RNA–Protein interactions for RNA: ENST00000382447.8

CBWD1-207, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-207ENST00000382447 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
CBWD1-207ENST00000382447 ABCC9O60706 1549 aa20.61■□□□□ 0.89
CBWD1-207ENST00000382447 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
CBWD1-207ENST00000382447 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
CBWD1-207ENST00000382447 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
CBWD1-207ENST00000382447 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
CBWD1-207ENST00000382447 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
CBWD1-207ENST00000382447 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
CBWD1-207ENST00000382447 NACADO15069 1562 aa18.74■□□□□ 0.59
CBWD1-207ENST00000382447 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
CBWD1-207ENST00000382447 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
CBWD1-207ENST00000382447 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
CBWD1-207ENST00000382447 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
CBWD1-207ENST00000382447 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.55
CBWD1-207ENST00000382447 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
CBWD1-207ENST00000382447 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
CBWD1-207ENST00000382447 CUX2O14529 1486 aa18.18■□□□□ 0.5
CBWD1-207ENST00000382447 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
CBWD1-207ENST00000382447 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
CBWD1-207ENST00000382447 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
CBWD1-207ENST00000382447 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
CBWD1-207ENST00000382447 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
CBWD1-207ENST00000382447 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
CBWD1-207ENST00000382447 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
CBWD1-207ENST00000382447 NESP48681 1621 aa17.39■□□□□ 0.37
CBWD1-207ENST00000382447 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
CBWD1-207ENST00000382447 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
CBWD1-207ENST00000382447 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
CBWD1-207ENST00000382447 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
CBWD1-207ENST00000382447 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
CBWD1-207ENST00000382447 BAZ1AQ9NRL2 1556 aaPredicted RBP17.13■□□□□ 0.33
CBWD1-207ENST00000382447 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
CBWD1-207ENST00000382447 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
CBWD1-207ENST00000382447 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
CBWD1-207ENST00000382447 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
CBWD1-207ENST00000382447 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
CBWD1-207ENST00000382447 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
CBWD1-207ENST00000382447 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
CBWD1-207ENST00000382447 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
CBWD1-207ENST00000382447 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
CBWD1-207ENST00000382447 WDR62O43379 1518 aa16.93■□□□□ 0.3
CBWD1-207ENST00000382447 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
CBWD1-207ENST00000382447 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
CBWD1-207ENST00000382447 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
CBWD1-207ENST00000382447 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
CBWD1-207ENST00000382447 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
CBWD1-207ENST00000382447 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
CBWD1-207ENST00000382447 CEP164Q9UPV0 1460 aa16.69■□□□□ 0.26
CBWD1-207ENST00000382447 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
CBWD1-207ENST00000382447 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
CBWD1-207ENST00000382447 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
CBWD1-207ENST00000382447 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
CBWD1-207ENST00000382447 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
CBWD1-207ENST00000382447 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
CBWD1-207ENST00000382447 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
CBWD1-207ENST00000382447 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
CBWD1-207ENST00000382447 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
CBWD1-207ENST00000382447 FBLN2P98095 1184 aa16.37■□□□□ 0.21
CBWD1-207ENST00000382447 CFTRP13569 1480 aa16.35■□□□□ 0.21
CBWD1-207ENST00000382447 CHD1O14646 1710 aa16.31■□□□□ 0.2
CBWD1-207ENST00000382447 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
CBWD1-207ENST00000382447 KDM4FA0A1W2PPD8 638 aa16.21■□□□□ 0.19
CBWD1-207ENST00000382447 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
CBWD1-207ENST00000382447 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
CBWD1-207ENST00000382447 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
CBWD1-207ENST00000382447 TOPBP1Q92547 1522 aa16.13■□□□□ 0.17
CBWD1-207ENST00000382447 WIZO95785 1651 aa16.12■□□□□ 0.17
CBWD1-207ENST00000382447 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
CBWD1-207ENST00000382447 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
CBWD1-207ENST00000382447 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
CBWD1-207ENST00000382447 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
CBWD1-207ENST00000382447 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
CBWD1-207ENST00000382447 FBXO41Q8TF61 875 aa16.01■□□□□ 0.15
CBWD1-207ENST00000382447 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
CBWD1-207ENST00000382447 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
CBWD1-207ENST00000382447 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
CBWD1-207ENST00000382447 PRDM2Q13029 1718 aa15.96■□□□□ 0.15
CBWD1-207ENST00000382447 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.14
CBWD1-207ENST00000382447 KIF13AQ9H1H9 1805 aa15.92■□□□□ 0.14
CBWD1-207ENST00000382447 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
CBWD1-207ENST00000382447 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
CBWD1-207ENST00000382447 FAM69CQ0P6D2 419 aa15.89■□□□□ 0.13
CBWD1-207ENST00000382447 SYNJ2O15056 1496 aa15.89■□□□□ 0.13
CBWD1-207ENST00000382447 LMTK3Q96Q04 1460 aa15.89■□□□□ 0.13
CBWD1-207ENST00000382447 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
CBWD1-207ENST00000382447 RAD54L2Q9Y4B4 1467 aa15.88■□□□□ 0.13
CBWD1-207ENST00000382447 HECW2Q9P2P5 1572 aa15.87■□□□□ 0.13
CBWD1-207ENST00000382447 SOGA1O94964 1423 aa15.85■□□□□ 0.13
CBWD1-207ENST00000382447 KDM6BO15054 1643 aa15.83■□□□□ 0.13
CBWD1-207ENST00000382447 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
CBWD1-207ENST00000382447 SOCS7O14512 581 aa15.81■□□□□ 0.12
CBWD1-207ENST00000382447 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
CBWD1-207ENST00000382447 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
CBWD1-207ENST00000382447 ADGRL1O94910 1474 aa15.78■□□□□ 0.12
CBWD1-207ENST00000382447 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
CBWD1-207ENST00000382447 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
CBWD1-207ENST00000382447 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
CBWD1-207ENST00000382447 ILDR2Q71H61 639 aa15.69■□□□□ 0.1
CBWD1-207ENST00000382447 DIP2BQ9P265 1576 aa15.68■□□□□ 0.1
CBWD1-207ENST00000382447 FGD5Q6ZNL6 1462 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms