.38■□□□□ 0.69
TRBV5-5-201ENST00000390372 IFT140Q96RY7 1462 aa19.34■□□□□ 0.69
TRBV5-5-201ENST00000390372 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
TRBV5-5-201ENST00000390372 CUX1P39880 1505 aa19.2■□□□□ 0.66
TRBV5-5-201ENST00000390372 SOGA1O94964 1423 aa19.19■□□□□ 0.66
TRBV5-5-201ENST00000390372 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
TRBV5-5-201ENST00000390372 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
TRBV5-5-201ENST00000390372 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
TRBV5-5-201ENST00000390372 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
TRBV5-5-201ENST00000390372 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
TRBV5-5-201ENST00000390372 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
TRBV5-5-201ENST00000390372 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
TRBV5-5-201ENST00000390372 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
TRBV5-5-201ENST00000390372 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
TRBV5-5-201ENST00000390372 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
TRBV5-5-201ENST00000390372 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
TRBV5-5-201ENST00000390372 BIVM-ERCC5R4GMW8 1640 aa19.02■□□□□ 0.64
TRBV5-5-201ENST00000390372 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
TRBV5-5-201ENST00000390372 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
TRBV5-5-201ENST00000390372 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
TRBV5-5-201ENST00000390372 FBLN2P98095 1184 aa18.96■□□□□ 0.63
TRBV5-5-201ENST00000390372 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
TRBV5-5-201ENST00000390372 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
TRBV5-5-201ENST00000390372 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
TRBV5-5-201ENST00000390372 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
TRBV5-5-201ENST00000390372 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
TRBV5-5-201ENST00000390372 CHD1O14646 1710 aa18.87■□□□□ 0.61
TRBV5-5-201ENST00000390372 PBRM1Q86U86 1689 aa18.86■□□□□ 0.61
TRBV5-5-201ENST00000390372 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
TRBV5-5-201ENST00000390372 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
TRBV5-5-201ENST00000390372 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
TRBV5-5-201ENST00000390372 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
TRBV5-5-201ENST00000390372 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
TRBV5-5-201ENST00000390372 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
TRBV5-5-201ENST00000390372 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
TRBV5-5-201ENST00000390372 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
TRBV5-5-201ENST00000390372 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
TRBV5-5-201ENST00000390372 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
TRBV5-5-201ENST00000390372 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
TRBV5-5-201ENST00000390372 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
TRBV5-5-201ENST00000390372 IGF1RP08069 1367 aa18.63■□□□□ 0.57
TRBV5-5-201ENST00000390372 NUP160Q12769 1436 aa18.61■□□□□ 0.57
TRBV5-5-201ENST00000390372 CUL7Q14999 1698 aa18.6■□□□□ 0.57
TRBV5-5-201ENST00000390372 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
TRBV5-5-201ENST00000390372 CEP170Q5SW79 1584 aa18.58■□□□□ 0.56
TRBV5-5-201ENST00000390372 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
TRBV5-5-201ENST00000390372 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
TRBV5-5-201ENST00000390372 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
TRBV5-5-201ENST00000390372 SHROOM2Q13796 1616 aa18.46■□□□□ 0.55
TRBV5-5-201ENST00000390372 KIAA0586Q9BVV6 1533 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms