RNA–Protein interactions for RNA: ENST00000383096.7

CCDC178-202, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 3,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-202ENST00000383096 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
CCDC178-202ENST00000383096 ABCC9O60706 1549 aa15.59■□□□□ 0.09
CCDC178-202ENST00000383096 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
CCDC178-202ENST00000383096 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
CCDC178-202ENST00000383096 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
CCDC178-202ENST00000383096 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
CCDC178-202ENST00000383096 NACADO15069 1562 aa14.67□□□□□ -0.06
CCDC178-202ENST00000383096 BICRAQ9NZM4 1560 aa14.59□□□□□ -0.07
CCDC178-202ENST00000383096 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
CCDC178-202ENST00000383096 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
CCDC178-202ENST00000383096 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
CCDC178-202ENST00000383096 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC178-202ENST00000383096 DNAJC5Q9H3Z4 198 aa14.26□□□□□ -0.13
CCDC178-202ENST00000383096 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
CCDC178-202ENST00000383096 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
CCDC178-202ENST00000383096 DCAF1Q9Y4B6 1507 aa14.07□□□□□ -0.16
CCDC178-202ENST00000383096 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
CCDC178-202ENST00000383096 CUX2O14529 1486 aa13.88□□□□□ -0.19
CCDC178-202ENST00000383096 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
CCDC178-202ENST00000383096 DCAF8L2P0C7V8 631 aa13.69□□□□□ -0.22
CCDC178-202ENST00000383096 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
CCDC178-202ENST00000383096 NCAPD3P42695 1498 aa13.53□□□□□ -0.24
CCDC178-202ENST00000383096 HMGXB3Q12766 1538 aa13.46□□□□□ -0.26
CCDC178-202ENST00000383096 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
CCDC178-202ENST00000383096 ATAD2BQ9ULI0 1458 aa13.36□□□□□ -0.27
CCDC178-202ENST00000383096 NESP48681 1621 aa13.34□□□□□ -0.27
CCDC178-202ENST00000383096 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
CCDC178-202ENST00000383096 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
CCDC178-202ENST00000383096 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
CCDC178-202ENST00000383096 SMARCA2P51531 1590 aa13.3□□□□□ -0.28
CCDC178-202ENST00000383096 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
CCDC178-202ENST00000383096 WDR62O43379 1518 aa13.21□□□□□ -0.29
CCDC178-202ENST00000383096 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
CCDC178-202ENST00000383096 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
CCDC178-202ENST00000383096 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
CCDC178-202ENST00000383096 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
CCDC178-202ENST00000383096 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
CCDC178-202ENST00000383096 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
CCDC178-202ENST00000383096 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
CCDC178-202ENST00000383096 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
CCDC178-202ENST00000383096 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
CCDC178-202ENST00000383096 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
CCDC178-202ENST00000383096 ARHGEF11O15085 1522 aa12.87□□□□□ -0.35
CCDC178-202ENST00000383096 PRDM2Q13029 1718 aa12.87□□□□□ -0.35
CCDC178-202ENST00000383096 CEP164Q9UPV0 1460 aa12.86□□□□□ -0.35
CCDC178-202ENST00000383096 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
CCDC178-202ENST00000383096 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
CCDC178-202ENST00000383096 CFTRP13569 1480 aa12.81□□□□□ -0.36
CCDC178-202ENST00000383096 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
CCDC178-202ENST00000383096 WIZO95785 1651 aa12.76□□□□□ -0.37
CCDC178-202ENST00000383096 ARAP1Q96P48 1450 aa12.73□□□□□ -0.37
CCDC178-202ENST00000383096 CHD1O14646 1710 aa12.71□□□□□ -0.37
CCDC178-202ENST00000383096 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
CCDC178-202ENST00000383096 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
CCDC178-202ENST00000383096 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
CCDC178-202ENST00000383096 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
CCDC178-202ENST00000383096 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
CCDC178-202ENST00000383096 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
CCDC178-202ENST00000383096 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
CCDC178-202ENST00000383096 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
CCDC178-202ENST00000383096 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
CCDC178-202ENST00000383096 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
CCDC178-202ENST00000383096 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
CCDC178-202ENST00000383096 CYB5RLQ6IPT4 315 aa12.45□□□□□ -0.42
CCDC178-202ENST00000383096 KIF13AQ9H1H9 1805 aa12.41□□□□□ -0.42
CCDC178-202ENST00000383096 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC178-202ENST00000383096 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
CCDC178-202ENST00000383096 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
CCDC178-202ENST00000383096 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
CCDC178-202ENST00000383096 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
CCDC178-202ENST00000383096 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
CCDC178-202ENST00000383096 SHROOM2Q13796 1616 aa12.33□□□□□ -0.44
CCDC178-202ENST00000383096 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
CCDC178-202ENST00000383096 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
CCDC178-202ENST00000383096 AEBP2Q6ZN18 517 aaPredicted RBP12.32□□□□□ -0.44
CCDC178-202ENST00000383096 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
CCDC178-202ENST00000383096 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
CCDC178-202ENST00000383096 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
CCDC178-202ENST00000383096 ERCC6L2Q5T890 1561 aa12.26□□□□□ -0.45
CCDC178-202ENST00000383096 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
CCDC178-202ENST00000383096 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
CCDC178-202ENST00000383096 CUX1P39880 1505 aa12.2□□□□□ -0.46
CCDC178-202ENST00000383096 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
CCDC178-202ENST00000383096 CEP170Q5SW79 1584 aa12.2□□□□□ -0.46
CCDC178-202ENST00000383096 SOGA1O94964 1423 aa12.19□□□□□ -0.46
CCDC178-202ENST00000383096 NUP160Q12769 1436 aa12.18□□□□□ -0.46
CCDC178-202ENST00000383096 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
CCDC178-202ENST00000383096 MAPKBP1O60336 1514 aa12.15□□□□□ -0.46
CCDC178-202ENST00000383096 ADAMTS12P58397 1594 aa12.15□□□□□ -0.46
CCDC178-202ENST00000383096 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
CCDC178-202ENST00000383096 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
CCDC178-202ENST00000383096 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
CCDC178-202ENST00000383096 ABCC10Q5T3U5 1492 aa12.11□□□□□ -0.47
CCDC178-202ENST00000383096 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
CCDC178-202ENST00000383096 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
CCDC178-202ENST00000383096 PPRC1Q5VV67 1664 aaKnown RBP12.07□□□□□ -0.48
CCDC178-202ENST00000383096 ADCY10Q96PN6 1610 aa12.06□□□□□ -0.48
CCDC178-202ENST00000383096 FBLN2P98095 1184 aa12.05□□□□□ -0.48
CCDC178-202ENST00000383096 KDM6BO15054 1643 aa12.04□□□□□ -0.48
CCDC178-202ENST00000383096 CHMP7Q8WUX9 453 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms