RNA–Protein interactions for RNA: ENST00000378792.1

CCL21-202, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CCL21, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-202ENST00000378792 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
CCL21-202ENST00000378792 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
CCL21-202ENST00000378792 ABCC9O60706 1549 aa22.97■■□□□ 1.27
CCL21-202ENST00000378792 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
CCL21-202ENST00000378792 NACADO15069 1562 aa22.07■■□□□ 1.12
CCL21-202ENST00000378792 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
CCL21-202ENST00000378792 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
CCL21-202ENST00000378792 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
CCL21-202ENST00000378792 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
CCL21-202ENST00000378792 UNC13AQ9UPW8 1703 aa21.47■■□□□ 1.03
CCL21-202ENST00000378792 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
CCL21-202ENST00000378792 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
CCL21-202ENST00000378792 SCRIBQ14160 1630 aa21.29■■□□□ 1
CCL21-202ENST00000378792 SHROOM4Q9ULL8 1493 aa21.27■■□□□ 1
CCL21-202ENST00000378792 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
CCL21-202ENST00000378792 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
CCL21-202ENST00000378792 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.92
CCL21-202ENST00000378792 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
CCL21-202ENST00000378792 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
CCL21-202ENST00000378792 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
CCL21-202ENST00000378792 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
CCL21-202ENST00000378792 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
CCL21-202ENST00000378792 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
CCL21-202ENST00000378792 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
CCL21-202ENST00000378792 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
CCL21-202ENST00000378792 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
CCL21-202ENST00000378792 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
CCL21-202ENST00000378792 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
CCL21-202ENST00000378792 WIZO95785 1651 aa19.96■□□□□ 0.79
CCL21-202ENST00000378792 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
CCL21-202ENST00000378792 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
CCL21-202ENST00000378792 LAMC3Q9Y6N6 1575 aa19.84■□□□□ 0.77
CCL21-202ENST00000378792 NESP48681 1621 aa19.8■□□□□ 0.76
CCL21-202ENST00000378792 TOP2AP11388 1531 aaKnown RBP19.8■□□□□ 0.76
CCL21-202ENST00000378792 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
CCL21-202ENST00000378792 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
CCL21-202ENST00000378792 CUX2O14529 1486 aa19.72■□□□□ 0.75
CCL21-202ENST00000378792 CFTRP13569 1480 aa19.6■□□□□ 0.73
CCL21-202ENST00000378792 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
CCL21-202ENST00000378792 CCDC88BA6NC98 1476 aa19.55■□□□□ 0.72
CCL21-202ENST00000378792 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
CCL21-202ENST00000378792 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
CCL21-202ENST00000378792 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
CCL21-202ENST00000378792 MRC2Q9UBG0 1479 aa19.51■□□□□ 0.71
CCL21-202ENST00000378792 WDR62O43379 1518 aa19.42■□□□□ 0.7
CCL21-202ENST00000378792 PRDM2Q13029 1718 aa19.41■□□□□ 0.7
CCL21-202ENST00000378792 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
CCL21-202ENST00000378792 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.68
CCL21-202ENST00000378792 ABCC8Q09428 1581 aa19.27■□□□□ 0.67
CCL21-202ENST00000378792 TOPBP1Q92547 1522 aa19.17■□□□□ 0.66
CCL21-202ENST00000378792 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
CCL21-202ENST00000378792 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
CCL21-202ENST00000378792 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
CCL21-202ENST00000378792 SOGA1O94964 1423 aa18.97■□□□□ 0.63
CCL21-202ENST00000378792 CUX1P39880 1505 aa18.95■□□□□ 0.62
CCL21-202ENST00000378792 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
CCL21-202ENST00000378792 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
CCL21-202ENST00000378792 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
CCL21-202ENST00000378792 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
CCL21-202ENST00000378792 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.62
CCL21-202ENST00000378792 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
CCL21-202ENST00000378792 RAD54L2Q9Y4B4 1467 aa18.89■□□□□ 0.61
CCL21-202ENST00000378792 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCL21-202ENST00000378792 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
CCL21-202ENST00000378792 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.61
CCL21-202ENST00000378792 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
CCL21-202ENST00000378792 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
CCL21-202ENST00000378792 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
CCL21-202ENST00000378792 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
CCL21-202ENST00000378792 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
CCL21-202ENST00000378792 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
CCL21-202ENST00000378792 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
CCL21-202ENST00000378792 FBLN2P98095 1184 aa18.73■□□□□ 0.59
CCL21-202ENST00000378792 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
CCL21-202ENST00000378792 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
CCL21-202ENST00000378792 ABCA5Q8WWZ7 1642 aa18.66■□□□□ 0.58
CCL21-202ENST00000378792 CHD1O14646 1710 aa18.66■□□□□ 0.58
CCL21-202ENST00000378792 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
CCL21-202ENST00000378792 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
CCL21-202ENST00000378792 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
CCL21-202ENST00000378792 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
CCL21-202ENST00000378792 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
CCL21-202ENST00000378792 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
CCL21-202ENST00000378792 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
CCL21-202ENST00000378792 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
CCL21-202ENST00000378792 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
CCL21-202ENST00000378792 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
CCL21-202ENST00000378792 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
CCL21-202ENST00000378792 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
CCL21-202ENST00000378792 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
CCL21-202ENST00000378792 NUP160Q12769 1436 aa18.41■□□□□ 0.54
CCL21-202ENST00000378792 IGF1RP08069 1367 aa18.4■□□□□ 0.54
CCL21-202ENST00000378792 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
CCL21-202ENST00000378792 CUL7Q14999 1698 aa18.38■□□□□ 0.53
CCL21-202ENST00000378792 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
CCL21-202ENST00000378792 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
CCL21-202ENST00000378792 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
CCL21-202ENST00000378792 JPH4Q96JJ6 628 aa18.27■□□□□ 0.52
CCL21-202ENST00000378792 SHROOM2Q13796 1616 aa18.26■□□□□ 0.51
CCL21-202ENST00000378792 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms