RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 NISCHQ9Y2I1 1504 aa50.79■■■■■ 5.72
CDKN2A-202ENST00000380150 ABCC9O60706 1549 aa45.7■■■■■ 4.91
CDKN2A-202ENST00000380150 CCDC180Q9P1Z9 1646 aa45.51■■■■■ 4.88
CDKN2A-202ENST00000380150 RB1CC1Q8TDY2 1594 aa43.35■■■■■ 4.53
CDKN2A-202ENST00000380150 NACADO15069 1562 aa43.03■■■■■ 4.48
CDKN2A-202ENST00000380150 DNAJC5BQ9UF47 199 aa43■■■■■ 4.47
CDKN2A-202ENST00000380150 DCAF8L2P0C7V8 631 aa42.95■■■■■ 4.47
CDKN2A-202ENST00000380150 PABPN1Q86U42 306 aaKnown RBP eCLIP42.59■■■■■ 4.41
CDKN2A-202ENST00000380150 UNC13AQ9UPW8 1703 aa42.46■■■■■ 4.39
CDKN2A-202ENST00000380150 MYO15BQ96JP2 1530 aa42.39■■■■■ 4.38
CDKN2A-202ENST00000380150 BICRAQ9NZM4 1560 aa42.22■■■■■ 4.35
CDKN2A-202ENST00000380150 ZCCHC6Q5VYS8 1495 aaKnown RBP42.09■■■■■ 4.33
CDKN2A-202ENST00000380150 DCAF1Q9Y4B6 1507 aa41.86■■■■■ 4.29
CDKN2A-202ENST00000380150 SCRIBQ14160 1630 aa41.6■■■■■ 4.25
CDKN2A-202ENST00000380150 SHROOM4Q9ULL8 1493 aa41.43■■■■■ 4.22
CDKN2A-202ENST00000380150 CC2D2AQ9P2K1 1620 aa41.24■■■■■ 4.19
CDKN2A-202ENST00000380150 EIF4G1Q04637 1599 aaKnown RBP41.13■■■■■ 4.18
CDKN2A-202ENST00000380150 CECR2Q9BXF3 1484 aa41.12■■■■■ 4.17
CDKN2A-202ENST00000380150 NCAPD3P42695 1498 aa39.77■■■■□ 3.96
CDKN2A-202ENST00000380150 ATAD2BQ9ULI0 1458 aa39.68■■■■□ 3.94
CDKN2A-202ENST00000380150 SMARCA4P51532 1647 aa39.63■■■■□ 3.93
CDKN2A-202ENST00000380150 SMARCA2P51531 1590 aa39.5■■■■□ 3.91
CDKN2A-202ENST00000380150 HMGXB3Q12766 1538 aa39.45■■■■□ 3.91
CDKN2A-202ENST00000380150 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.89
CDKN2A-202ENST00000380150 ERCC6Q03468 1493 aa39.37■■■■□ 3.89
CDKN2A-202ENST00000380150 DNAJC5Q9H3Z4 198 aa39.37■■■■□ 3.89
CDKN2A-202ENST00000380150 NESP48681 1621 aa39.29■■■■□ 3.88
CDKN2A-202ENST00000380150 CUX2O14529 1486 aa39.27■■■■□ 3.88
CDKN2A-202ENST00000380150 BAZ1BQ9UIG0 1483 aaKnown RBP39.27■■■■□ 3.88
CDKN2A-202ENST00000380150 MROH2BQ7Z745 1585 aa39.21■■■■□ 3.87
CDKN2A-202ENST00000380150 PEG3Q9GZU2 1588 aa39.2■■■■□ 3.87
CDKN2A-202ENST00000380150 LAMC3Q9Y6N6 1575 aa38.85■■■■□ 3.81
CDKN2A-202ENST00000380150 THOC2Q8NI27 1593 aaKnown RBP38.82■■■■□ 3.81
CDKN2A-202ENST00000380150 WIZO95785 1651 aa38.73■■■■□ 3.79
CDKN2A-202ENST00000380150 KIF21AQ7Z4S6 1674 aa38.71■■■■□ 3.79
CDKN2A-202ENST00000380150 PDS5BQ9NTI5 1447 aa38.63■■■■□ 3.77
CDKN2A-202ENST00000380150 CADPSQ9ULU8 1353 aa38.57■■■■□ 3.77
CDKN2A-202ENST00000380150 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
CDKN2A-202ENST00000380150 MRC2Q9UBG0 1479 aa38.34■■■■□ 3.73
CDKN2A-202ENST00000380150 WDR62O43379 1518 aa38.25■■■■□ 3.71
CDKN2A-202ENST00000380150 CEP164Q9UPV0 1460 aa38.17■■■■□ 3.7
CDKN2A-202ENST00000380150 TOP2AP11388 1531 aaKnown RBP38.17■■■■□ 3.7
CDKN2A-202ENST00000380150 FANCD2Q9BXW9 1451 aa38.15■■■■□ 3.7
CDKN2A-202ENST00000380150 CFTRP13569 1480 aa38.13■■■■□ 3.69
CDKN2A-202ENST00000380150 URB2Q14146 1524 aaKnown RBP37.89■■■■□ 3.66
CDKN2A-202ENST00000380150 CCDC88BA6NC98 1476 aa37.78■■■■□ 3.64
CDKN2A-202ENST00000380150 TRIM41Q8WV44 630 aa37.69■■■■□ 3.62
CDKN2A-202ENST00000380150 PRDM2Q13029 1718 aa37.69■■■■□ 3.62
CDKN2A-202ENST00000380150 OSCARQ8IYS5 282 aa37.51■■■■□ 3.6
CDKN2A-202ENST00000380150 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
CDKN2A-202ENST00000380150 TOPBP1Q92547 1522 aa37.44■■■■□ 3.58
CDKN2A-202ENST00000380150 IFT140Q96RY7 1462 aa37.39■■■■□ 3.58
CDKN2A-202ENST00000380150 DNMBPQ6XZF7 1577 aa37.26■■■■□ 3.56
CDKN2A-202ENST00000380150 ABCC8Q09428 1581 aa37.23■■■■□ 3.55
CDKN2A-202ENST00000380150 EIF4G3O43432 1585 aaKnown RBP37.19■■■■□ 3.54
CDKN2A-202ENST00000380150 TARBP1Q13395 1621 aaKnown RBP37.12■■■■□ 3.53
CDKN2A-202ENST00000380150 AQRO60306 1485 aaKnown RBP eCLIP37.1■■■■□ 3.53
CDKN2A-202ENST00000380150 RIMBP3CA6NJZ7 1639 aa37.08■■■■□ 3.53
CDKN2A-202ENST00000380150 RIMBP3BA6NNM3 1639 aa37.08■■■■□ 3.53
CDKN2A-202ENST00000380150 RIMBP3Q9UFD9 1639 aa37.08■■■■□ 3.53
CDKN2A-202ENST00000380150 POLA1P09884 1462 aaPredicted RBP37.07■■■■□ 3.52
CDKN2A-202ENST00000380150 RAD54L2Q9Y4B4 1467 aa36.99■■■■□ 3.51
CDKN2A-202ENST00000380150 ARHGEF11O15085 1522 aa36.95■■■■□ 3.5
CDKN2A-202ENST00000380150 CHD1O14646 1710 aa36.93■■■■□ 3.5
CDKN2A-202ENST00000380150 SOGA1O94964 1423 aa36.88■■■■□ 3.49
CDKN2A-202ENST00000380150 TDRD9Q8NDG6 1382 aaKnown RBP36.86■■■■□ 3.49
CDKN2A-202ENST00000380150 FBLN2P98095 1184 aa36.84■■■■□ 3.49
CDKN2A-202ENST00000380150 FGD5Q6ZNL6 1462 aa36.83■■■■□ 3.49
CDKN2A-202ENST00000380150 CUX1P39880 1505 aa36.82■■■■□ 3.48
CDKN2A-202ENST00000380150 CYB5RLQ6IPT4 315 aa36.7■■■■□ 3.47
CDKN2A-202ENST00000380150 SNAPC4Q5SXM2 1469 aa36.69■■■■□ 3.46
CDKN2A-202ENST00000380150 SUPT5HO00267 1087 aaKnown RBP36.67■■■■□ 3.46
CDKN2A-202ENST00000380150 ARAP1Q96P48 1450 aa36.62■■■■□ 3.45
CDKN2A-202ENST00000380150 WDR97A6NE52 1622 aa36.59■■■■□ 3.45
CDKN2A-202ENST00000380150 GRIN2BQ13224 1484 aa36.53■■■■□ 3.44
CDKN2A-202ENST00000380150 MAGI1Q96QZ7 1491 aaPredicted RBP36.51■■■■□ 3.44
CDKN2A-202ENST00000380150 CHMP7Q8WUX9 453 aaPredicted RBP36.51■■■■□ 3.44
CDKN2A-202ENST00000380150 CLASP1Q7Z460 1538 aa36.49■■■■□ 3.43
CDKN2A-202ENST00000380150 SYNJ2O15056 1496 aa36.42■■■■□ 3.42
CDKN2A-202ENST00000380150 GAPVD1Q14C86 1478 aa36.42■■■■□ 3.42
CDKN2A-202ENST00000380150 PBRM1Q86U86 1689 aa36.41■■■■□ 3.42
CDKN2A-202ENST00000380150 SYNJ1O43426 1573 aa36.4■■■■□ 3.42
CDKN2A-202ENST00000380150 ABCA10Q8WWZ4 1543 aa36.37■■■■□ 3.41
CDKN2A-202ENST00000380150 ABCA5Q8WWZ7 1642 aa36.34■■■■□ 3.41
CDKN2A-202ENST00000380150 TRHP20396 242 aaPredicted RBP36.29■■■■□ 3.4
CDKN2A-202ENST00000380150 WRNQ14191 1432 aaPredicted RBP eCLIP36.19■■■■□ 3.38
CDKN2A-202ENST00000380150 TOP2BQ02880 1626 aa36.16■■■■□ 3.38
CDKN2A-202ENST00000380150 BIVM-ERCC5R4GMW8 1640 aa36.16■■■■□ 3.38
CDKN2A-202ENST00000380150 GRIN2AQ12879 1464 aa36.09■■■■□ 3.37
CDKN2A-202ENST00000380150 ADAMTS12P58397 1594 aa36.07■■■■□ 3.37
CDKN2A-202ENST00000380150 ERCC6L2Q5T890 1561 aa36.03■■■■□ 3.36
CDKN2A-202ENST00000380150 CEP170Q5SW79 1584 aa36.01■■■■□ 3.35
CDKN2A-202ENST00000380150 NUP160Q12769 1436 aa35.96■■■■□ 3.35
CDKN2A-202ENST00000380150 FHAD1B1AJZ9 1412 aa35.93■■■■□ 3.34
CDKN2A-202ENST00000380150 ERICH3Q5RHP9 1530 aa35.88■■■■□ 3.33
CDKN2A-202ENST00000380150 SHROOM2Q13796 1616 aa35.81■■■■□ 3.32
CDKN2A-202ENST00000380150 PRG4Q92954 1404 aaPredicted RBP35.64■■■■□ 3.3
CDKN2A-202ENST00000380150 JPH4Q96JJ6 628 aa35.6■■■■□ 3.29
CDKN2A-202ENST00000380150 RUSC2Q8N2Y8 1516 aa35.57■■■■□ 3.29
CDKN2A-202ENST00000380150 IGF1RP08069 1367 aa35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms