RNA–Protein interactions for RNA: ENST00000390368.2

TRBV6-5-201, Transcript of T cell receptor beta variable 6-5, humanhuman

APPRIS P1 BASIC

Gene TRBV6-5, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5-201ENST00000390368 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
TRBV6-5-201ENST00000390368 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
TRBV6-5-201ENST00000390368 ABCC9O60706 1549 aa21.4■■□□□ 1.02
TRBV6-5-201ENST00000390368 RB1CC1Q8TDY2 1594 aa20.57■□□□□ 0.88
TRBV6-5-201ENST00000390368 NACADO15069 1562 aa20.53■□□□□ 0.88
TRBV6-5-201ENST00000390368 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
TRBV6-5-201ENST00000390368 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
TRBV6-5-201ENST00000390368 MYO15BQ96JP2 1530 aa20.39■□□□□ 0.85
TRBV6-5-201ENST00000390368 DCAF1Q9Y4B6 1507 aa20.29■□□□□ 0.84
TRBV6-5-201ENST00000390368 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
TRBV6-5-201ENST00000390368 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
TRBV6-5-201ENST00000390368 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
TRBV6-5-201ENST00000390368 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
TRBV6-5-201ENST00000390368 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
TRBV6-5-201ENST00000390368 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
TRBV6-5-201ENST00000390368 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
TRBV6-5-201ENST00000390368 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
TRBV6-5-201ENST00000390368 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
TRBV6-5-201ENST00000390368 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
TRBV6-5-201ENST00000390368 BAZ1AQ9NRL2 1556 aaPredicted RBP19.01■□□□□ 0.63
TRBV6-5-201ENST00000390368 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
TRBV6-5-201ENST00000390368 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
TRBV6-5-201ENST00000390368 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
TRBV6-5-201ENST00000390368 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
TRBV6-5-201ENST00000390368 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.61
TRBV6-5-201ENST00000390368 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
TRBV6-5-201ENST00000390368 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.59
TRBV6-5-201ENST00000390368 WIZO95785 1651 aa18.76■□□□□ 0.59
TRBV6-5-201ENST00000390368 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
TRBV6-5-201ENST00000390368 NESP48681 1621 aa18.54■□□□□ 0.56
TRBV6-5-201ENST00000390368 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
TRBV6-5-201ENST00000390368 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
TRBV6-5-201ENST00000390368 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
TRBV6-5-201ENST00000390368 KIF21AQ7Z4S6 1674 aa18.37■□□□□ 0.53
TRBV6-5-201ENST00000390368 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
TRBV6-5-201ENST00000390368 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
TRBV6-5-201ENST00000390368 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
TRBV6-5-201ENST00000390368 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
TRBV6-5-201ENST00000390368 CUX2O14529 1486 aa18.26■□□□□ 0.51
TRBV6-5-201ENST00000390368 CFTRP13569 1480 aa18.26■□□□□ 0.51
TRBV6-5-201ENST00000390368 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
TRBV6-5-201ENST00000390368 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
TRBV6-5-201ENST00000390368 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.5
TRBV6-5-201ENST00000390368 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
TRBV6-5-201ENST00000390368 WDR62O43379 1518 aa18.11■□□□□ 0.49
TRBV6-5-201ENST00000390368 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
TRBV6-5-201ENST00000390368 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
TRBV6-5-201ENST00000390368 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
TRBV6-5-201ENST00000390368 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
TRBV6-5-201ENST00000390368 ABCC8Q09428 1581 aa17.84■□□□□ 0.45
TRBV6-5-201ENST00000390368 CUX1P39880 1505 aa17.76■□□□□ 0.43
TRBV6-5-201ENST00000390368 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
TRBV6-5-201ENST00000390368 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
TRBV6-5-201ENST00000390368 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
TRBV6-5-201ENST00000390368 POLA1P09884 1462 aaPredicted RBP17.74■□□□□ 0.43
TRBV6-5-201ENST00000390368 ZNF608Q9ULD9 1512 aaPredicted RBP17.72■□□□□ 0.43
TRBV6-5-201ENST00000390368 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
TRBV6-5-201ENST00000390368 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
TRBV6-5-201ENST00000390368 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
TRBV6-5-201ENST00000390368 SOGA1O94964 1423 aa17.63■□□□□ 0.41
TRBV6-5-201ENST00000390368 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
TRBV6-5-201ENST00000390368 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
TRBV6-5-201ENST00000390368 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
TRBV6-5-201ENST00000390368 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
TRBV6-5-201ENST00000390368 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRBV6-5-201ENST00000390368 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
TRBV6-5-201ENST00000390368 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
TRBV6-5-201ENST00000390368 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
TRBV6-5-201ENST00000390368 CHD1O14646 1710 aa17.5■□□□□ 0.39
TRBV6-5-201ENST00000390368 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
TRBV6-5-201ENST00000390368 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
TRBV6-5-201ENST00000390368 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
TRBV6-5-201ENST00000390368 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
TRBV6-5-201ENST00000390368 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
TRBV6-5-201ENST00000390368 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
TRBV6-5-201ENST00000390368 MAGI1Q96QZ7 1491 aaPredicted RBP17.4■□□□□ 0.38
TRBV6-5-201ENST00000390368 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
TRBV6-5-201ENST00000390368 FBLN2P98095 1184 aa17.33■□□□□ 0.36
TRBV6-5-201ENST00000390368 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
TRBV6-5-201ENST00000390368 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
TRBV6-5-201ENST00000390368 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
TRBV6-5-201ENST00000390368 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
TRBV6-5-201ENST00000390368 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
TRBV6-5-201ENST00000390368 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
TRBV6-5-201ENST00000390368 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
TRBV6-5-201ENST00000390368 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
TRBV6-5-201ENST00000390368 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
TRBV6-5-201ENST00000390368 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.35
TRBV6-5-201ENST00000390368 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
TRBV6-5-201ENST00000390368 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
TRBV6-5-201ENST00000390368 NUP160Q12769 1436 aa17.16■□□□□ 0.34
TRBV6-5-201ENST00000390368 CUL7Q14999 1698 aa17.15■□□□□ 0.34
TRBV6-5-201ENST00000390368 IGF1RP08069 1367 aa17.15■□□□□ 0.34
TRBV6-5-201ENST00000390368 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
TRBV6-5-201ENST00000390368 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
TRBV6-5-201ENST00000390368 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
TRBV6-5-201ENST00000390368 SHROOM2Q13796 1616 aa17.08■□□□□ 0.32
TRBV6-5-201ENST00000390368 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
TRBV6-5-201ENST00000390368 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
TRBV6-5-201ENST00000390368 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms