RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.58
C9orf72-203ENST00000380003 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
C9orf72-203ENST00000380003 ABCC9O60706 1549 aa10.31□□□□□ -0.76
C9orf72-203ENST00000380003 CHIC1Q5VXU3 224 aa10.16□□□□□ -0.78
C9orf72-203ENST00000380003 CCDC180Q9P1Z9 1646 aa10.03□□□□□ -0.8
C9orf72-203ENST00000380003 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
C9orf72-203ENST00000380003 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
C9orf72-203ENST00000380003 DNAJC5BQ9UF47 199 aa9.71□□□□□ -0.85
C9orf72-203ENST00000380003 RB1CC1Q8TDY2 1594 aa9.62□□□□□ -0.87
C9orf72-203ENST00000380003 NACADO15069 1562 aa9.53□□□□□ -0.88
C9orf72-203ENST00000380003 UNC13AQ9UPW8 1703 aa9.45□□□□□ -0.9
C9orf72-203ENST00000380003 ZCCHC6Q5VYS8 1495 aaKnown RBP9.44□□□□□ -0.9
C9orf72-203ENST00000380003 SCRIBQ14160 1630 aa9.41□□□□□ -0.9
C9orf72-203ENST00000380003 BICRAQ9NZM4 1560 aa9.4□□□□□ -0.9
C9orf72-203ENST00000380003 SENP3Q9H4L4 574 aaPredicted RBP9.33□□□□□ -0.92
C9orf72-203ENST00000380003 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
C9orf72-203ENST00000380003 DCAF1Q9Y4B6 1507 aa9.25□□□□□ -0.93
C9orf72-203ENST00000380003 SHROOM4Q9ULL8 1493 aa9.25□□□□□ -0.93
C9orf72-203ENST00000380003 CC2D2AQ9P2K1 1620 aa9.21□□□□□ -0.94
C9orf72-203ENST00000380003 CECR2Q9BXF3 1484 aa9.2□□□□□ -0.94
C9orf72-203ENST00000380003 EIF4G1Q04637 1599 aaKnown RBP9.18□□□□□ -0.94
C9orf72-203ENST00000380003 PHF23Q9BUL5 403 aaPredicted RBP9.02□□□□□ -0.97
C9orf72-203ENST00000380003 ATAD2BQ9ULI0 1458 aa8.9□□□□□ -0.98
C9orf72-203ENST00000380003 NESP48681 1621 aa8.89□□□□□ -0.99
C9orf72-203ENST00000380003 MROH2BQ7Z745 1585 aa8.87□□□□□ -0.99
C9orf72-203ENST00000380003 SMARCA4P51532 1647 aa8.87□□□□□ -0.99
C9orf72-203ENST00000380003 NCAPD3P42695 1498 aa8.85□□□□□ -0.99
C9orf72-203ENST00000380003 ERCC6Q03468 1493 aa8.84□□□□□ -0.99
C9orf72-203ENST00000380003 BAZ1BQ9UIG0 1483 aaKnown RBP8.82□□□□□ -1
C9orf72-203ENST00000380003 BAZ1AQ9NRL2 1556 aaPredicted RBP8.8□□□□□ -1
C9orf72-203ENST00000380003 SMARCA2P51531 1590 aa8.79□□□□□ -1
C9orf72-203ENST00000380003 WIZO95785 1651 aa8.77□□□□□ -1.01
C9orf72-203ENST00000380003 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
C9orf72-203ENST00000380003 DNAJC5Q9H3Z4 198 aa8.73□□□□□ -1.01
C9orf72-203ENST00000380003 RSF1Q96T23 1441 aaPredicted RBP8.7□□□□□ -1.02
C9orf72-203ENST00000380003 PEG3Q9GZU2 1588 aa8.68□□□□□ -1.02
C9orf72-203ENST00000380003 CADPSQ9ULU8 1353 aa8.66□□□□□ -1.02
C9orf72-203ENST00000380003 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.02
C9orf72-203ENST00000380003 POTEDQ86YR6 584 aa8.65□□□□□ -1.03
C9orf72-203ENST00000380003 CUX2O14529 1486 aa8.63□□□□□ -1.03
C9orf72-203ENST00000380003 PDS5BQ9NTI5 1447 aa8.62□□□□□ -1.03
C9orf72-203ENST00000380003 SUPT5HO00267 1087 aaKnown RBP8.61□□□□□ -1.03
C9orf72-203ENST00000380003 LAMC3Q9Y6N6 1575 aa8.61□□□□□ -1.03
C9orf72-203ENST00000380003 THOC2Q8NI27 1593 aaKnown RBP8.6□□□□□ -1.03
C9orf72-203ENST00000380003 FANCD2Q9BXW9 1451 aa8.57□□□□□ -1.04
C9orf72-203ENST00000380003 TRIM41Q8WV44 630 aa8.57□□□□□ -1.04
C9orf72-203ENST00000380003 FOXD1Q16676 465 aa8.56□□□□□ -1.04
C9orf72-203ENST00000380003 CCDC88BA6NC98 1476 aa8.55□□□□□ -1.04
C9orf72-203ENST00000380003 CEP164Q9UPV0 1460 aa8.55□□□□□ -1.04
C9orf72-203ENST00000380003 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
C9orf72-203ENST00000380003 MRC2Q9UBG0 1479 aa8.54□□□□□ -1.04
C9orf72-203ENST00000380003 CFTRP13569 1480 aa8.54□□□□□ -1.04
C9orf72-203ENST00000380003 URB2Q14146 1524 aaKnown RBP8.51□□□□□ -1.05
C9orf72-203ENST00000380003 WDR62O43379 1518 aa8.48□□□□□ -1.05
C9orf72-203ENST00000380003 ZNF608Q9ULD9 1512 aaPredicted RBP8.47□□□□□ -1.05
C9orf72-203ENST00000380003 FBLN2P98095 1184 aa8.46□□□□□ -1.05
C9orf72-203ENST00000380003 OSCARQ8IYS5 282 aa8.43□□□□□ -1.06
C9orf72-203ENST00000380003 AQRO60306 1485 aaKnown RBP eCLIP8.42□□□□□ -1.06
C9orf72-203ENST00000380003 MSH5O43196 834 aa8.4□□□□□ -1.06
C9orf72-203ENST00000380003 RAD54L2Q9Y4B4 1467 aa8.4□□□□□ -1.06
C9orf72-203ENST00000380003 TOPBP1Q92547 1522 aa8.4□□□□□ -1.06
C9orf72-203ENST00000380003 TDRD9Q8NDG6 1382 aaKnown RBP8.4□□□□□ -1.06
C9orf72-203ENST00000380003 CYB5RLQ6IPT4 315 aa8.35□□□□□ -1.07
C9orf72-203ENST00000380003 POLA1P09884 1462 aaPredicted RBP8.34□□□□□ -1.07
C9orf72-203ENST00000380003 SOGA1O94964 1423 aa8.33□□□□□ -1.08
C9orf72-203ENST00000380003 IFT140Q96RY7 1462 aa8.32□□□□□ -1.08
C9orf72-203ENST00000380003 EIF4G3O43432 1585 aaKnown RBP8.31□□□□□ -1.08
C9orf72-203ENST00000380003 FGD5Q6ZNL6 1462 aa8.31□□□□□ -1.08
C9orf72-203ENST00000380003 PRDM2Q13029 1718 aa8.31□□□□□ -1.08
C9orf72-203ENST00000380003 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
C9orf72-203ENST00000380003 CUX1P39880 1505 aa8.3□□□□□ -1.08
C9orf72-203ENST00000380003 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
C9orf72-203ENST00000380003 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
C9orf72-203ENST00000380003 TARBP1Q13395 1621 aaKnown RBP8.28□□□□□ -1.08
C9orf72-203ENST00000380003 TRHP20396 242 aaPredicted RBP8.26□□□□□ -1.09
C9orf72-203ENST00000380003 SNAPC4Q5SXM2 1469 aa8.26□□□□□ -1.09
C9orf72-203ENST00000380003 RIMBP3CA6NJZ7 1639 aa8.25□□□□□ -1.09
C9orf72-203ENST00000380003 RIMBP3BA6NNM3 1639 aa8.25□□□□□ -1.09
C9orf72-203ENST00000380003 RIMBP3Q9UFD9 1639 aa8.25□□□□□ -1.09
C9orf72-203ENST00000380003 ARHGEF11O15085 1522 aa8.24□□□□□ -1.09
C9orf72-203ENST00000380003 CHD1O14646 1710 aa8.24□□□□□ -1.09
C9orf72-203ENST00000380003 TTBK1Q5TCY1 1321 aaPredicted RBP8.21□□□□□ -1.1
C9orf72-203ENST00000380003 GAPVD1Q14C86 1478 aa8.2□□□□□ -1.1
C9orf72-203ENST00000380003 WRNQ14191 1432 aaPredicted RBP eCLIP8.2□□□□□ -1.1
C9orf72-203ENST00000380003 SYNJ1O43426 1573 aa8.19□□□□□ -1.1
C9orf72-203ENST00000380003 ARAP1Q96P48 1450 aa8.18□□□□□ -1.1
C9orf72-203ENST00000380003 GRIN2BQ13224 1484 aa8.17□□□□□ -1.1
C9orf72-203ENST00000380003 SYNJ2O15056 1496 aa8.14□□□□□ -1.11
C9orf72-203ENST00000380003 ERCC6L2Q5T890 1561 aa8.14□□□□□ -1.11
C9orf72-203ENST00000380003 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
C9orf72-203ENST00000380003 MAGI1Q96QZ7 1491 aaPredicted RBP8.13□□□□□ -1.11
C9orf72-203ENST00000380003 PBRM1Q86U86 1689 aa8.12□□□□□ -1.11
C9orf72-203ENST00000380003 WDR97A6NE52 1622 aa8.11□□□□□ -1.11
C9orf72-203ENST00000380003 TOP2BQ02880 1626 aa8.11□□□□□ -1.11
C9orf72-203ENST00000380003 ABCA5Q8WWZ7 1642 aa8.1□□□□□ -1.11
C9orf72-203ENST00000380003 EHMT2Q96KQ7 1210 aa8.09□□□□□ -1.11
C9orf72-203ENST00000380003 GRIN2AQ12879 1464 aa8.09□□□□□ -1.11
C9orf72-203ENST00000380003 CLASP1Q7Z460 1538 aa8.09□□□□□ -1.11
C9orf72-203ENST00000380003 CEP170Q5SW79 1584 aa8.08□□□□□ -1.12
C9orf72-203ENST00000380003 JPH4Q96JJ6 628 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms