RNA–Protein interactions for RNA: ENST00000378913.6

DCTN3-204, Transcript of dynactin subunit 3, humanhuman

TSL 1 (best) BASIC

Gene DCTN3, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3-204ENST00000378913 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
DCTN3-204ENST00000378913 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
DCTN3-204ENST00000378913 ABCC9O60706 1549 aa20.88■□□□□ 0.93
DCTN3-204ENST00000378913 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
DCTN3-204ENST00000378913 NACADO15069 1562 aa20.09■□□□□ 0.81
DCTN3-204ENST00000378913 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
DCTN3-204ENST00000378913 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
DCTN3-204ENST00000378913 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
DCTN3-204ENST00000378913 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
DCTN3-204ENST00000378913 UNC13AQ9UPW8 1703 aa19.79■□□□□ 0.76
DCTN3-204ENST00000378913 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
DCTN3-204ENST00000378913 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
DCTN3-204ENST00000378913 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
DCTN3-204ENST00000378913 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
DCTN3-204ENST00000378913 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
DCTN3-204ENST00000378913 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
DCTN3-204ENST00000378913 CC2D2AQ9P2K1 1620 aa18.93■□□□□ 0.62
DCTN3-204ENST00000378913 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
DCTN3-204ENST00000378913 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
DCTN3-204ENST00000378913 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
DCTN3-204ENST00000378913 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
DCTN3-204ENST00000378913 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
DCTN3-204ENST00000378913 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
DCTN3-204ENST00000378913 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
DCTN3-204ENST00000378913 PEG3Q9GZU2 1588 aa18.5■□□□□ 0.55
DCTN3-204ENST00000378913 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
DCTN3-204ENST00000378913 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
DCTN3-204ENST00000378913 WIZO95785 1651 aa18.35■□□□□ 0.53
DCTN3-204ENST00000378913 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
DCTN3-204ENST00000378913 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
DCTN3-204ENST00000378913 NESP48681 1621 aa18.09■□□□□ 0.49
DCTN3-204ENST00000378913 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
DCTN3-204ENST00000378913 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
DCTN3-204ENST00000378913 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
DCTN3-204ENST00000378913 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
DCTN3-204ENST00000378913 PRDM2Q13029 1718 aa17.89■□□□□ 0.46
DCTN3-204ENST00000378913 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
DCTN3-204ENST00000378913 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
DCTN3-204ENST00000378913 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
DCTN3-204ENST00000378913 CFTRP13569 1480 aa17.87■□□□□ 0.45
DCTN3-204ENST00000378913 CUX2O14529 1486 aa17.82■□□□□ 0.44
DCTN3-204ENST00000378913 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.44
DCTN3-204ENST00000378913 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
DCTN3-204ENST00000378913 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
DCTN3-204ENST00000378913 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
DCTN3-204ENST00000378913 WDR62O43379 1518 aa17.7■□□□□ 0.42
DCTN3-204ENST00000378913 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
DCTN3-204ENST00000378913 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
DCTN3-204ENST00000378913 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
DCTN3-204ENST00000378913 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
DCTN3-204ENST00000378913 CUX1P39880 1505 aa17.38■□□□□ 0.37
DCTN3-204ENST00000378913 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
DCTN3-204ENST00000378913 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
DCTN3-204ENST00000378913 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
DCTN3-204ENST00000378913 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
DCTN3-204ENST00000378913 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
DCTN3-204ENST00000378913 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
DCTN3-204ENST00000378913 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
DCTN3-204ENST00000378913 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
DCTN3-204ENST00000378913 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
DCTN3-204ENST00000378913 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
DCTN3-204ENST00000378913 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
DCTN3-204ENST00000378913 SOGA1O94964 1423 aa17.23■□□□□ 0.35
DCTN3-204ENST00000378913 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
DCTN3-204ENST00000378913 DNAJC5Q9H3Z4 198 aa17.21■□□□□ 0.35
DCTN3-204ENST00000378913 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
DCTN3-204ENST00000378913 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
DCTN3-204ENST00000378913 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
DCTN3-204ENST00000378913 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
DCTN3-204ENST00000378913 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
DCTN3-204ENST00000378913 CHD1O14646 1710 aa17.11■□□□□ 0.33
DCTN3-204ENST00000378913 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
DCTN3-204ENST00000378913 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
DCTN3-204ENST00000378913 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
DCTN3-204ENST00000378913 MAGI1Q96QZ7 1491 aaPredicted RBP17.03■□□□□ 0.32
DCTN3-204ENST00000378913 OSCARQ8IYS5 282 aa17■□□□□ 0.31
DCTN3-204ENST00000378913 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
DCTN3-204ENST00000378913 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
DCTN3-204ENST00000378913 ERICH3Q5RHP9 1530 aa16.95■□□□□ 0.3
DCTN3-204ENST00000378913 FBLN2P98095 1184 aa16.92■□□□□ 0.3
DCTN3-204ENST00000378913 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
DCTN3-204ENST00000378913 CLASP1Q7Z460 1538 aa16.87■□□□□ 0.29
DCTN3-204ENST00000378913 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
DCTN3-204ENST00000378913 KIF27Q86VH2 1401 aa16.86■□□□□ 0.29
DCTN3-204ENST00000378913 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
DCTN3-204ENST00000378913 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
DCTN3-204ENST00000378913 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
DCTN3-204ENST00000378913 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
DCTN3-204ENST00000378913 CUL7Q14999 1698 aa16.83■□□□□ 0.28
DCTN3-204ENST00000378913 ARHGEF11O15085 1522 aa16.82■□□□□ 0.28
DCTN3-204ENST00000378913 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
DCTN3-204ENST00000378913 NUP160Q12769 1436 aa16.78■□□□□ 0.28
DCTN3-204ENST00000378913 IGF1RP08069 1367 aa16.77■□□□□ 0.28
DCTN3-204ENST00000378913 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
DCTN3-204ENST00000378913 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
DCTN3-204ENST00000378913 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
DCTN3-204ENST00000378913 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
DCTN3-204ENST00000378913 CARMIL1Q5VZK9 1371 aa16.68■□□□□ 0.26
DCTN3-204ENST00000378913 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
DCTN3-204ENST00000378913 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms