RNA–Protein interactions for RNA: ENST00000379721.3

SPINK4-201, Transcript of serine peptidase inhibitor, Kazal type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPINK4, Length 402 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPINK4-201ENST00000379721 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.49
SPINK4-201ENST00000379721 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
SPINK4-201ENST00000379721 ABCC9O60706 1549 aa26.85■■□□□ 1.89
SPINK4-201ENST00000379721 RB1CC1Q8TDY2 1594 aa25.76■■□□□ 1.71
SPINK4-201ENST00000379721 NACADO15069 1562 aa25.69■■□□□ 1.7
SPINK4-201ENST00000379721 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
SPINK4-201ENST00000379721 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
SPINK4-201ENST00000379721 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
SPINK4-201ENST00000379721 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
SPINK4-201ENST00000379721 UNC13AQ9UPW8 1703 aa25.22■■□□□ 1.63
SPINK4-201ENST00000379721 PABPN1Q86U42 306 aaKnown RBP eCLIP25.03■■□□□ 1.6
SPINK4-201ENST00000379721 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
SPINK4-201ENST00000379721 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
SPINK4-201ENST00000379721 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
SPINK4-201ENST00000379721 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.55
SPINK4-201ENST00000379721 EIF4G1Q04637 1599 aaKnown RBP24.34■■□□□ 1.49
SPINK4-201ENST00000379721 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
SPINK4-201ENST00000379721 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
SPINK4-201ENST00000379721 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
SPINK4-201ENST00000379721 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
SPINK4-201ENST00000379721 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
SPINK4-201ENST00000379721 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
SPINK4-201ENST00000379721 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
SPINK4-201ENST00000379721 HMGXB3Q12766 1538 aa23.57■■□□□ 1.36
SPINK4-201ENST00000379721 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
SPINK4-201ENST00000379721 PEG3Q9GZU2 1588 aa23.54■■□□□ 1.36
SPINK4-201ENST00000379721 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
SPINK4-201ENST00000379721 WIZO95785 1651 aa23.32■■□□□ 1.32
SPINK4-201ENST00000379721 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
SPINK4-201ENST00000379721 NESP48681 1621 aa23.18■■□□□ 1.3
SPINK4-201ENST00000379721 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
SPINK4-201ENST00000379721 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
SPINK4-201ENST00000379721 TOP2AP11388 1531 aaKnown RBP23.05■■□□□ 1.28
SPINK4-201ENST00000379721 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
SPINK4-201ENST00000379721 CUX2O14529 1486 aa22.98■■□□□ 1.27
SPINK4-201ENST00000379721 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
SPINK4-201ENST00000379721 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
SPINK4-201ENST00000379721 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
SPINK4-201ENST00000379721 CFTRP13569 1480 aa22.81■■□□□ 1.24
SPINK4-201ENST00000379721 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
SPINK4-201ENST00000379721 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
SPINK4-201ENST00000379721 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
SPINK4-201ENST00000379721 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
SPINK4-201ENST00000379721 PRDM2Q13029 1718 aa22.69■■□□□ 1.22
SPINK4-201ENST00000379721 WDR62O43379 1518 aa22.67■■□□□ 1.22
SPINK4-201ENST00000379721 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.19
SPINK4-201ENST00000379721 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
SPINK4-201ENST00000379721 DNAJC5Q9H3Z4 198 aa22.45■■□□□ 1.18
SPINK4-201ENST00000379721 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
SPINK4-201ENST00000379721 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
SPINK4-201ENST00000379721 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
SPINK4-201ENST00000379721 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
SPINK4-201ENST00000379721 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
SPINK4-201ENST00000379721 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
SPINK4-201ENST00000379721 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
SPINK4-201ENST00000379721 CUX1P39880 1505 aa22.12■■□□□ 1.13
SPINK4-201ENST00000379721 EIF4G3O43432 1585 aaKnown RBP22.1■■□□□ 1.13
SPINK4-201ENST00000379721 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
SPINK4-201ENST00000379721 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
SPINK4-201ENST00000379721 SOGA1O94964 1423 aa22.04■■□□□ 1.12
SPINK4-201ENST00000379721 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.11
SPINK4-201ENST00000379721 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
SPINK4-201ENST00000379721 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
SPINK4-201ENST00000379721 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
SPINK4-201ENST00000379721 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
SPINK4-201ENST00000379721 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
SPINK4-201ENST00000379721 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SPINK4-201ENST00000379721 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
SPINK4-201ENST00000379721 CHD1O14646 1710 aa21.86■■□□□ 1.09
SPINK4-201ENST00000379721 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
SPINK4-201ENST00000379721 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
SPINK4-201ENST00000379721 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
SPINK4-201ENST00000379721 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
SPINK4-201ENST00000379721 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
SPINK4-201ENST00000379721 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
SPINK4-201ENST00000379721 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
SPINK4-201ENST00000379721 FBLN2P98095 1184 aa21.76■■□□□ 1.07
SPINK4-201ENST00000379721 SYNJ2O15056 1496 aa21.7■■□□□ 1.06
SPINK4-201ENST00000379721 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
SPINK4-201ENST00000379721 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
SPINK4-201ENST00000379721 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
SPINK4-201ENST00000379721 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
SPINK4-201ENST00000379721 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
SPINK4-201ENST00000379721 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
SPINK4-201ENST00000379721 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
SPINK4-201ENST00000379721 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
SPINK4-201ENST00000379721 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
SPINK4-201ENST00000379721 GRIN2AQ12879 1464 aa21.54■■□□□ 1.04
SPINK4-201ENST00000379721 FHAD1B1AJZ9 1412 aa21.53■■□□□ 1.04
SPINK4-201ENST00000379721 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
SPINK4-201ENST00000379721 ARAP1Q96P48 1450 aa21.45■■□□□ 1.03
SPINK4-201ENST00000379721 CEP170Q5SW79 1584 aa21.45■■□□□ 1.02
SPINK4-201ENST00000379721 NUP160Q12769 1436 aa21.45■■□□□ 1.02
SPINK4-201ENST00000379721 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
SPINK4-201ENST00000379721 CUL7Q14999 1698 aa21.37■■□□□ 1.01
SPINK4-201ENST00000379721 IGF1RP08069 1367 aa21.37■■□□□ 1.01
SPINK4-201ENST00000379721 SHROOM2Q13796 1616 aa21.33■■□□□ 1
SPINK4-201ENST00000379721 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
SPINK4-201ENST00000379721 ERCC6L2Q5T890 1561 aa21.28■■□□□ 1
SPINK4-201ENST00000379721 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms