RNA–Protein interactions for RNA: ENST00000378598.4

TMEM52-202, Transcript of transmembrane protein 52, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM52, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM52-202ENST00000378598 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
TMEM52-202ENST00000378598 CCDC180Q9P1Z9 1646 aa40.6■■■■■ 4.09
TMEM52-202ENST00000378598 ABCC9O60706 1549 aa39.92■■■■□ 3.98
TMEM52-202ENST00000378598 RB1CC1Q8TDY2 1594 aa38.31■■■■□ 3.72
TMEM52-202ENST00000378598 NACADO15069 1562 aa38.24■■■■□ 3.71
TMEM52-202ENST00000378598 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
TMEM52-202ENST00000378598 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
TMEM52-202ENST00000378598 ZCCHC6Q5VYS8 1495 aaKnown RBP37.96■■■■□ 3.67
TMEM52-202ENST00000378598 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
TMEM52-202ENST00000378598 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
TMEM52-202ENST00000378598 PABPN1Q86U42 306 aaKnown RBP eCLIP37.31■■■■□ 3.56
TMEM52-202ENST00000378598 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
TMEM52-202ENST00000378598 SCRIBQ14160 1630 aa37.03■■■■□ 3.52
TMEM52-202ENST00000378598 DNAJC5BQ9UF47 199 aa36.85■■■■□ 3.49
TMEM52-202ENST00000378598 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.48
TMEM52-202ENST00000378598 EIF4G1Q04637 1599 aaKnown RBP36.2■■■■□ 3.39
TMEM52-202ENST00000378598 CC2D2AQ9P2K1 1620 aa36.09■■■■□ 3.37
TMEM52-202ENST00000378598 CECR2Q9BXF3 1484 aa35.9■■■■□ 3.34
TMEM52-202ENST00000378598 SMARCA4P51532 1647 aa35.42■■■■□ 3.26
TMEM52-202ENST00000378598 BAZ1AQ9NRL2 1556 aaPredicted RBP35.36■■■■□ 3.25
TMEM52-202ENST00000378598 NCAPD3P42695 1498 aa35.32■■■■□ 3.24
TMEM52-202ENST00000378598 ATAD2BQ9ULI0 1458 aa35.3■■■■□ 3.24
TMEM52-202ENST00000378598 SMARCA2P51531 1590 aa35.23■■■■□ 3.23
TMEM52-202ENST00000378598 MROH2BQ7Z745 1585 aa35.16■■■■□ 3.22
TMEM52-202ENST00000378598 PEG3Q9GZU2 1588 aa35.09■■■■□ 3.21
TMEM52-202ENST00000378598 HMGXB3Q12766 1538 aa35.09■■■■□ 3.21
TMEM52-202ENST00000378598 BAZ1BQ9UIG0 1483 aaKnown RBP34.98■■■■□ 3.19
TMEM52-202ENST00000378598 WIZO95785 1651 aa34.75■■■■□ 3.15
TMEM52-202ENST00000378598 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
TMEM52-202ENST00000378598 NESP48681 1621 aa34.5■■■■□ 3.11
TMEM52-202ENST00000378598 ERCC6Q03468 1493 aa34.41■■■■□ 3.1
TMEM52-202ENST00000378598 LAMC3Q9Y6N6 1575 aa34.38■■■■□ 3.09
TMEM52-202ENST00000378598 TOP2AP11388 1531 aaKnown RBP34.38■■■■□ 3.09
TMEM52-202ENST00000378598 CADPSQ9ULU8 1353 aa34.28■■■■□ 3.08
TMEM52-202ENST00000378598 PDS5BQ9NTI5 1447 aa34.17■■■■□ 3.06
TMEM52-202ENST00000378598 CUX2O14529 1486 aa34.12■■■■□ 3.05
TMEM52-202ENST00000378598 KIF21AQ7Z4S6 1674 aa34.05■■■■□ 3.04
TMEM52-202ENST00000378598 CFTRP13569 1480 aa34.03■■■■□ 3.04
TMEM52-202ENST00000378598 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
TMEM52-202ENST00000378598 THOC2Q8NI27 1593 aaKnown RBP33.98■■■■□ 3.03
TMEM52-202ENST00000378598 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
TMEM52-202ENST00000378598 CEP164Q9UPV0 1460 aa33.83■■■■□ 3.01
TMEM52-202ENST00000378598 MRC2Q9UBG0 1479 aa33.82■■■■□ 3.01
TMEM52-202ENST00000378598 WDR62O43379 1518 aa33.71■■■□□ 2.99
TMEM52-202ENST00000378598 SUPT5HO00267 1087 aaKnown RBP33.7■■■□□ 2.99
TMEM52-202ENST00000378598 PRDM2Q13029 1718 aa33.68■■■□□ 2.98
TMEM52-202ENST00000378598 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
TMEM52-202ENST00000378598 URB2Q14146 1524 aaKnown RBP33.53■■■□□ 2.96
TMEM52-202ENST00000378598 TOPBP1Q92547 1522 aa33.3■■■□□ 2.92
TMEM52-202ENST00000378598 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
TMEM52-202ENST00000378598 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
TMEM52-202ENST00000378598 IFT140Q96RY7 1462 aa33.14■■■□□ 2.9
TMEM52-202ENST00000378598 POLA1P09884 1462 aaPredicted RBP33.01■■■□□ 2.88
TMEM52-202ENST00000378598 ZNF608Q9ULD9 1512 aaPredicted RBP33.01■■■□□ 2.87
TMEM52-202ENST00000378598 CUX1P39880 1505 aa32.98■■■□□ 2.87
TMEM52-202ENST00000378598 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.86
TMEM52-202ENST00000378598 FGD5Q6ZNL6 1462 aa32.91■■■□□ 2.86
TMEM52-202ENST00000378598 SOGA1O94964 1423 aa32.89■■■□□ 2.86
TMEM52-202ENST00000378598 RAD54L2Q9Y4B4 1467 aa32.87■■■□□ 2.85
TMEM52-202ENST00000378598 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
TMEM52-202ENST00000378598 AQRO60306 1485 aaKnown RBP eCLIP32.81■■■□□ 2.84
TMEM52-202ENST00000378598 WRNQ14191 1432 aaPredicted RBP eCLIP32.73■■■□□ 2.83
TMEM52-202ENST00000378598 TDRD9Q8NDG6 1382 aaKnown RBP32.72■■■□□ 2.83
TMEM52-202ENST00000378598 OSCARQ8IYS5 282 aa32.72■■■□□ 2.83
TMEM52-202ENST00000378598 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
TMEM52-202ENST00000378598 TOP2BQ02880 1626 aa32.65■■■□□ 2.82
TMEM52-202ENST00000378598 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
TMEM52-202ENST00000378598 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
TMEM52-202ENST00000378598 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
TMEM52-202ENST00000378598 GRIN2BQ13224 1484 aa32.51■■■□□ 2.79
TMEM52-202ENST00000378598 GAPVD1Q14C86 1478 aa32.49■■■□□ 2.79
TMEM52-202ENST00000378598 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
TMEM52-202ENST00000378598 FBLN2P98095 1184 aa32.45■■■□□ 2.79
TMEM52-202ENST00000378598 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
TMEM52-202ENST00000378598 MAGI1Q96QZ7 1491 aaPredicted RBP32.44■■■□□ 2.78
TMEM52-202ENST00000378598 CHD1O14646 1710 aa32.44■■■□□ 2.78
TMEM52-202ENST00000378598 PBRM1Q86U86 1689 aa32.38■■■□□ 2.77
TMEM52-202ENST00000378598 CHMP7Q8WUX9 453 aaPredicted RBP32.35■■■□□ 2.77
TMEM52-202ENST00000378598 SYNJ2O15056 1496 aa32.32■■■□□ 2.76
TMEM52-202ENST00000378598 ERICH3Q5RHP9 1530 aa32.18■■■□□ 2.74
TMEM52-202ENST00000378598 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
TMEM52-202ENST00000378598 RIMBP3CA6NJZ7 1639 aa32.15■■■□□ 2.74
TMEM52-202ENST00000378598 RIMBP3BA6NNM3 1639 aa32.15■■■□□ 2.74
TMEM52-202ENST00000378598 RIMBP3Q9UFD9 1639 aa32.15■■■□□ 2.74
TMEM52-202ENST00000378598 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
TMEM52-202ENST00000378598 TRIM41Q8WV44 630 aa32.13■■■□□ 2.73
TMEM52-202ENST00000378598 CLASP1Q7Z460 1538 aa32.12■■■□□ 2.73
TMEM52-202ENST00000378598 FHAD1B1AJZ9 1412 aa32.12■■■□□ 2.73
TMEM52-202ENST00000378598 GRIN2AQ12879 1464 aa32.09■■■□□ 2.73
TMEM52-202ENST00000378598 KIF27Q86VH2 1401 aa32.06■■■□□ 2.72
TMEM52-202ENST00000378598 IGF1RP08069 1367 aa31.97■■■□□ 2.71
TMEM52-202ENST00000378598 NUP160Q12769 1436 aa31.97■■■□□ 2.71
TMEM52-202ENST00000378598 CEP170Q5SW79 1584 aa31.93■■■□□ 2.7
TMEM52-202ENST00000378598 CYB5RLQ6IPT4 315 aa31.89■■■□□ 2.7
TMEM52-202ENST00000378598 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
TMEM52-202ENST00000378598 CUL7Q14999 1698 aa31.83■■■□□ 2.69
TMEM52-202ENST00000378598 CARMIL1Q5VZK9 1371 aa31.77■■■□□ 2.68
TMEM52-202ENST00000378598 SHROOM2Q13796 1616 aa31.72■■■□□ 2.67
TMEM52-202ENST00000378598 RUSC2Q8N2Y8 1516 aa31.71■■■□□ 2.67
TMEM52-202ENST00000378598 ERCC6L2Q5T890 1561 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms