RNA–Protein interactions for RNA: ENST00000390371.3

TRBV6-6-201, Transcript of T cell receptor beta variable 6-6, humanhuman

APPRIS P1 BASIC

Gene TRBV6-6, Length 388 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6-201ENST00000390371 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
TRBV6-6-201ENST00000390371 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
TRBV6-6-201ENST00000390371 ABCC9O60706 1549 aa15.02□□□□□ -0.01
TRBV6-6-201ENST00000390371 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
TRBV6-6-201ENST00000390371 ZCCHC6Q5VYS8 1495 aaKnown RBP14.77□□□□□ -0.04
TRBV6-6-201ENST00000390371 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
TRBV6-6-201ENST00000390371 DCAF8L2P0C7V8 631 aa14.69□□□□□ -0.06
TRBV6-6-201ENST00000390371 NACADO15069 1562 aa14.5□□□□□ -0.09
TRBV6-6-201ENST00000390371 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
TRBV6-6-201ENST00000390371 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRBV6-6-201ENST00000390371 SHROOM4Q9ULL8 1493 aa14□□□□□ -0.17
TRBV6-6-201ENST00000390371 SCRIBQ14160 1630 aa13.96□□□□□ -0.17
TRBV6-6-201ENST00000390371 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
TRBV6-6-201ENST00000390371 BICRAQ9NZM4 1560 aa13.86□□□□□ -0.19
TRBV6-6-201ENST00000390371 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
TRBV6-6-201ENST00000390371 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
TRBV6-6-201ENST00000390371 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
TRBV6-6-201ENST00000390371 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
TRBV6-6-201ENST00000390371 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
TRBV6-6-201ENST00000390371 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
TRBV6-6-201ENST00000390371 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
TRBV6-6-201ENST00000390371 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
TRBV6-6-201ENST00000390371 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
TRBV6-6-201ENST00000390371 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
TRBV6-6-201ENST00000390371 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
TRBV6-6-201ENST00000390371 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
TRBV6-6-201ENST00000390371 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
TRBV6-6-201ENST00000390371 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
TRBV6-6-201ENST00000390371 WIZO95785 1651 aa13.32□□□□□ -0.28
TRBV6-6-201ENST00000390371 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
TRBV6-6-201ENST00000390371 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
TRBV6-6-201ENST00000390371 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
TRBV6-6-201ENST00000390371 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
TRBV6-6-201ENST00000390371 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
TRBV6-6-201ENST00000390371 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
TRBV6-6-201ENST00000390371 CFTRP13569 1480 aa12.97□□□□□ -0.33
TRBV6-6-201ENST00000390371 NESP48681 1621 aa12.96□□□□□ -0.33
TRBV6-6-201ENST00000390371 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
TRBV6-6-201ENST00000390371 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
TRBV6-6-201ENST00000390371 CHIC1Q5VXU3 224 aa12.84□□□□□ -0.35
TRBV6-6-201ENST00000390371 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
TRBV6-6-201ENST00000390371 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
TRBV6-6-201ENST00000390371 CUX2O14529 1486 aa12.77□□□□□ -0.37
TRBV6-6-201ENST00000390371 WRNQ14191 1432 aaPredicted RBP eCLIP12.76□□□□□ -0.37
TRBV6-6-201ENST00000390371 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
TRBV6-6-201ENST00000390371 BIVM-ERCC5R4GMW8 1640 aa12.75□□□□□ -0.37
TRBV6-6-201ENST00000390371 TOP2BQ02880 1626 aa12.74□□□□□ -0.37
TRBV6-6-201ENST00000390371 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
TRBV6-6-201ENST00000390371 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
TRBV6-6-201ENST00000390371 EEA1Q15075 1411 aa12.71□□□□□ -0.37
TRBV6-6-201ENST00000390371 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
TRBV6-6-201ENST00000390371 KIF21AQ7Z4S6 1674 aa12.64□□□□□ -0.39
TRBV6-6-201ENST00000390371 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
TRBV6-6-201ENST00000390371 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
TRBV6-6-201ENST00000390371 CUX1P39880 1505 aa12.62□□□□□ -0.39
TRBV6-6-201ENST00000390371 THOC2Q8NI27 1593 aaKnown RBP12.61□□□□□ -0.39
TRBV6-6-201ENST00000390371 WDR62O43379 1518 aa12.6□□□□□ -0.39
TRBV6-6-201ENST00000390371 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
TRBV6-6-201ENST00000390371 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
TRBV6-6-201ENST00000390371 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
TRBV6-6-201ENST00000390371 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
TRBV6-6-201ENST00000390371 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
TRBV6-6-201ENST00000390371 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
TRBV6-6-201ENST00000390371 IFT140Q96RY7 1462 aa12.5□□□□□ -0.41
TRBV6-6-201ENST00000390371 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
TRBV6-6-201ENST00000390371 SOGA1O94964 1423 aa12.49□□□□□ -0.41
TRBV6-6-201ENST00000390371 KIF21BO75037 1637 aa12.45□□□□□ -0.42
TRBV6-6-201ENST00000390371 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
TRBV6-6-201ENST00000390371 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
TRBV6-6-201ENST00000390371 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
TRBV6-6-201ENST00000390371 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
TRBV6-6-201ENST00000390371 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
TRBV6-6-201ENST00000390371 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
TRBV6-6-201ENST00000390371 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRBV6-6-201ENST00000390371 FBLN2P98095 1184 aa12.42□□□□□ -0.42
TRBV6-6-201ENST00000390371 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
TRBV6-6-201ENST00000390371 CUL7Q14999 1698 aa12.41□□□□□ -0.42
TRBV6-6-201ENST00000390371 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
TRBV6-6-201ENST00000390371 PRXQ9BXM0 1461 aa12.39□□□□□ -0.43
TRBV6-6-201ENST00000390371 GOLGA3Q08378 1498 aa12.37□□□□□ -0.43
TRBV6-6-201ENST00000390371 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
TRBV6-6-201ENST00000390371 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
TRBV6-6-201ENST00000390371 IGF1RP08069 1367 aa12.33□□□□□ -0.44
TRBV6-6-201ENST00000390371 TNIKQ9UKE5 1360 aa12.32□□□□□ -0.44
TRBV6-6-201ENST00000390371 RUSC2Q8N2Y8 1516 aa12.31□□□□□ -0.44
TRBV6-6-201ENST00000390371 GRIN2BQ13224 1484 aa12.3□□□□□ -0.44
TRBV6-6-201ENST00000390371 RAPGEF2Q9Y4G8 1499 aa12.29□□□□□ -0.44
TRBV6-6-201ENST00000390371 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
TRBV6-6-201ENST00000390371 CARMIL1Q5VZK9 1371 aa12.28□□□□□ -0.44
TRBV6-6-201ENST00000390371 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.44
TRBV6-6-201ENST00000390371 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
TRBV6-6-201ENST00000390371 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
TRBV6-6-201ENST00000390371 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
TRBV6-6-201ENST00000390371 FAM9AQ8IZU1 332 aaPredicted RBP12.21□□□□□ -0.45
TRBV6-6-201ENST00000390371 ADAMTS12P58397 1594 aa12.21□□□□□ -0.46
TRBV6-6-201ENST00000390371 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
TRBV6-6-201ENST00000390371 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
TRBV6-6-201ENST00000390371 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
TRBV6-6-201ENST00000390371 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
TRBV6-6-201ENST00000390371 UBTFP17480 764 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms