RNA–Protein interactions for RNA: ENST00000389078.3

H2AFJ-201, Transcript of H2A histone family member J, humanhuman

TSL 3

Gene H2AFJ, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFJ-201ENST00000389078 NISCHQ9Y2I1 1504 aa50■■■■■ 5.59
H2AFJ-201ENST00000389078 ABCC9O60706 1549 aa45.33■■■■■ 4.85
H2AFJ-201ENST00000389078 CCDC180Q9P1Z9 1646 aa44.93■■■■■ 4.78
H2AFJ-201ENST00000389078 RB1CC1Q8TDY2 1594 aa42.99■■■■■ 4.47
H2AFJ-201ENST00000389078 DNAJC5BQ9UF47 199 aa42.9■■■■■ 4.46
H2AFJ-201ENST00000389078 NACADO15069 1562 aa42.64■■■■■ 4.42
H2AFJ-201ENST00000389078 DCAF8L2P0C7V8 631 aa42.35■■■■■ 4.37
H2AFJ-201ENST00000389078 PABPN1Q86U42 306 aaKnown RBP eCLIP42.19■■■■■ 4.34
H2AFJ-201ENST00000389078 MYO15BQ96JP2 1530 aa42■■■■■ 4.31
H2AFJ-201ENST00000389078 UNC13AQ9UPW8 1703 aa41.84■■■■■ 4.29
H2AFJ-201ENST00000389078 BICRAQ9NZM4 1560 aa41.74■■■■■ 4.27
H2AFJ-201ENST00000389078 ZCCHC6Q5VYS8 1495 aaKnown RBP41.35■■■■■ 4.21
H2AFJ-201ENST00000389078 DCAF1Q9Y4B6 1507 aa41.31■■■■■ 4.2
H2AFJ-201ENST00000389078 SHROOM4Q9ULL8 1493 aa41.23■■■■■ 4.19
H2AFJ-201ENST00000389078 CECR2Q9BXF3 1484 aa40.9■■■■■ 4.14
H2AFJ-201ENST00000389078 SCRIBQ14160 1630 aa40.89■■■■■ 4.14
H2AFJ-201ENST00000389078 CC2D2AQ9P2K1 1620 aa40.89■■■■■ 4.14
H2AFJ-201ENST00000389078 EIF4G1Q04637 1599 aaKnown RBP40.75■■■■■ 4.11
H2AFJ-201ENST00000389078 DNAJC5Q9H3Z4 198 aa39.69■■■■□ 3.94
H2AFJ-201ENST00000389078 NCAPD3P42695 1498 aa39.43■■■■□ 3.9
H2AFJ-201ENST00000389078 CUX2O14529 1486 aa39.25■■■■□ 3.87
H2AFJ-201ENST00000389078 ATAD2BQ9ULI0 1458 aa39.22■■■■□ 3.87
H2AFJ-201ENST00000389078 ERCC6Q03468 1493 aa39.17■■■■□ 3.86
H2AFJ-201ENST00000389078 SMARCA2P51531 1590 aa39.06■■■■□ 3.84
H2AFJ-201ENST00000389078 HMGXB3Q12766 1538 aa39.04■■■■□ 3.84
H2AFJ-201ENST00000389078 SMARCA4P51532 1647 aa39.01■■■■□ 3.84
H2AFJ-201ENST00000389078 NESP48681 1621 aa38.83■■■■□ 3.81
H2AFJ-201ENST00000389078 BAZ1AQ9NRL2 1556 aaPredicted RBP38.82■■■■□ 3.8
H2AFJ-201ENST00000389078 BAZ1BQ9UIG0 1483 aaKnown RBP38.79■■■■□ 3.8
H2AFJ-201ENST00000389078 PEG3Q9GZU2 1588 aa38.7■■■■□ 3.79
H2AFJ-201ENST00000389078 LAMC3Q9Y6N6 1575 aa38.51■■■■□ 3.76
H2AFJ-201ENST00000389078 MROH2BQ7Z745 1585 aa38.49■■■■□ 3.75
H2AFJ-201ENST00000389078 THOC2Q8NI27 1593 aaKnown RBP38.47■■■■□ 3.75
H2AFJ-201ENST00000389078 PDS5BQ9NTI5 1447 aa38.37■■■■□ 3.73
H2AFJ-201ENST00000389078 CADPSQ9ULU8 1353 aa38.21■■■■□ 3.71
H2AFJ-201ENST00000389078 KIF21AQ7Z4S6 1674 aa38.2■■■■□ 3.71
H2AFJ-201ENST00000389078 MRC2Q9UBG0 1479 aa38.02■■■■□ 3.68
H2AFJ-201ENST00000389078 WIZO95785 1651 aa37.94■■■■□ 3.66
H2AFJ-201ENST00000389078 WDR62O43379 1518 aa37.92■■■■□ 3.66
H2AFJ-201ENST00000389078 CEP164Q9UPV0 1460 aa37.78■■■■□ 3.64
H2AFJ-201ENST00000389078 FANCD2Q9BXW9 1451 aa37.72■■■■□ 3.63
H2AFJ-201ENST00000389078 TRIM41Q8WV44 630 aa37.72■■■■□ 3.63
H2AFJ-201ENST00000389078 CFTRP13569 1480 aa37.69■■■■□ 3.62
H2AFJ-201ENST00000389078 RSF1Q96T23 1441 aaPredicted RBP37.62■■■■□ 3.61
H2AFJ-201ENST00000389078 TOP2AP11388 1531 aaKnown RBP37.51■■■■□ 3.59
H2AFJ-201ENST00000389078 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
H2AFJ-201ENST00000389078 URB2Q14146 1524 aaKnown RBP37.42■■■■□ 3.58
H2AFJ-201ENST00000389078 CCDC88BA6NC98 1476 aa37.11■■■■□ 3.53
H2AFJ-201ENST00000389078 IFT140Q96RY7 1462 aa37.07■■■■□ 3.53
H2AFJ-201ENST00000389078 PRDM2Q13029 1718 aa37.05■■■■□ 3.52
H2AFJ-201ENST00000389078 ZNF608Q9ULD9 1512 aaPredicted RBP37.03■■■■□ 3.52
H2AFJ-201ENST00000389078 TOPBP1Q92547 1522 aa36.96■■■■□ 3.51
H2AFJ-201ENST00000389078 ABCC8Q09428 1581 aa36.9■■■■□ 3.5
H2AFJ-201ENST00000389078 RIMBP3CA6NJZ7 1639 aa36.86■■■■□ 3.49
H2AFJ-201ENST00000389078 RIMBP3BA6NNM3 1639 aa36.86■■■■□ 3.49
H2AFJ-201ENST00000389078 RIMBP3Q9UFD9 1639 aa36.86■■■■□ 3.49
H2AFJ-201ENST00000389078 ARHGEF11O15085 1522 aa36.78■■■■□ 3.48
H2AFJ-201ENST00000389078 DNMBPQ6XZF7 1577 aa36.77■■■■□ 3.48
H2AFJ-201ENST00000389078 EIF4G3O43432 1585 aaKnown RBP36.74■■■■□ 3.47
H2AFJ-201ENST00000389078 AQRO60306 1485 aaKnown RBP eCLIP36.66■■■■□ 3.46
H2AFJ-201ENST00000389078 TARBP1Q13395 1621 aaKnown RBP36.63■■■■□ 3.45
H2AFJ-201ENST00000389078 CYB5RLQ6IPT4 315 aa36.58■■■■□ 3.45
H2AFJ-201ENST00000389078 POLA1P09884 1462 aaPredicted RBP36.57■■■■□ 3.45
H2AFJ-201ENST00000389078 FBLN2P98095 1184 aa36.49■■■■□ 3.43
H2AFJ-201ENST00000389078 CHD1O14646 1710 aa36.45■■■■□ 3.43
H2AFJ-201ENST00000389078 RAD54L2Q9Y4B4 1467 aa36.43■■■■□ 3.42
H2AFJ-201ENST00000389078 SOGA1O94964 1423 aa36.42■■■■□ 3.42
H2AFJ-201ENST00000389078 TDRD9Q8NDG6 1382 aaKnown RBP36.4■■■■□ 3.42
H2AFJ-201ENST00000389078 ARAP1Q96P48 1450 aa36.39■■■■□ 3.42
H2AFJ-201ENST00000389078 FGD5Q6ZNL6 1462 aa36.28■■■■□ 3.4
H2AFJ-201ENST00000389078 WDR97A6NE52 1622 aa36.26■■■■□ 3.39
H2AFJ-201ENST00000389078 SNAPC4Q5SXM2 1469 aa36.25■■■■□ 3.39
H2AFJ-201ENST00000389078 TRHP20396 242 aaPredicted RBP36.25■■■■□ 3.39
H2AFJ-201ENST00000389078 CHMP7Q8WUX9 453 aaPredicted RBP36.2■■■■□ 3.39
H2AFJ-201ENST00000389078 CUX1P39880 1505 aa36.18■■■■□ 3.38
H2AFJ-201ENST00000389078 MAGI1Q96QZ7 1491 aaPredicted RBP36.18■■■■□ 3.38
H2AFJ-201ENST00000389078 CLASP1Q7Z460 1538 aa36.15■■■■□ 3.38
H2AFJ-201ENST00000389078 GRIN2BQ13224 1484 aa36.14■■■■□ 3.38
H2AFJ-201ENST00000389078 SYNJ1O43426 1573 aa36.09■■■■□ 3.37
H2AFJ-201ENST00000389078 SYNJ2O15056 1496 aa36.06■■■■□ 3.36
H2AFJ-201ENST00000389078 GAPVD1Q14C86 1478 aa35.95■■■■□ 3.35
H2AFJ-201ENST00000389078 ABCA10Q8WWZ4 1543 aa35.88■■■■□ 3.33
H2AFJ-201ENST00000389078 PBRM1Q86U86 1689 aa35.81■■■■□ 3.32
H2AFJ-201ENST00000389078 ABCA5Q8WWZ7 1642 aa35.79■■■■□ 3.32
H2AFJ-201ENST00000389078 WRNQ14191 1432 aaPredicted RBP eCLIP35.68■■■■□ 3.3
H2AFJ-201ENST00000389078 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
H2AFJ-201ENST00000389078 GRIN2AQ12879 1464 aa35.66■■■■□ 3.3
H2AFJ-201ENST00000389078 NUP160Q12769 1436 aa35.59■■■■□ 3.29
H2AFJ-201ENST00000389078 ADAMTS12P58397 1594 aa35.54■■■■□ 3.28
H2AFJ-201ENST00000389078 ERCC6L2Q5T890 1561 aa35.54■■■■□ 3.28
H2AFJ-201ENST00000389078 FHAD1B1AJZ9 1412 aa35.51■■■■□ 3.28
H2AFJ-201ENST00000389078 CEP170Q5SW79 1584 aa35.5■■■■□ 3.27
H2AFJ-201ENST00000389078 TOP2BQ02880 1626 aa35.49■■■■□ 3.27
H2AFJ-201ENST00000389078 BIVM-ERCC5R4GMW8 1640 aa35.46■■■■□ 3.27
H2AFJ-201ENST00000389078 AEBP2Q6ZN18 517 aaPredicted RBP35.45■■■■□ 3.27
H2AFJ-201ENST00000389078 ERICH3Q5RHP9 1530 aa35.4■■■■□ 3.26
H2AFJ-201ENST00000389078 SHROOM2Q13796 1616 aa35.39■■■■□ 3.26
H2AFJ-201ENST00000389078 PRG4Q92954 1404 aaPredicted RBP35.25■■■■□ 3.23
H2AFJ-201ENST00000389078 JPH4Q96JJ6 628 aa35.25■■■■□ 3.23
H2AFJ-201ENST00000389078 RUSC2Q8N2Y8 1516 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms