RNA–Protein interactions for RNA: ENST00000384499.1

RNU1-13P-201, Transcript of RNA, U1 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU1-13P, Length 162 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-13P-201ENST00000384499 NISCHQ9Y2I1 1504 aa11.01□□□□□ -0.65
RNU1-13P-201ENST00000384499 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
RNU1-13P-201ENST00000384499 ABCC9O60706 1549 aa10.07□□□□□ -0.8
RNU1-13P-201ENST00000384499 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
RNU1-13P-201ENST00000384499 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
RNU1-13P-201ENST00000384499 DNAJC5BQ9UF47 199 aa9.55□□□□□ -0.88
RNU1-13P-201ENST00000384499 NACADO15069 1562 aa9.46□□□□□ -0.89
RNU1-13P-201ENST00000384499 BICRAQ9NZM4 1560 aa9.38□□□□□ -0.91
RNU1-13P-201ENST00000384499 MYO15BQ96JP2 1530 aa9.28□□□□□ -0.92
RNU1-13P-201ENST00000384499 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU1-13P-201ENST00000384499 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
RNU1-13P-201ENST00000384499 SHROOM4Q9ULL8 1493 aa9.15□□□□□ -0.94
RNU1-13P-201ENST00000384499 DCAF8L2P0C7V8 631 aa9.13□□□□□ -0.95
RNU1-13P-201ENST00000384499 ZCCHC6Q5VYS8 1495 aaKnown RBP9.13□□□□□ -0.95
RNU1-13P-201ENST00000384499 SCRIBQ14160 1630 aa9.12□□□□□ -0.95
RNU1-13P-201ENST00000384499 EIF4G1Q04637 1599 aaKnown RBP9.12□□□□□ -0.95
RNU1-13P-201ENST00000384499 DCAF1Q9Y4B6 1507 aa9.11□□□□□ -0.95
RNU1-13P-201ENST00000384499 CECR2Q9BXF3 1484 aa9.08□□□□□ -0.96
RNU1-13P-201ENST00000384499 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -0.99
RNU1-13P-201ENST00000384499 CUX2O14529 1486 aa8.77□□□□□ -1
RNU1-13P-201ENST00000384499 THOC2Q8NI27 1593 aaKnown RBP8.71□□□□□ -1.02
RNU1-13P-201ENST00000384499 SMARCA4P51532 1647 aa8.7□□□□□ -1.02
RNU1-13P-201ENST00000384499 KIF21AQ7Z4S6 1674 aa8.7□□□□□ -1.02
RNU1-13P-201ENST00000384499 HMGXB3Q12766 1538 aa8.7□□□□□ -1.02
RNU1-13P-201ENST00000384499 NCAPD3P42695 1498 aa8.68□□□□□ -1.02
RNU1-13P-201ENST00000384499 ERCC6Q03468 1493 aa8.67□□□□□ -1.02
RNU1-13P-201ENST00000384499 NESP48681 1621 aa8.65□□□□□ -1.03
RNU1-13P-201ENST00000384499 SMARCA2P51531 1590 aa8.65□□□□□ -1.03
RNU1-13P-201ENST00000384499 ATAD2BQ9ULI0 1458 aa8.64□□□□□ -1.03
RNU1-13P-201ENST00000384499 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
RNU1-13P-201ENST00000384499 LAMC3Q9Y6N6 1575 aa8.6□□□□□ -1.03
RNU1-13P-201ENST00000384499 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
RNU1-13P-201ENST00000384499 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
RNU1-13P-201ENST00000384499 PRDM2Q13029 1718 aa8.5□□□□□ -1.05
RNU1-13P-201ENST00000384499 MROH2BQ7Z745 1585 aa8.49□□□□□ -1.05
RNU1-13P-201ENST00000384499 WDR62O43379 1518 aa8.48□□□□□ -1.05
RNU1-13P-201ENST00000384499 WIZO95785 1651 aa8.46□□□□□ -1.05
RNU1-13P-201ENST00000384499 MRC2Q9UBG0 1479 aa8.43□□□□□ -1.06
RNU1-13P-201ENST00000384499 PDS5BQ9NTI5 1447 aa8.42□□□□□ -1.06
RNU1-13P-201ENST00000384499 CADPSQ9ULU8 1353 aa8.36□□□□□ -1.07
RNU1-13P-201ENST00000384499 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
RNU1-13P-201ENST00000384499 CEP164Q9UPV0 1460 aa8.36□□□□□ -1.07
RNU1-13P-201ENST00000384499 RIMBP3CA6NJZ7 1639 aa8.35□□□□□ -1.07
RNU1-13P-201ENST00000384499 RIMBP3BA6NNM3 1639 aa8.35□□□□□ -1.07
RNU1-13P-201ENST00000384499 RIMBP3Q9UFD9 1639 aa8.35□□□□□ -1.07
RNU1-13P-201ENST00000384499 FANCD2Q9BXW9 1451 aa8.32□□□□□ -1.08
RNU1-13P-201ENST00000384499 CHD1O14646 1710 aa8.32□□□□□ -1.08
RNU1-13P-201ENST00000384499 URB2Q14146 1524 aaKnown RBP8.31□□□□□ -1.08
RNU1-13P-201ENST00000384499 TOP2AP11388 1531 aaKnown RBP8.29□□□□□ -1.08
RNU1-13P-201ENST00000384499 CFTRP13569 1480 aa8.29□□□□□ -1.08
RNU1-13P-201ENST00000384499 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
RNU1-13P-201ENST00000384499 ARHGEF11O15085 1522 aa8.24□□□□□ -1.09
RNU1-13P-201ENST00000384499 ZNF608Q9ULD9 1512 aaPredicted RBP8.21□□□□□ -1.1
RNU1-13P-201ENST00000384499 TARBP1Q13395 1621 aaKnown RBP8.21□□□□□ -1.1
RNU1-13P-201ENST00000384499 OSCARQ8IYS5 282 aa8.19□□□□□ -1.1
RNU1-13P-201ENST00000384499 RSF1Q96T23 1441 aaPredicted RBP8.19□□□□□ -1.1
RNU1-13P-201ENST00000384499 IFT140Q96RY7 1462 aa8.18□□□□□ -1.1
RNU1-13P-201ENST00000384499 TOPBP1Q92547 1522 aa8.18□□□□□ -1.1
RNU1-13P-201ENST00000384499 DNMBPQ6XZF7 1577 aa8.18□□□□□ -1.1
RNU1-13P-201ENST00000384499 WDR97A6NE52 1622 aa8.14□□□□□ -1.11
RNU1-13P-201ENST00000384499 ARAP1Q96P48 1450 aa8.14□□□□□ -1.11
RNU1-13P-201ENST00000384499 CCDC88BA6NC98 1476 aa8.13□□□□□ -1.11
RNU1-13P-201ENST00000384499 PBRM1Q86U86 1689 aa8.13□□□□□ -1.11
RNU1-13P-201ENST00000384499 CLASP1Q7Z460 1538 aa8.11□□□□□ -1.11
RNU1-13P-201ENST00000384499 ABCC8Q09428 1581 aa8.1□□□□□ -1.11
RNU1-13P-201ENST00000384499 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
RNU1-13P-201ENST00000384499 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.12
RNU1-13P-201ENST00000384499 KIF13AQ9H1H9 1805 aa8.04□□□□□ -1.12
RNU1-13P-201ENST00000384499 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
RNU1-13P-201ENST00000384499 RAD54L2Q9Y4B4 1467 aa8.03□□□□□ -1.12
RNU1-13P-201ENST00000384499 SNAPC4Q5SXM2 1469 aa8.02□□□□□ -1.13
RNU1-13P-201ENST00000384499 ABCA5Q8WWZ7 1642 aa8.01□□□□□ -1.13
RNU1-13P-201ENST00000384499 CYB5RLQ6IPT4 315 aa8.01□□□□□ -1.13
RNU1-13P-201ENST00000384499 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
RNU1-13P-201ENST00000384499 CUX1P39880 1505 aa8□□□□□ -1.13
RNU1-13P-201ENST00000384499 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
RNU1-13P-201ENST00000384499 ERCC6L2Q5T890 1561 aa7.97□□□□□ -1.13
RNU1-13P-201ENST00000384499 SHROOM2Q13796 1616 aa7.96□□□□□ -1.13
RNU1-13P-201ENST00000384499 SOGA1O94964 1423 aa7.95□□□□□ -1.14
RNU1-13P-201ENST00000384499 SYNJ2O15056 1496 aa7.95□□□□□ -1.14
RNU1-13P-201ENST00000384499 TRHP20396 242 aaPredicted RBP7.95□□□□□ -1.14
RNU1-13P-201ENST00000384499 TDRD9Q8NDG6 1382 aaKnown RBP7.95□□□□□ -1.14
RNU1-13P-201ENST00000384499 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
RNU1-13P-201ENST00000384499 ADAMTS12P58397 1594 aa7.94□□□□□ -1.14
RNU1-13P-201ENST00000384499 CEP170Q5SW79 1584 aa7.93□□□□□ -1.14
RNU1-13P-201ENST00000384499 GAPVD1Q14C86 1478 aa7.93□□□□□ -1.14
RNU1-13P-201ENST00000384499 BIVM-ERCC5R4GMW8 1640 aa7.92□□□□□ -1.14
RNU1-13P-201ENST00000384499 FBLN2P98095 1184 aa7.92□□□□□ -1.14
RNU1-13P-201ENST00000384499 ABCA10Q8WWZ4 1543 aa7.9□□□□□ -1.14
RNU1-13P-201ENST00000384499 GRIN2AQ12879 1464 aa7.88□□□□□ -1.15
RNU1-13P-201ENST00000384499 TSPOAP1O95153 1857 aa7.87□□□□□ -1.15
RNU1-13P-201ENST00000384499 TOP2BQ02880 1626 aa7.86□□□□□ -1.15
RNU1-13P-201ENST00000384499 NUP160Q12769 1436 aa7.86□□□□□ -1.15
RNU1-13P-201ENST00000384499 RUSC2Q8N2Y8 1516 aa7.85□□□□□ -1.15
RNU1-13P-201ENST00000384499 CHMP7Q8WUX9 453 aaPredicted RBP7.85□□□□□ -1.15
RNU1-13P-201ENST00000384499 DIP2BQ9P265 1576 aa7.84□□□□□ -1.15
RNU1-13P-201ENST00000384499 AEBP2Q6ZN18 517 aaPredicted RBP7.83□□□□□ -1.16
RNU1-13P-201ENST00000384499 ADCY10Q96PN6 1610 aa7.82□□□□□ -1.16
RNU1-13P-201ENST00000384499 ERICH3Q5RHP9 1530 aa7.82□□□□□ -1.16
RNU1-13P-201ENST00000384499 PPRC1Q5VV67 1664 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms