RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 NISCHQ9Y2I1 1504 aa24.69■■□□□ 1.54
FAM239A-201ENST00000381108 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
FAM239A-201ENST00000381108 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
FAM239A-201ENST00000381108 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
FAM239A-201ENST00000381108 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
FAM239A-201ENST00000381108 ABCC9O60706 1549 aa20.44■□□□□ 0.86
FAM239A-201ENST00000381108 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
FAM239A-201ENST00000381108 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
FAM239A-201ENST00000381108 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
FAM239A-201ENST00000381108 NACADO15069 1562 aa20■□□□□ 0.79
FAM239A-201ENST00000381108 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
FAM239A-201ENST00000381108 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
FAM239A-201ENST00000381108 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.75
FAM239A-201ENST00000381108 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
FAM239A-201ENST00000381108 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
FAM239A-201ENST00000381108 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
FAM239A-201ENST00000381108 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
FAM239A-201ENST00000381108 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
FAM239A-201ENST00000381108 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
FAM239A-201ENST00000381108 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
FAM239A-201ENST00000381108 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
FAM239A-201ENST00000381108 SMARCA4P51532 1647 aa19■□□□□ 0.63
FAM239A-201ENST00000381108 WIZO95785 1651 aa19■□□□□ 0.63
FAM239A-201ENST00000381108 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
FAM239A-201ENST00000381108 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
FAM239A-201ENST00000381108 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
FAM239A-201ENST00000381108 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
FAM239A-201ENST00000381108 SMARCA2P51531 1590 aa18.64■□□□□ 0.57
FAM239A-201ENST00000381108 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
FAM239A-201ENST00000381108 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
FAM239A-201ENST00000381108 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
FAM239A-201ENST00000381108 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
FAM239A-201ENST00000381108 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
FAM239A-201ENST00000381108 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
FAM239A-201ENST00000381108 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
FAM239A-201ENST00000381108 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
FAM239A-201ENST00000381108 CFTRP13569 1480 aa18.08■□□□□ 0.48
FAM239A-201ENST00000381108 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
FAM239A-201ENST00000381108 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
FAM239A-201ENST00000381108 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
FAM239A-201ENST00000381108 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.48
FAM239A-201ENST00000381108 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
FAM239A-201ENST00000381108 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
FAM239A-201ENST00000381108 LOC105371045A0A1W2PR82 267 aa17.98■□□□□ 0.47
FAM239A-201ENST00000381108 NESP48681 1621 aa17.95■□□□□ 0.46
FAM239A-201ENST00000381108 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
FAM239A-201ENST00000381108 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
FAM239A-201ENST00000381108 SOGA1O94964 1423 aa17.88■□□□□ 0.45
FAM239A-201ENST00000381108 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
FAM239A-201ENST00000381108 CUX1P39880 1505 aa17.87■□□□□ 0.45
FAM239A-201ENST00000381108 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
FAM239A-201ENST00000381108 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
FAM239A-201ENST00000381108 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.44
FAM239A-201ENST00000381108 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
FAM239A-201ENST00000381108 EEA1Q15075 1411 aa17.74■□□□□ 0.43
FAM239A-201ENST00000381108 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
FAM239A-201ENST00000381108 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
FAM239A-201ENST00000381108 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
FAM239A-201ENST00000381108 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
FAM239A-201ENST00000381108 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
FAM239A-201ENST00000381108 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
FAM239A-201ENST00000381108 URB2Q14146 1524 aaKnown RBP17.64■□□□□ 0.41
FAM239A-201ENST00000381108 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
FAM239A-201ENST00000381108 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
FAM239A-201ENST00000381108 CUX2O14529 1486 aa17.58■□□□□ 0.4
FAM239A-201ENST00000381108 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
FAM239A-201ENST00000381108 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
FAM239A-201ENST00000381108 KIF21BO75037 1637 aa17.55■□□□□ 0.4
FAM239A-201ENST00000381108 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
FAM239A-201ENST00000381108 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
FAM239A-201ENST00000381108 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
FAM239A-201ENST00000381108 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
FAM239A-201ENST00000381108 ABCA10Q8WWZ4 1543 aa17.48■□□□□ 0.39
FAM239A-201ENST00000381108 TNIKQ9UKE5 1360 aa17.47■□□□□ 0.39
FAM239A-201ENST00000381108 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
FAM239A-201ENST00000381108 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
FAM239A-201ENST00000381108 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
FAM239A-201ENST00000381108 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
FAM239A-201ENST00000381108 IGF1RP08069 1367 aa17.42■□□□□ 0.38
FAM239A-201ENST00000381108 WDR62O43379 1518 aa17.41■□□□□ 0.38
FAM239A-201ENST00000381108 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
FAM239A-201ENST00000381108 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
FAM239A-201ENST00000381108 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
FAM239A-201ENST00000381108 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
FAM239A-201ENST00000381108 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
FAM239A-201ENST00000381108 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
FAM239A-201ENST00000381108 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.36
FAM239A-201ENST00000381108 CLIP1P30622 1438 aa17.3■□□□□ 0.36
FAM239A-201ENST00000381108 CUL7Q14999 1698 aa17.29■□□□□ 0.36
FAM239A-201ENST00000381108 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
FAM239A-201ENST00000381108 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.36
FAM239A-201ENST00000381108 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
FAM239A-201ENST00000381108 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
FAM239A-201ENST00000381108 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
FAM239A-201ENST00000381108 EIF4G3O43432 1585 aaKnown RBP17.2■□□□□ 0.34
FAM239A-201ENST00000381108 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
FAM239A-201ENST00000381108 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
FAM239A-201ENST00000381108 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
FAM239A-201ENST00000381108 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
FAM239A-201ENST00000381108 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms