RNA–Protein interactions for RNA: ENST00000390278.3

IGKV1D-42-201, Transcript of immunoglobulin kappa variable 1D-42 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGKV1D-42, Length 373 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-42-201ENST00000390278 NISCHQ9Y2I1 1504 aa25.41■■□□□ 1.66
IGKV1D-42-201ENST00000390278 ABCC9O60706 1549 aa22.89■■□□□ 1.26
IGKV1D-42-201ENST00000390278 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
IGKV1D-42-201ENST00000390278 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
IGKV1D-42-201ENST00000390278 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
IGKV1D-42-201ENST00000390278 NACADO15069 1562 aa21.55■■□□□ 1.04
IGKV1D-42-201ENST00000390278 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
IGKV1D-42-201ENST00000390278 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
IGKV1D-42-201ENST00000390278 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
IGKV1D-42-201ENST00000390278 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
IGKV1D-42-201ENST00000390278 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
IGKV1D-42-201ENST00000390278 ZCCHC6Q5VYS8 1495 aaKnown RBP21.06■□□□□ 0.96
IGKV1D-42-201ENST00000390278 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
IGKV1D-42-201ENST00000390278 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
IGKV1D-42-201ENST00000390278 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
IGKV1D-42-201ENST00000390278 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
IGKV1D-42-201ENST00000390278 EIF4G1Q04637 1599 aaKnown RBP20.61■□□□□ 0.89
IGKV1D-42-201ENST00000390278 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
IGKV1D-42-201ENST00000390278 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
IGKV1D-42-201ENST00000390278 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
IGKV1D-42-201ENST00000390278 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
IGKV1D-42-201ENST00000390278 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
IGKV1D-42-201ENST00000390278 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
IGKV1D-42-201ENST00000390278 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
IGKV1D-42-201ENST00000390278 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
IGKV1D-42-201ENST00000390278 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
IGKV1D-42-201ENST00000390278 NESP48681 1621 aa19.69■□□□□ 0.74
IGKV1D-42-201ENST00000390278 CUX2O14529 1486 aa19.67■□□□□ 0.74
IGKV1D-42-201ENST00000390278 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
IGKV1D-42-201ENST00000390278 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
IGKV1D-42-201ENST00000390278 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
IGKV1D-42-201ENST00000390278 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
IGKV1D-42-201ENST00000390278 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
IGKV1D-42-201ENST00000390278 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
IGKV1D-42-201ENST00000390278 WIZO95785 1651 aa19.41■□□□□ 0.7
IGKV1D-42-201ENST00000390278 PDS5BQ9NTI5 1447 aa19.31■□□□□ 0.68
IGKV1D-42-201ENST00000390278 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
IGKV1D-42-201ENST00000390278 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
IGKV1D-42-201ENST00000390278 WDR62O43379 1518 aa19.16■□□□□ 0.66
IGKV1D-42-201ENST00000390278 RSF1Q96T23 1441 aaPredicted RBP19.16■□□□□ 0.66
IGKV1D-42-201ENST00000390278 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
IGKV1D-42-201ENST00000390278 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
IGKV1D-42-201ENST00000390278 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
IGKV1D-42-201ENST00000390278 CFTRP13569 1480 aa19.07■□□□□ 0.64
IGKV1D-42-201ENST00000390278 URB2Q14146 1524 aaKnown RBP18.98■□□□□ 0.63
IGKV1D-42-201ENST00000390278 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
IGKV1D-42-201ENST00000390278 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
IGKV1D-42-201ENST00000390278 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
IGKV1D-42-201ENST00000390278 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
IGKV1D-42-201ENST00000390278 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
IGKV1D-42-201ENST00000390278 OSCARQ8IYS5 282 aa18.74■□□□□ 0.59
IGKV1D-42-201ENST00000390278 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
IGKV1D-42-201ENST00000390278 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
IGKV1D-42-201ENST00000390278 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
IGKV1D-42-201ENST00000390278 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
IGKV1D-42-201ENST00000390278 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
IGKV1D-42-201ENST00000390278 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
IGKV1D-42-201ENST00000390278 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
IGKV1D-42-201ENST00000390278 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
IGKV1D-42-201ENST00000390278 CHD1O14646 1710 aa18.56■□□□□ 0.56
IGKV1D-42-201ENST00000390278 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.56
IGKV1D-42-201ENST00000390278 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
IGKV1D-42-201ENST00000390278 ARHGEF11O15085 1522 aa18.52■□□□□ 0.56
IGKV1D-42-201ENST00000390278 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
IGKV1D-42-201ENST00000390278 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
IGKV1D-42-201ENST00000390278 CUX1P39880 1505 aa18.43■□□□□ 0.54
IGKV1D-42-201ENST00000390278 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
IGKV1D-42-201ENST00000390278 SOGA1O94964 1423 aa18.42■□□□□ 0.54
IGKV1D-42-201ENST00000390278 FBLN2P98095 1184 aa18.39■□□□□ 0.53
IGKV1D-42-201ENST00000390278 SNAPC4Q5SXM2 1469 aa18.36■□□□□ 0.53
IGKV1D-42-201ENST00000390278 CYB5RLQ6IPT4 315 aa18.36■□□□□ 0.53
IGKV1D-42-201ENST00000390278 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
IGKV1D-42-201ENST00000390278 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
IGKV1D-42-201ENST00000390278 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
IGKV1D-42-201ENST00000390278 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
IGKV1D-42-201ENST00000390278 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
IGKV1D-42-201ENST00000390278 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
IGKV1D-42-201ENST00000390278 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
IGKV1D-42-201ENST00000390278 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
IGKV1D-42-201ENST00000390278 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
IGKV1D-42-201ENST00000390278 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
IGKV1D-42-201ENST00000390278 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
IGKV1D-42-201ENST00000390278 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
IGKV1D-42-201ENST00000390278 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
IGKV1D-42-201ENST00000390278 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
IGKV1D-42-201ENST00000390278 BIVM-ERCC5R4GMW8 1640 aa18.12■□□□□ 0.49
IGKV1D-42-201ENST00000390278 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
IGKV1D-42-201ENST00000390278 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
IGKV1D-42-201ENST00000390278 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
IGKV1D-42-201ENST00000390278 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
IGKV1D-42-201ENST00000390278 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
IGKV1D-42-201ENST00000390278 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
IGKV1D-42-201ENST00000390278 NUP160Q12769 1436 aa17.99■□□□□ 0.47
IGKV1D-42-201ENST00000390278 SHROOM2Q13796 1616 aa17.96■□□□□ 0.47
IGKV1D-42-201ENST00000390278 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
IGKV1D-42-201ENST00000390278 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
IGKV1D-42-201ENST00000390278 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
IGKV1D-42-201ENST00000390278 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
IGKV1D-42-201ENST00000390278 KIF13AQ9H1H9 1805 aa17.79■□□□□ 0.44
IGKV1D-42-201ENST00000390278 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms