RNA–Protein interactions for RNA: ENST00000378428.3

SLC13A4-202, Transcript of solute carrier family 13 member 4, humanhuman

TSL 4

Gene SLC13A4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4-202ENST00000378428 NISCHQ9Y2I1 1504 aa38.84■■■■□ 3.81
SLC13A4-202ENST00000378428 CCDC180Q9P1Z9 1646 aa34.63■■■■□ 3.13
SLC13A4-202ENST00000378428 ABCC9O60706 1549 aa34.2■■■■□ 3.07
SLC13A4-202ENST00000378428 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
SLC13A4-202ENST00000378428 DCAF8L2P0C7V8 631 aa32.59■■■□□ 2.81
SLC13A4-202ENST00000378428 NACADO15069 1562 aa32.58■■■□□ 2.81
SLC13A4-202ENST00000378428 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
SLC13A4-202ENST00000378428 MYO15BQ96JP2 1530 aa32.24■■■□□ 2.75
SLC13A4-202ENST00000378428 UNC13AQ9UPW8 1703 aa32.05■■■□□ 2.72
SLC13A4-202ENST00000378428 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
SLC13A4-202ENST00000378428 PABPN1Q86U42 306 aaKnown RBP eCLIP31.91■■■□□ 2.7
SLC13A4-202ENST00000378428 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
SLC13A4-202ENST00000378428 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
SLC13A4-202ENST00000378428 DNAJC5BQ9UF47 199 aa31.6■■■□□ 2.65
SLC13A4-202ENST00000378428 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
SLC13A4-202ENST00000378428 EIF4G1Q04637 1599 aaKnown RBP30.95■■■□□ 2.54
SLC13A4-202ENST00000378428 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
SLC13A4-202ENST00000378428 CECR2Q9BXF3 1484 aa30.71■■■□□ 2.51
SLC13A4-202ENST00000378428 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
SLC13A4-202ENST00000378428 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
SLC13A4-202ENST00000378428 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
SLC13A4-202ENST00000378428 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
SLC13A4-202ENST00000378428 SMARCA2P51531 1590 aa30.01■■■□□ 2.39
SLC13A4-202ENST00000378428 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
SLC13A4-202ENST00000378428 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
SLC13A4-202ENST00000378428 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
SLC13A4-202ENST00000378428 BAZ1BQ9UIG0 1483 aaKnown RBP29.84■■■□□ 2.37
SLC13A4-202ENST00000378428 WIZO95785 1651 aa29.68■■■□□ 2.34
SLC13A4-202ENST00000378428 NESP48681 1621 aa29.55■■■□□ 2.32
SLC13A4-202ENST00000378428 RSF1Q96T23 1441 aaPredicted RBP29.51■■■□□ 2.31
SLC13A4-202ENST00000378428 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
SLC13A4-202ENST00000378428 LAMC3Q9Y6N6 1575 aa29.33■■■□□ 2.29
SLC13A4-202ENST00000378428 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
SLC13A4-202ENST00000378428 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
SLC13A4-202ENST00000378428 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
SLC13A4-202ENST00000378428 CUX2O14529 1486 aa29.17■■■□□ 2.26
SLC13A4-202ENST00000378428 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
SLC13A4-202ENST00000378428 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
SLC13A4-202ENST00000378428 CFTRP13569 1480 aa28.97■■■□□ 2.23
SLC13A4-202ENST00000378428 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
SLC13A4-202ENST00000378428 FANCD2Q9BXW9 1451 aa28.9■■■□□ 2.22
SLC13A4-202ENST00000378428 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
SLC13A4-202ENST00000378428 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
SLC13A4-202ENST00000378428 WDR62O43379 1518 aa28.8■■■□□ 2.2
SLC13A4-202ENST00000378428 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
SLC13A4-202ENST00000378428 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
SLC13A4-202ENST00000378428 DNAJC5Q9H3Z4 198 aa28.64■■■□□ 2.18
SLC13A4-202ENST00000378428 SUPT5HO00267 1087 aaKnown RBP28.63■■■□□ 2.17
SLC13A4-202ENST00000378428 TOPBP1Q92547 1522 aa28.42■■■□□ 2.14
SLC13A4-202ENST00000378428 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
SLC13A4-202ENST00000378428 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
SLC13A4-202ENST00000378428 IFT140Q96RY7 1462 aa28.26■■■□□ 2.11
SLC13A4-202ENST00000378428 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
SLC13A4-202ENST00000378428 POLA1P09884 1462 aaPredicted RBP28.16■■■□□ 2.1
SLC13A4-202ENST00000378428 CUX1P39880 1505 aa28.14■■■□□ 2.1
SLC13A4-202ENST00000378428 TARBP1Q13395 1621 aaKnown RBP28.13■■■□□ 2.09
SLC13A4-202ENST00000378428 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
SLC13A4-202ENST00000378428 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
SLC13A4-202ENST00000378428 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
SLC13A4-202ENST00000378428 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.08
SLC13A4-202ENST00000378428 SOGA1O94964 1423 aa28.01■■■□□ 2.07
SLC13A4-202ENST00000378428 TDRD9Q8NDG6 1382 aaKnown RBP27.93■■■□□ 2.06
SLC13A4-202ENST00000378428 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
SLC13A4-202ENST00000378428 WDR97A6NE52 1622 aa27.88■■■□□ 2.05
SLC13A4-202ENST00000378428 SYNJ1O43426 1573 aa27.85■■■□□ 2.05
SLC13A4-202ENST00000378428 WRNQ14191 1432 aaPredicted RBP eCLIP27.83■■■□□ 2.05
SLC13A4-202ENST00000378428 CHD1O14646 1710 aa27.82■■■□□ 2.04
SLC13A4-202ENST00000378428 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
SLC13A4-202ENST00000378428 TOP2BQ02880 1626 aa27.8■■■□□ 2.04
SLC13A4-202ENST00000378428 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
SLC13A4-202ENST00000378428 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
SLC13A4-202ENST00000378428 FBLN2P98095 1184 aa27.73■■■□□ 2.03
SLC13A4-202ENST00000378428 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
SLC13A4-202ENST00000378428 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.03
SLC13A4-202ENST00000378428 GRIN2BQ13224 1484 aa27.7■■■□□ 2.03
SLC13A4-202ENST00000378428 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
SLC13A4-202ENST00000378428 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.02
SLC13A4-202ENST00000378428 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
SLC13A4-202ENST00000378428 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
SLC13A4-202ENST00000378428 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
SLC13A4-202ENST00000378428 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
SLC13A4-202ENST00000378428 SYNJ2O15056 1496 aa27.57■■■□□ 2
SLC13A4-202ENST00000378428 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
SLC13A4-202ENST00000378428 ARHGEF11O15085 1522 aa27.54■■■□□ 2
SLC13A4-202ENST00000378428 ADAMTS12P58397 1594 aa27.47■■□□□ 1.99
SLC13A4-202ENST00000378428 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
SLC13A4-202ENST00000378428 ERICH3Q5RHP9 1530 aa27.39■■□□□ 1.98
SLC13A4-202ENST00000378428 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
SLC13A4-202ENST00000378428 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
SLC13A4-202ENST00000378428 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
SLC13A4-202ENST00000378428 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
SLC13A4-202ENST00000378428 CYB5RLQ6IPT4 315 aa27.27■■□□□ 1.96
SLC13A4-202ENST00000378428 NUP160Q12769 1436 aa27.24■■□□□ 1.95
SLC13A4-202ENST00000378428 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
SLC13A4-202ENST00000378428 ERCC6L2Q5T890 1561 aa27.15■■□□□ 1.94
SLC13A4-202ENST00000378428 IGF1RP08069 1367 aa27.15■■□□□ 1.94
SLC13A4-202ENST00000378428 CUL7Q14999 1698 aa27.12■■□□□ 1.93
SLC13A4-202ENST00000378428 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
SLC13A4-202ENST00000378428 RUSC2Q8N2Y8 1516 aa27.08■■□□□ 1.93
SLC13A4-202ENST00000378428 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms