RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 NISCHQ9Y2I1 1504 aa37.88■■■■□ 3.65
RAB4B-202ENST00000378307 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
RAB4B-202ENST00000378307 ABCC9O60706 1549 aa33.31■■■□□ 2.92
RAB4B-202ENST00000378307 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
RAB4B-202ENST00000378307 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
RAB4B-202ENST00000378307 NACADO15069 1562 aa31.75■■■□□ 2.67
RAB4B-202ENST00000378307 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
RAB4B-202ENST00000378307 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
RAB4B-202ENST00000378307 DCAF1Q9Y4B6 1507 aa31.27■■■□□ 2.6
RAB4B-202ENST00000378307 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
RAB4B-202ENST00000378307 PABPN1Q86U42 306 aaKnown RBP eCLIP31.13■■■□□ 2.57
RAB4B-202ENST00000378307 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
RAB4B-202ENST00000378307 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
RAB4B-202ENST00000378307 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
RAB4B-202ENST00000378307 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
RAB4B-202ENST00000378307 EIF4G1Q04637 1599 aaKnown RBP30.15■■■□□ 2.42
RAB4B-202ENST00000378307 CC2D2AQ9P2K1 1620 aa30.1■■■□□ 2.41
RAB4B-202ENST00000378307 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
RAB4B-202ENST00000378307 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
RAB4B-202ENST00000378307 ATAD2BQ9ULI0 1458 aa29.35■■■□□ 2.29
RAB4B-202ENST00000378307 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
RAB4B-202ENST00000378307 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
RAB4B-202ENST00000378307 MROH2BQ7Z745 1585 aa29.23■■■□□ 2.27
RAB4B-202ENST00000378307 SMARCA2P51531 1590 aa29.22■■■□□ 2.27
RAB4B-202ENST00000378307 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
RAB4B-202ENST00000378307 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
RAB4B-202ENST00000378307 BAZ1BQ9UIG0 1483 aaKnown RBP29.05■■■□□ 2.24
RAB4B-202ENST00000378307 WIZO95785 1651 aa28.92■■■□□ 2.22
RAB4B-202ENST00000378307 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
RAB4B-202ENST00000378307 NESP48681 1621 aa28.79■■■□□ 2.2
RAB4B-202ENST00000378307 ERCC6Q03468 1493 aa28.65■■■□□ 2.18
RAB4B-202ENST00000378307 LAMC3Q9Y6N6 1575 aa28.57■■■□□ 2.16
RAB4B-202ENST00000378307 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
RAB4B-202ENST00000378307 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
RAB4B-202ENST00000378307 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
RAB4B-202ENST00000378307 CUX2O14529 1486 aa28.4■■■□□ 2.14
RAB4B-202ENST00000378307 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
RAB4B-202ENST00000378307 THOC2Q8NI27 1593 aaKnown RBP28.34■■■□□ 2.13
RAB4B-202ENST00000378307 CFTRP13569 1480 aa28.27■■■□□ 2.12
RAB4B-202ENST00000378307 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
RAB4B-202ENST00000378307 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
RAB4B-202ENST00000378307 MRC2Q9UBG0 1479 aa28.13■■■□□ 2.09
RAB4B-202ENST00000378307 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
RAB4B-202ENST00000378307 WDR62O43379 1518 aa28.05■■■□□ 2.08
RAB4B-202ENST00000378307 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
RAB4B-202ENST00000378307 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
RAB4B-202ENST00000378307 SUPT5HO00267 1087 aaKnown RBP27.92■■■□□ 2.06
RAB4B-202ENST00000378307 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
RAB4B-202ENST00000378307 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
RAB4B-202ENST00000378307 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
RAB4B-202ENST00000378307 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
RAB4B-202ENST00000378307 IFT140Q96RY7 1462 aa27.52■■■□□ 2
RAB4B-202ENST00000378307 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■■□□ 2
RAB4B-202ENST00000378307 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
RAB4B-202ENST00000378307 CUX1P39880 1505 aa27.42■■□□□ 1.98
RAB4B-202ENST00000378307 TARBP1Q13395 1621 aaKnown RBP27.42■■□□□ 1.98
RAB4B-202ENST00000378307 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
RAB4B-202ENST00000378307 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
RAB4B-202ENST00000378307 EIF4G3O43432 1585 aaKnown RBP27.34■■□□□ 1.97
RAB4B-202ENST00000378307 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.962e-6■■□□□ 13
RAB4B-202ENST00000378307 SOGA1O94964 1423 aa27.32■■□□□ 1.96
RAB4B-202ENST00000378307 TDRD9Q8NDG6 1382 aaKnown RBP27.23■■□□□ 1.95
RAB4B-202ENST00000378307 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
RAB4B-202ENST00000378307 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
RAB4B-202ENST00000378307 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
RAB4B-202ENST00000378307 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
RAB4B-202ENST00000378307 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
RAB4B-202ENST00000378307 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
RAB4B-202ENST00000378307 CHD1O14646 1710 aa27.07■■□□□ 1.92
RAB4B-202ENST00000378307 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
RAB4B-202ENST00000378307 SNAPC4Q5SXM2 1469 aa27.02■■□□□ 1.92
RAB4B-202ENST00000378307 FBLN2P98095 1184 aa27.01■■□□□ 1.91
RAB4B-202ENST00000378307 GRIN2BQ13224 1484 aa26.99■■□□□ 1.91
RAB4B-202ENST00000378307 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
RAB4B-202ENST00000378307 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
RAB4B-202ENST00000378307 PBRM1Q86U86 1689 aa26.95■■□□□ 1.91
RAB4B-202ENST00000378307 MAGI1Q96QZ7 1491 aaPredicted RBP26.93■■□□□ 1.9
RAB4B-202ENST00000378307 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
RAB4B-202ENST00000378307 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
RAB4B-202ENST00000378307 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
RAB4B-202ENST00000378307 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
RAB4B-202ENST00000378307 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
RAB4B-202ENST00000378307 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
RAB4B-202ENST00000378307 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
RAB4B-202ENST00000378307 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
RAB4B-202ENST00000378307 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
RAB4B-202ENST00000378307 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
RAB4B-202ENST00000378307 GRIN2AQ12879 1464 aa26.67■■□□□ 1.86
RAB4B-202ENST00000378307 FHAD1B1AJZ9 1412 aa26.65■■□□□ 1.86
RAB4B-202ENST00000378307 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
RAB4B-202ENST00000378307 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
RAB4B-202ENST00000378307 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
RAB4B-202ENST00000378307 NUP160Q12769 1436 aa26.56■■□□□ 1.84
RAB4B-202ENST00000378307 IGF1RP08069 1367 aa26.54■■□□□ 1.84
RAB4B-202ENST00000378307 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
RAB4B-202ENST00000378307 ERCC6L2Q5T890 1561 aa26.44■■□□□ 1.82
RAB4B-202ENST00000378307 CUL7Q14999 1698 aa26.39■■□□□ 1.82
RAB4B-202ENST00000378307 SHROOM2Q13796 1616 aa26.39■■□□□ 1.81
RAB4B-202ENST00000378307 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
RAB4B-202ENST00000378307 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 1279.1 ms