RNA–Protein interactions for RNA: ENST00000390364.3

TRBV10-1-201, Transcript of T cell receptor beta variable 10-1(gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRBV10-1, Length 412 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1-201ENST00000390364 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
TRBV10-1-201ENST00000390364 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
TRBV10-1-201ENST00000390364 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
TRBV10-1-201ENST00000390364 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
TRBV10-1-201ENST00000390364 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
TRBV10-1-201ENST00000390364 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
TRBV10-1-201ENST00000390364 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
TRBV10-1-201ENST00000390364 ABCC9O60706 1549 aa16.09■□□□□ 0.17
TRBV10-1-201ENST00000390364 NACADO15069 1562 aa15.99■□□□□ 0.15
TRBV10-1-201ENST00000390364 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
TRBV10-1-201ENST00000390364 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
TRBV10-1-201ENST00000390364 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
TRBV10-1-201ENST00000390364 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
TRBV10-1-201ENST00000390364 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
TRBV10-1-201ENST00000390364 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
TRBV10-1-201ENST00000390364 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.04
TRBV10-1-201ENST00000390364 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.03
TRBV10-1-201ENST00000390364 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRBV10-1-201ENST00000390364 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.03
TRBV10-1-201ENST00000390364 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
TRBV10-1-201ENST00000390364 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
TRBV10-1-201ENST00000390364 WIZO95785 1651 aa15.07■□□□□ 0
TRBV10-1-201ENST00000390364 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
TRBV10-1-201ENST00000390364 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
TRBV10-1-201ENST00000390364 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
TRBV10-1-201ENST00000390364 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
TRBV10-1-201ENST00000390364 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
TRBV10-1-201ENST00000390364 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
TRBV10-1-201ENST00000390364 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
TRBV10-1-201ENST00000390364 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
TRBV10-1-201ENST00000390364 AEBP2Q6ZN18 517 aaPredicted RBP14.79□□□□□ -0.04
TRBV10-1-201ENST00000390364 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
TRBV10-1-201ENST00000390364 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
TRBV10-1-201ENST00000390364 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
TRBV10-1-201ENST00000390364 FAM9AQ8IZU1 332 aaPredicted RBP14.57□□□□□ -0.08
TRBV10-1-201ENST00000390364 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
TRBV10-1-201ENST00000390364 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.08
TRBV10-1-201ENST00000390364 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
TRBV10-1-201ENST00000390364 EEA1Q15075 1411 aa14.49□□□□□ -0.09
TRBV10-1-201ENST00000390364 CFTRP13569 1480 aa14.44□□□□□ -0.1
TRBV10-1-201ENST00000390364 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
TRBV10-1-201ENST00000390364 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
TRBV10-1-201ENST00000390364 SOGA1O94964 1423 aa14.34□□□□□ -0.11
TRBV10-1-201ENST00000390364 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
TRBV10-1-201ENST00000390364 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
TRBV10-1-201ENST00000390364 TOP2BQ02880 1626 aa14.32□□□□□ -0.12
TRBV10-1-201ENST00000390364 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
TRBV10-1-201ENST00000390364 PRDM2Q13029 1718 aa14.27□□□□□ -0.12
TRBV10-1-201ENST00000390364 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
TRBV10-1-201ENST00000390364 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
TRBV10-1-201ENST00000390364 GOLGA3Q08378 1498 aa14.23□□□□□ -0.13
TRBV10-1-201ENST00000390364 CUX1P39880 1505 aa14.22□□□□□ -0.13
TRBV10-1-201ENST00000390364 RUSC2Q8N2Y8 1516 aa14.22□□□□□ -0.13
TRBV10-1-201ENST00000390364 FANCD2Q9BXW9 1451 aa14.22□□□□□ -0.13
TRBV10-1-201ENST00000390364 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
TRBV10-1-201ENST00000390364 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
TRBV10-1-201ENST00000390364 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
TRBV10-1-201ENST00000390364 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
TRBV10-1-201ENST00000390364 TRIM26Q12899 539 aaPredicted RBP14.17□□□□□ -0.14
TRBV10-1-201ENST00000390364 KIF21BO75037 1637 aa14.15□□□□□ -0.14
TRBV10-1-201ENST00000390364 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
TRBV10-1-201ENST00000390364 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
TRBV10-1-201ENST00000390364 NESP48681 1621 aa14.11□□□□□ -0.15
TRBV10-1-201ENST00000390364 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
TRBV10-1-201ENST00000390364 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
TRBV10-1-201ENST00000390364 CUX2O14529 1486 aa14.06□□□□□ -0.16
TRBV10-1-201ENST00000390364 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
TRBV10-1-201ENST00000390364 PRXQ9BXM0 1461 aa14.05□□□□□ -0.16
TRBV10-1-201ENST00000390364 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
TRBV10-1-201ENST00000390364 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
TRBV10-1-201ENST00000390364 RAPGEF2Q9Y4G8 1499 aa14.03□□□□□ -0.16
TRBV10-1-201ENST00000390364 CLIP1P30622 1438 aa14.02□□□□□ -0.16
TRBV10-1-201ENST00000390364 IGF1RP08069 1367 aa14.01□□□□□ -0.17
TRBV10-1-201ENST00000390364 APLP2Q06481 763 aa14□□□□□ -0.17
TRBV10-1-201ENST00000390364 ABCA10Q8WWZ4 1543 aa13.98□□□□□ -0.17
TRBV10-1-201ENST00000390364 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
TRBV10-1-201ENST00000390364 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
TRBV10-1-201ENST00000390364 URB2Q14146 1524 aaKnown RBP13.96□□□□□ -0.17
TRBV10-1-201ENST00000390364 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
TRBV10-1-201ENST00000390364 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
TRBV10-1-201ENST00000390364 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
TRBV10-1-201ENST00000390364 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
TRBV10-1-201ENST00000390364 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.19
TRBV10-1-201ENST00000390364 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
TRBV10-1-201ENST00000390364 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
TRBV10-1-201ENST00000390364 HRCP23327 699 aa13.86□□□□□ -0.19
TRBV10-1-201ENST00000390364 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
TRBV10-1-201ENST00000390364 CUL7Q14999 1698 aa13.85□□□□□ -0.19
TRBV10-1-201ENST00000390364 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
TRBV10-1-201ENST00000390364 ZEB1P37275 1124 aaPredicted RBP13.81□□□□□ -0.2
TRBV10-1-201ENST00000390364 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
TRBV10-1-201ENST00000390364 WDR62O43379 1518 aa13.79□□□□□ -0.2
TRBV10-1-201ENST00000390364 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
TRBV10-1-201ENST00000390364 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
TRBV10-1-201ENST00000390364 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
TRBV10-1-201ENST00000390364 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
TRBV10-1-201ENST00000390364 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
TRBV10-1-201ENST00000390364 ARHGAP35Q9NRY4 1499 aa13.74□□□□□ -0.21
TRBV10-1-201ENST00000390364 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
TRBV10-1-201ENST00000390364 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms