RNA–Protein interactions for RNA: ENST00000381732.3

RCL1-203, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 2 BASIC

Gene RCL1, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-203ENST00000381732 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
RCL1-203ENST00000381732 ABCC9O60706 1549 aa26.15■■□□□ 1.78
RCL1-203ENST00000381732 CCDC180Q9P1Z9 1646 aa26.09■■□□□ 1.77
RCL1-203ENST00000381732 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
RCL1-203ENST00000381732 NACADO15069 1562 aa24.64■■□□□ 1.54
RCL1-203ENST00000381732 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
RCL1-203ENST00000381732 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
RCL1-203ENST00000381732 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
RCL1-203ENST00000381732 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
RCL1-203ENST00000381732 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
RCL1-203ENST00000381732 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
RCL1-203ENST00000381732 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
RCL1-203ENST00000381732 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.42
RCL1-203ENST00000381732 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
RCL1-203ENST00000381732 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
RCL1-203ENST00000381732 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
RCL1-203ENST00000381732 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
RCL1-203ENST00000381732 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
RCL1-203ENST00000381732 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
RCL1-203ENST00000381732 DNAJC5Q9H3Z4 198 aa22.7■■□□□ 1.22
RCL1-203ENST00000381732 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
RCL1-203ENST00000381732 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
RCL1-203ENST00000381732 CUX2O14529 1486 aa22.61■■□□□ 1.21
RCL1-203ENST00000381732 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
RCL1-203ENST00000381732 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
RCL1-203ENST00000381732 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
RCL1-203ENST00000381732 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
RCL1-203ENST00000381732 NESP48681 1621 aa22.44■■□□□ 1.18
RCL1-203ENST00000381732 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
RCL1-203ENST00000381732 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
RCL1-203ENST00000381732 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
RCL1-203ENST00000381732 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
RCL1-203ENST00000381732 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
RCL1-203ENST00000381732 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.15
RCL1-203ENST00000381732 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.13
RCL1-203ENST00000381732 WIZO95785 1651 aa22.04■■□□□ 1.12
RCL1-203ENST00000381732 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
RCL1-203ENST00000381732 MRC2Q9UBG0 1479 aa21.95■■□□□ 1.1
RCL1-203ENST00000381732 WDR62O43379 1518 aa21.94■■□□□ 1.1
RCL1-203ENST00000381732 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
RCL1-203ENST00000381732 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
RCL1-203ENST00000381732 CFTRP13569 1480 aa21.76■■□□□ 1.07
RCL1-203ENST00000381732 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
RCL1-203ENST00000381732 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
RCL1-203ENST00000381732 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
RCL1-203ENST00000381732 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
RCL1-203ENST00000381732 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
RCL1-203ENST00000381732 CCDC88BA6NC98 1476 aa21.46■■□□□ 1.03
RCL1-203ENST00000381732 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
RCL1-203ENST00000381732 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
RCL1-203ENST00000381732 IFT140Q96RY7 1462 aa21.39■■□□□ 1.01
RCL1-203ENST00000381732 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
RCL1-203ENST00000381732 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1
RCL1-203ENST00000381732 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1
RCL1-203ENST00000381732 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1
RCL1-203ENST00000381732 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
RCL1-203ENST00000381732 DNMBPQ6XZF7 1577 aa21.3■■□□□ 1
RCL1-203ENST00000381732 ABCC8Q09428 1581 aa21.27■■□□□ 1
RCL1-203ENST00000381732 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
RCL1-203ENST00000381732 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
RCL1-203ENST00000381732 CHD1O14646 1710 aa21.2■□□□□ 0.98
RCL1-203ENST00000381732 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.976e-8■■■■□ 22
RCL1-203ENST00000381732 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
RCL1-203ENST00000381732 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
RCL1-203ENST00000381732 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
RCL1-203ENST00000381732 WDR97A6NE52 1622 aa21■□□□□ 0.95
RCL1-203ENST00000381732 SOGA1O94964 1423 aa20.99■□□□□ 0.95
RCL1-203ENST00000381732 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
RCL1-203ENST00000381732 CYB5RLQ6IPT4 315 aa20.97■□□□□ 0.95
RCL1-203ENST00000381732 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
RCL1-203ENST00000381732 CUX1P39880 1505 aa20.96■□□□□ 0.95
RCL1-203ENST00000381732 SNAPC4Q5SXM2 1469 aa20.95■□□□□ 0.94
RCL1-203ENST00000381732 FBLN2P98095 1184 aa20.95■□□□□ 0.94
RCL1-203ENST00000381732 CLASP1Q7Z460 1538 aa20.93■□□□□ 0.94
RCL1-203ENST00000381732 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
RCL1-203ENST00000381732 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
RCL1-203ENST00000381732 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
RCL1-203ENST00000381732 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
RCL1-203ENST00000381732 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
RCL1-203ENST00000381732 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
RCL1-203ENST00000381732 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
RCL1-203ENST00000381732 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
RCL1-203ENST00000381732 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
RCL1-203ENST00000381732 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
RCL1-203ENST00000381732 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
RCL1-203ENST00000381732 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
RCL1-203ENST00000381732 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
RCL1-203ENST00000381732 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
RCL1-203ENST00000381732 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
RCL1-203ENST00000381732 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
RCL1-203ENST00000381732 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
RCL1-203ENST00000381732 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
RCL1-203ENST00000381732 NUP160Q12769 1436 aa20.54■□□□□ 0.88
RCL1-203ENST00000381732 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
RCL1-203ENST00000381732 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
RCL1-203ENST00000381732 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
RCL1-203ENST00000381732 RUSC2Q8N2Y8 1516 aa20.35■□□□□ 0.85
RCL1-203ENST00000381732 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
RCL1-203ENST00000381732 PRG4Q92954 1404 aaPredicted RBP20.32■□□□□ 0.84
RCL1-203ENST00000381732 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms