RNA–Protein interactions for RNA: ENST00000379825.6

APTX-206, Transcript of aprataxin, humanhuman

TSL 2 BASIC

Gene APTX, Length 2,023 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-206ENST00000379825 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
APTX-206ENST00000379825 CCDC180Q9P1Z9 1646 aa26.86■■□□□ 1.89
APTX-206ENST00000379825 ABCC9O60706 1549 aa26.29■■□□□ 1.8
APTX-206ENST00000379825 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
APTX-206ENST00000379825 NACADO15069 1562 aa25.25■■□□□ 1.63
APTX-206ENST00000379825 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
APTX-206ENST00000379825 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.61
APTX-206ENST00000379825 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
APTX-206ENST00000379825 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
APTX-206ENST00000379825 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
APTX-206ENST00000379825 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
APTX-206ENST00000379825 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
APTX-206ENST00000379825 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
APTX-206ENST00000379825 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
APTX-206ENST00000379825 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
APTX-206ENST00000379825 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
APTX-206ENST00000379825 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
APTX-206ENST00000379825 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
APTX-206ENST00000379825 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
APTX-206ENST00000379825 BAZ1AQ9NRL2 1556 aaPredicted RBP23.36■■□□□ 1.33
APTX-206ENST00000379825 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
APTX-206ENST00000379825 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
APTX-206ENST00000379825 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
APTX-206ENST00000379825 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
APTX-206ENST00000379825 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
APTX-206ENST00000379825 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
APTX-206ENST00000379825 BAZ1BQ9UIG0 1483 aaKnown RBP23.09■■□□□ 1.29
APTX-206ENST00000379825 WIZO95785 1651 aa22.97■■□□□ 1.27
APTX-206ENST00000379825 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
APTX-206ENST00000379825 NESP48681 1621 aa22.73■■□□□ 1.23
APTX-206ENST00000379825 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
APTX-206ENST00000379825 LAMC3Q9Y6N6 1575 aa22.7■■□□□ 1.22
APTX-206ENST00000379825 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
APTX-206ENST00000379825 CADPSQ9ULU8 1353 aa22.58■■□□□ 1.21
APTX-206ENST00000379825 PDS5BQ9NTI5 1447 aa22.52■■□□□ 1.2
APTX-206ENST00000379825 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
APTX-206ENST00000379825 CUX2O14529 1486 aa22.47■■□□□ 1.19
APTX-206ENST00000379825 CFTRP13569 1480 aa22.45■■□□□ 1.18
APTX-206ENST00000379825 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
APTX-206ENST00000379825 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
APTX-206ENST00000379825 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
APTX-206ENST00000379825 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
APTX-206ENST00000379825 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
APTX-206ENST00000379825 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
APTX-206ENST00000379825 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
APTX-206ENST00000379825 WDR62O43379 1518 aa22.24■■□□□ 1.15
APTX-206ENST00000379825 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
APTX-206ENST00000379825 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
APTX-206ENST00000379825 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
APTX-206ENST00000379825 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
APTX-206ENST00000379825 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
APTX-206ENST00000379825 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
APTX-206ENST00000379825 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
APTX-206ENST00000379825 CUX1P39880 1505 aa21.78■■□□□ 1.08
APTX-206ENST00000379825 TARBP1Q13395 1621 aaKnown RBP21.76■■□□□ 1.07
APTX-206ENST00000379825 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
APTX-206ENST00000379825 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
APTX-206ENST00000379825 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
APTX-206ENST00000379825 SOGA1O94964 1423 aa21.68■■□□□ 1.06
APTX-206ENST00000379825 RAD54L2Q9Y4B4 1467 aa21.67■■□□□ 1.06
APTX-206ENST00000379825 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.05
APTX-206ENST00000379825 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
APTX-206ENST00000379825 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
APTX-206ENST00000379825 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
APTX-206ENST00000379825 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
APTX-206ENST00000379825 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
APTX-206ENST00000379825 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
APTX-206ENST00000379825 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
APTX-206ENST00000379825 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
APTX-206ENST00000379825 ABCA5Q8WWZ7 1642 aa21.45■■□□□ 1.02
APTX-206ENST00000379825 CHD1O14646 1710 aa21.44■■□□□ 1.02
APTX-206ENST00000379825 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
APTX-206ENST00000379825 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
APTX-206ENST00000379825 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
APTX-206ENST00000379825 SNAPC4Q5SXM2 1469 aa21.42■■□□□ 1.02
APTX-206ENST00000379825 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
APTX-206ENST00000379825 FBLN2P98095 1184 aa21.36■■□□□ 1.01
APTX-206ENST00000379825 SYNJ2O15056 1496 aa21.32■■□□□ 1
APTX-206ENST00000379825 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
APTX-206ENST00000379825 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
APTX-206ENST00000379825 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
APTX-206ENST00000379825 RIMBP3CA6NJZ7 1639 aa21.2■□□□□ 0.98
APTX-206ENST00000379825 RIMBP3BA6NNM3 1639 aa21.2■□□□□ 0.98
APTX-206ENST00000379825 RIMBP3Q9UFD9 1639 aa21.2■□□□□ 0.98
APTX-206ENST00000379825 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
APTX-206ENST00000379825 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
APTX-206ENST00000379825 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
APTX-206ENST00000379825 GRIN2AQ12879 1464 aa21.17■□□□□ 0.98
APTX-206ENST00000379825 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
APTX-206ENST00000379825 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
APTX-206ENST00000379825 NUP160Q12769 1436 aa21.08■□□□□ 0.96
APTX-206ENST00000379825 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
APTX-206ENST00000379825 IGF1RP08069 1367 aa21.07■□□□□ 0.96
APTX-206ENST00000379825 CUL7Q14999 1698 aa21.07■□□□□ 0.96
APTX-206ENST00000379825 ARAP1Q96P48 1450 aa20.99■□□□□ 0.95
APTX-206ENST00000379825 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
APTX-206ENST00000379825 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
APTX-206ENST00000379825 SHROOM2Q13796 1616 aa20.95■□□□□ 0.94
APTX-206ENST00000379825 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
APTX-206ENST00000379825 ERCC6L2Q5T890 1561 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms