RNA–Protein interactions for RNA: ENST00000378201.6

RPP38-202, Transcript of ribonuclease P/MRP subunit p38, humanhuman

TSL 5

Gene RPP38, Length 833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-202ENST00000378201 NISCHQ9Y2I1 1504 aa53.67■■■■■ 6.18
RPP38-202ENST00000378201 CCDC180Q9P1Z9 1646 aa47.73■■■■■ 5.23
RPP38-202ENST00000378201 ABCC9O60706 1549 aa47.32■■■■■ 5.17
RPP38-202ENST00000378201 DCAF8L2P0C7V8 631 aa45.28■■■■■ 4.84
RPP38-202ENST00000378201 RB1CC1Q8TDY2 1594 aa45.21■■■■■ 4.83
RPP38-202ENST00000378201 NACADO15069 1562 aa45.07■■■■■ 4.8
RPP38-202ENST00000378201 MYO15BQ96JP2 1530 aa44.61■■■■■ 4.73
RPP38-202ENST00000378201 ZCCHC6Q5VYS8 1495 aaKnown RBP44.59■■■■■ 4.73
RPP38-202ENST00000378201 DCAF1Q9Y4B6 1507 aa44.29■■■■■ 4.68
RPP38-202ENST00000378201 PABPN1Q86U42 306 aaKnown RBP eCLIP44.27■■■■■ 4.68
RPP38-202ENST00000378201 UNC13AQ9UPW8 1703 aa44.09■■■■■ 4.65
RPP38-202ENST00000378201 DNAJC5BQ9UF47 199 aa43.88■■■■■ 4.62
RPP38-202ENST00000378201 BICRAQ9NZM4 1560 aa43.87■■■■■ 4.61
RPP38-202ENST00000378201 SCRIBQ14160 1630 aa43.68■■■■■ 4.58
RPP38-202ENST00000378201 SHROOM4Q9ULL8 1493 aa43.26■■■■■ 4.52
RPP38-202ENST00000378201 EIF4G1Q04637 1599 aaKnown RBP42.75■■■■■ 4.43
RPP38-202ENST00000378201 CC2D2AQ9P2K1 1620 aa42.69■■■■■ 4.42
RPP38-202ENST00000378201 CECR2Q9BXF3 1484 aa42.53■■■■■ 4.4
RPP38-202ENST00000378201 SMARCA4P51532 1647 aa41.69■■■■■ 4.26
RPP38-202ENST00000378201 NCAPD3P42695 1498 aa41.65■■■■■ 4.26
RPP38-202ENST00000378201 ATAD2BQ9ULI0 1458 aa41.63■■■■■ 4.25
RPP38-202ENST00000378201 BAZ1AQ9NRL2 1556 aaPredicted RBP41.59■■■■■ 4.25
RPP38-202ENST00000378201 SMARCA2P51531 1590 aa41.49■■■■■ 4.23
RPP38-202ENST00000378201 MROH2BQ7Z745 1585 aa41.39■■■■■ 4.22
RPP38-202ENST00000378201 HMGXB3Q12766 1538 aa41.32■■■■■ 4.2
RPP38-202ENST00000378201 BAZ1BQ9UIG0 1483 aaKnown RBP41.26■■■■■ 4.2
RPP38-202ENST00000378201 PEG3Q9GZU2 1588 aa41.24■■■■■ 4.19
RPP38-202ENST00000378201 WIZO95785 1651 aa40.9■■■■■ 4.14
RPP38-202ENST00000378201 NESP48681 1621 aa40.82■■■■■ 4.13
RPP38-202ENST00000378201 ERCC6Q03468 1493 aa40.8■■■■■ 4.12
RPP38-202ENST00000378201 RSF1Q96T23 1441 aaPredicted RBP40.8■■■■■ 4.12
RPP38-202ENST00000378201 LAMC3Q9Y6N6 1575 aa40.53■■■■■ 4.08
RPP38-202ENST00000378201 CADPSQ9ULU8 1353 aa40.46■■■■■ 4.07
RPP38-202ENST00000378201 CUX2O14529 1486 aa40.41■■■■■ 4.06
RPP38-202ENST00000378201 TOP2AP11388 1531 aaKnown RBP40.4■■■■■ 4.06
RPP38-202ENST00000378201 PDS5BQ9NTI5 1447 aa40.37■■■■■ 4.05
RPP38-202ENST00000378201 KIF21AQ7Z4S6 1674 aa40.2■■■■■ 4.03
RPP38-202ENST00000378201 THOC2Q8NI27 1593 aaKnown RBP40.15■■■■■ 4.02
RPP38-202ENST00000378201 CFTRP13569 1480 aa40.09■■■■■ 4.01
RPP38-202ENST00000378201 CCDC88BA6NC98 1476 aa40.03■■■■■ 4
RPP38-202ENST00000378201 FANCD2Q9BXW9 1451 aa39.97■■■■□ 3.99
RPP38-202ENST00000378201 MRC2Q9UBG0 1479 aa39.95■■■■□ 3.99
RPP38-202ENST00000378201 CEP164Q9UPV0 1460 aa39.93■■■■□ 3.98
RPP38-202ENST00000378201 WDR62O43379 1518 aa39.79■■■■□ 3.96
RPP38-202ENST00000378201 DNAJC5Q9H3Z4 198 aa39.77■■■■□ 3.96
RPP38-202ENST00000378201 SUPT5HO00267 1087 aaKnown RBP39.66■■■■□ 3.94
RPP38-202ENST00000378201 URB2Q14146 1524 aaKnown RBP39.59■■■■□ 3.93
RPP38-202ENST00000378201 PRDM2Q13029 1718 aa39.55■■■■□ 3.92
RPP38-202ENST00000378201 TOPBP1Q92547 1522 aa39.27■■■■□ 3.88
RPP38-202ENST00000378201 ABCC8Q09428 1581 aa39.21■■■■□ 3.87
RPP38-202ENST00000378201 DNMBPQ6XZF7 1577 aa39.14■■■■□ 3.86
RPP38-202ENST00000378201 IFT140Q96RY7 1462 aa39.11■■■■□ 3.85
RPP38-202ENST00000378201 ZNF608Q9ULD9 1512 aaPredicted RBP39.02■■■■□ 3.84
RPP38-202ENST00000378201 POLA1P09884 1462 aaPredicted RBP38.92■■■■□ 3.82
RPP38-202ENST00000378201 CUX1P39880 1505 aa38.84■■■■□ 3.81
RPP38-202ENST00000378201 OSCARQ8IYS5 282 aa38.83■■■■□ 3.81
RPP38-202ENST00000378201 RAD54L2Q9Y4B4 1467 aa38.83■■■■□ 3.81
RPP38-202ENST00000378201 SOGA1O94964 1423 aa38.82■■■■□ 3.81
RPP38-202ENST00000378201 TARBP1Q13395 1621 aaKnown RBP38.81■■■■□ 3.8
RPP38-202ENST00000378201 AQRO60306 1485 aaKnown RBP eCLIP38.79■■■■□ 3.8
RPP38-202ENST00000378201 FGD5Q6ZNL6 1462 aa38.78■■■■□ 3.8
RPP38-202ENST00000378201 EIF4G3O43432 1585 aaKnown RBP38.74■■■■□ 3.79
RPP38-202ENST00000378201 TDRD9Q8NDG6 1382 aaKnown RBP38.69■■■■□ 3.78
RPP38-202ENST00000378201 FBLN2P98095 1184 aa38.51■■■■□ 3.76
RPP38-202ENST00000378201 WRNQ14191 1432 aaPredicted RBP eCLIP38.47■■■■□ 3.75
RPP38-202ENST00000378201 WDR97A6NE52 1622 aa38.39■■■■□ 3.74
RPP38-202ENST00000378201 TRIM41Q8WV44 630 aa38.39■■■■□ 3.74
RPP38-202ENST00000378201 SNAPC4Q5SXM2 1469 aa38.36■■■■□ 3.73
RPP38-202ENST00000378201 SYNJ1O43426 1573 aa38.36■■■■□ 3.73
RPP38-202ENST00000378201 ABCA10Q8WWZ4 1543 aa38.35■■■■□ 3.73
RPP38-202ENST00000378201 GRIN2BQ13224 1484 aa38.35■■■■□ 3.73
RPP38-202ENST00000378201 TOP2BQ02880 1626 aa38.34■■■■□ 3.73
RPP38-202ENST00000378201 GAPVD1Q14C86 1478 aa38.32■■■■□ 3.72
RPP38-202ENST00000378201 CHD1O14646 1710 aa38.3■■■■□ 3.72
RPP38-202ENST00000378201 BIVM-ERCC5R4GMW8 1640 aa38.3■■■■□ 3.72
RPP38-202ENST00000378201 CHMP7Q8WUX9 453 aaPredicted RBP38.29■■■■□ 3.72
RPP38-202ENST00000378201 MAGI1Q96QZ7 1491 aaPredicted RBP38.24■■■■□ 3.71
RPP38-202ENST00000378201 ABCA5Q8WWZ7 1642 aa38.17■■■■□ 3.7
RPP38-202ENST00000378201 SYNJ2O15056 1496 aa38.14■■■■□ 3.7
RPP38-202ENST00000378201 PBRM1Q86U86 1689 aa38.13■■■■□ 3.69
RPP38-202ENST00000378201 RIMBP3CA6NJZ7 1639 aa38.1■■■■□ 3.69
RPP38-202ENST00000378201 RIMBP3BA6NNM3 1639 aa38.1■■■■□ 3.69
RPP38-202ENST00000378201 RIMBP3Q9UFD9 1639 aa38.1■■■■□ 3.69
RPP38-202ENST00000378201 ARHGEF11O15085 1522 aa38.08■■■■□ 3.69
RPP38-202ENST00000378201 CYB5RLQ6IPT4 315 aa37.93■■■■□ 3.66
RPP38-202ENST00000378201 CLASP1Q7Z460 1538 aa37.92■■■■□ 3.66
RPP38-202ENST00000378201 ERICH3Q5RHP9 1530 aa37.86■■■■□ 3.65
RPP38-202ENST00000378201 FHAD1B1AJZ9 1412 aa37.85■■■■□ 3.65
RPP38-202ENST00000378201 ADAMTS12P58397 1594 aa37.85■■■■□ 3.65
RPP38-202ENST00000378201 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
RPP38-202ENST00000378201 ARAP1Q96P48 1450 aa37.77■■■■□ 3.64
RPP38-202ENST00000378201 KIF27Q86VH2 1401 aa37.7■■■■□ 3.63
RPP38-202ENST00000378201 NUP160Q12769 1436 aa37.69■■■■□ 3.62
RPP38-202ENST00000378201 CEP170Q5SW79 1584 aa37.66■■■■□ 3.62
RPP38-202ENST00000378201 IGF1RP08069 1367 aa37.66■■■■□ 3.62
RPP38-202ENST00000378201 ERCC6L2Q5T890 1561 aa37.44■■■■□ 3.58
RPP38-202ENST00000378201 JPH4Q96JJ6 628 aa37.43■■■■□ 3.58
RPP38-202ENST00000378201 CARMIL1Q5VZK9 1371 aa37.42■■■■□ 3.58
RPP38-202ENST00000378201 CUL7Q14999 1698 aa37.39■■■■□ 3.58
RPP38-202ENST00000378201 SHROOM2Q13796 1616 aa37.36■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms