RNA–Protein interactions for RNA: ENST00000379726.7

SH3KBP1-204, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 5

Gene SH3KBP1, Length 1,941 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-204ENST00000379726 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
SH3KBP1-204ENST00000379726 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
SH3KBP1-204ENST00000379726 ABCC9O60706 1549 aa22.18■■□□□ 1.14
SH3KBP1-204ENST00000379726 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
SH3KBP1-204ENST00000379726 NACADO15069 1562 aa21.3■■□□□ 1
SH3KBP1-204ENST00000379726 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
SH3KBP1-204ENST00000379726 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
SH3KBP1-204ENST00000379726 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
SH3KBP1-204ENST00000379726 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
SH3KBP1-204ENST00000379726 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
SH3KBP1-204ENST00000379726 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
SH3KBP1-204ENST00000379726 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.91
SH3KBP1-204ENST00000379726 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
SH3KBP1-204ENST00000379726 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
SH3KBP1-204ENST00000379726 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
SH3KBP1-204ENST00000379726 EIF4G1Q04637 1599 aaKnown RBP20.14■□□□□ 0.82
SH3KBP1-204ENST00000379726 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
SH3KBP1-204ENST00000379726 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
SH3KBP1-204ENST00000379726 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
SH3KBP1-204ENST00000379726 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
SH3KBP1-204ENST00000379726 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
SH3KBP1-204ENST00000379726 MYT1Q01538 1121 aa19.74■□□□□ 0.75
SH3KBP1-204ENST00000379726 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
SH3KBP1-204ENST00000379726 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
SH3KBP1-204ENST00000379726 NCAPD3P42695 1498 aa19.66■□□□□ 0.74
SH3KBP1-204ENST00000379726 SMARCA2P51531 1590 aa19.64■□□□□ 0.73
SH3KBP1-204ENST00000379726 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
SH3KBP1-204ENST00000379726 HMGXB3Q12766 1538 aa19.57■□□□□ 0.72
SH3KBP1-204ENST00000379726 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
SH3KBP1-204ENST00000379726 WIZO95785 1651 aa19.48■□□□□ 0.71
SH3KBP1-204ENST00000379726 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
SH3KBP1-204ENST00000379726 HRCP23327 699 aa19.38■□□□□ 0.69
SH3KBP1-204ENST00000379726 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
SH3KBP1-204ENST00000379726 NESP48681 1621 aa19.21■□□□□ 0.67
SH3KBP1-204ENST00000379726 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
SH3KBP1-204ENST00000379726 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
SH3KBP1-204ENST00000379726 CUX2O14529 1486 aa19.11■□□□□ 0.65
SH3KBP1-204ENST00000379726 CADPSQ9ULU8 1353 aa19.08■□□□□ 0.64
SH3KBP1-204ENST00000379726 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
SH3KBP1-204ENST00000379726 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
SH3KBP1-204ENST00000379726 CFTRP13569 1480 aa18.99■□□□□ 0.63
SH3KBP1-204ENST00000379726 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
SH3KBP1-204ENST00000379726 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
SH3KBP1-204ENST00000379726 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
SH3KBP1-204ENST00000379726 THOC2Q8NI27 1593 aaKnown RBP18.92■□□□□ 0.62
SH3KBP1-204ENST00000379726 PRDM2Q13029 1718 aa18.87■□□□□ 0.61
SH3KBP1-204ENST00000379726 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
SH3KBP1-204ENST00000379726 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
SH3KBP1-204ENST00000379726 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.61
SH3KBP1-204ENST00000379726 MRC2Q9UBG0 1479 aa18.81■□□□□ 0.6
SH3KBP1-204ENST00000379726 WDR62O43379 1518 aa18.76■□□□□ 0.59
SH3KBP1-204ENST00000379726 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
SH3KBP1-204ENST00000379726 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
SH3KBP1-204ENST00000379726 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
SH3KBP1-204ENST00000379726 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
SH3KBP1-204ENST00000379726 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
SH3KBP1-204ENST00000379726 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
SH3KBP1-204ENST00000379726 CUX1P39880 1505 aa18.46■□□□□ 0.55
SH3KBP1-204ENST00000379726 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
SH3KBP1-204ENST00000379726 POLA1P09884 1462 aaPredicted RBP18.42■□□□□ 0.54
SH3KBP1-204ENST00000379726 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
SH3KBP1-204ENST00000379726 ZNF608Q9ULD9 1512 aaPredicted RBP18.38■□□□□ 0.53
SH3KBP1-204ENST00000379726 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
SH3KBP1-204ENST00000379726 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
SH3KBP1-204ENST00000379726 SOGA1O94964 1423 aa18.32■□□□□ 0.52
SH3KBP1-204ENST00000379726 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
SH3KBP1-204ENST00000379726 WRNQ14191 1432 aaPredicted RBP eCLIP18.31■□□□□ 0.52
SH3KBP1-204ENST00000379726 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
SH3KBP1-204ENST00000379726 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
SH3KBP1-204ENST00000379726 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
SH3KBP1-204ENST00000379726 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
SH3KBP1-204ENST00000379726 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.52
SH3KBP1-204ENST00000379726 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
SH3KBP1-204ENST00000379726 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
SH3KBP1-204ENST00000379726 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
SH3KBP1-204ENST00000379726 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
SH3KBP1-204ENST00000379726 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
SH3KBP1-204ENST00000379726 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
SH3KBP1-204ENST00000379726 ABCA5Q8WWZ7 1642 aa18.15■□□□□ 0.5
SH3KBP1-204ENST00000379726 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
SH3KBP1-204ENST00000379726 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
SH3KBP1-204ENST00000379726 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
SH3KBP1-204ENST00000379726 CHD1O14646 1710 aa18.09■□□□□ 0.49
SH3KBP1-204ENST00000379726 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
SH3KBP1-204ENST00000379726 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
SH3KBP1-204ENST00000379726 ACIN1Q9UKV3 1341 aaKnown RBP18.03■□□□□ 0.48
SH3KBP1-204ENST00000379726 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.47
SH3KBP1-204ENST00000379726 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.47
SH3KBP1-204ENST00000379726 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.47
SH3KBP1-204ENST00000379726 FBLN2P98095 1184 aa18■□□□□ 0.47
SH3KBP1-204ENST00000379726 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
SH3KBP1-204ENST00000379726 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
SH3KBP1-204ENST00000379726 ADAMTS12P58397 1594 aa17.96■□□□□ 0.47
SH3KBP1-204ENST00000379726 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
SH3KBP1-204ENST00000379726 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
SH3KBP1-204ENST00000379726 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
SH3KBP1-204ENST00000379726 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
SH3KBP1-204ENST00000379726 CLASP1Q7Z460 1538 aa17.89■□□□□ 0.45
SH3KBP1-204ENST00000379726 GRIN2AQ12879 1464 aa17.89■□□□□ 0.45
SH3KBP1-204ENST00000379726 IGF1RP08069 1367 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms