RNA–Protein interactions for RNA: ENST00000379226.8

APOO-201, Transcript of apolipoprotein O, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOO, Length 1,118 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOO-201ENST00000379226 NISCHQ9Y2I1 1504 aa28.32■■■□□ 2.12
APOO-201ENST00000379226 ABCC9O60706 1549 aa27.21■■□□□ 1.95
APOO-201ENST00000379226 DNAJC5BQ9UF47 199 aa26.63■■□□□ 1.85
APOO-201ENST00000379226 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
APOO-201ENST00000379226 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.74
APOO-201ENST00000379226 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
APOO-201ENST00000379226 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
APOO-201ENST00000379226 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
APOO-201ENST00000379226 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
APOO-201ENST00000379226 NACADO15069 1562 aa24.82■■□□□ 1.56
APOO-201ENST00000379226 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
APOO-201ENST00000379226 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
APOO-201ENST00000379226 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
APOO-201ENST00000379226 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
APOO-201ENST00000379226 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
APOO-201ENST00000379226 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
APOO-201ENST00000379226 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
APOO-201ENST00000379226 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
APOO-201ENST00000379226 CUX2O14529 1486 aa23.92■■□□□ 1.42
APOO-201ENST00000379226 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
APOO-201ENST00000379226 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
APOO-201ENST00000379226 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
APOO-201ENST00000379226 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
APOO-201ENST00000379226 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
APOO-201ENST00000379226 NESP48681 1621 aa23.02■■□□□ 1.28
APOO-201ENST00000379226 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
APOO-201ENST00000379226 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
APOO-201ENST00000379226 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
APOO-201ENST00000379226 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
APOO-201ENST00000379226 ATAD2BQ9ULI0 1458 aa22.7■■□□□ 1.22
APOO-201ENST00000379226 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
APOO-201ENST00000379226 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
APOO-201ENST00000379226 HMGXB3Q12766 1538 aa22.64■■□□□ 1.21
APOO-201ENST00000379226 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
APOO-201ENST00000379226 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
APOO-201ENST00000379226 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
APOO-201ENST00000379226 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
APOO-201ENST00000379226 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
APOO-201ENST00000379226 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
APOO-201ENST00000379226 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
APOO-201ENST00000379226 BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
APOO-201ENST00000379226 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
APOO-201ENST00000379226 WDR62O43379 1518 aa22.4■■□□□ 1.18
APOO-201ENST00000379226 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
APOO-201ENST00000379226 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
APOO-201ENST00000379226 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
APOO-201ENST00000379226 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
APOO-201ENST00000379226 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
APOO-201ENST00000379226 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
APOO-201ENST00000379226 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
APOO-201ENST00000379226 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
APOO-201ENST00000379226 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
APOO-201ENST00000379226 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
APOO-201ENST00000379226 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
APOO-201ENST00000379226 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
APOO-201ENST00000379226 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
APOO-201ENST00000379226 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
APOO-201ENST00000379226 CHD1O14646 1710 aa21.71■■□□□ 1.07
APOO-201ENST00000379226 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
APOO-201ENST00000379226 CFTRP13569 1480 aa21.66■■□□□ 1.06
APOO-201ENST00000379226 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
APOO-201ENST00000379226 FBLN2P98095 1184 aa21.58■■□□□ 1.05
APOO-201ENST00000379226 WIZO95785 1651 aa21.52■■□□□ 1.04
APOO-201ENST00000379226 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.02
APOO-201ENST00000379226 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.02
APOO-201ENST00000379226 TOPBP1Q92547 1522 aa21.39■■□□□ 1.02
APOO-201ENST00000379226 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
APOO-201ENST00000379226 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
APOO-201ENST00000379226 FOXD1Q16676 465 aa21.29■■□□□ 1
APOO-201ENST00000379226 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
APOO-201ENST00000379226 KDM4FA0A1W2PPD8 638 aa21.28■■□□□ 1
APOO-201ENST00000379226 SYNJ1O43426 1573 aa21.27■□□□□ 0.99
APOO-201ENST00000379226 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
APOO-201ENST00000379226 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
APOO-201ENST00000379226 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
APOO-201ENST00000379226 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
APOO-201ENST00000379226 KIF13AQ9H1H9 1805 aa21.16■□□□□ 0.98
APOO-201ENST00000379226 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
APOO-201ENST00000379226 POTEDQ86YR6 584 aa21.12■□□□□ 0.97
APOO-201ENST00000379226 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
APOO-201ENST00000379226 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
APOO-201ENST00000379226 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
APOO-201ENST00000379226 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
APOO-201ENST00000379226 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
APOO-201ENST00000379226 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
APOO-201ENST00000379226 SOGA1O94964 1423 aa20.98■□□□□ 0.95
APOO-201ENST00000379226 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
APOO-201ENST00000379226 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
APOO-201ENST00000379226 HECW2Q9P2P5 1572 aa20.93■□□□□ 0.94
APOO-201ENST00000379226 KDM6BO15054 1643 aa20.93■□□□□ 0.94
APOO-201ENST00000379226 FBXO41Q8TF61 875 aa20.92■□□□□ 0.94
APOO-201ENST00000379226 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
APOO-201ENST00000379226 FAM69CQ0P6D2 419 aa20.91■□□□□ 0.94
APOO-201ENST00000379226 ABCC10Q5T3U5 1492 aa20.84■□□□□ 0.93
APOO-201ENST00000379226 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
APOO-201ENST00000379226 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
APOO-201ENST00000379226 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
APOO-201ENST00000379226 FGD5Q6ZNL6 1462 aa20.79■□□□□ 0.92
APOO-201ENST00000379226 LMTK3Q96Q04 1460 aa20.77■□□□□ 0.92
APOO-201ENST00000379226 DIP2BQ9P265 1576 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms