RNA–Protein interactions for RNA: ENST00000377883.7

USP30-202, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-202ENST00000377883 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
USP30-202ENST00000377883 CCDC180Q9P1Z9 1646 aa41.67■■■■■ 4.26
USP30-202ENST00000377883 ABCC9O60706 1549 aa41.66■■■■■ 4.26
USP30-202ENST00000377883 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
USP30-202ENST00000377883 NACADO15069 1562 aa39.46■■■■□ 3.91
USP30-202ENST00000377883 DCAF8L2P0C7V8 631 aa39.38■■■■□ 3.89
USP30-202ENST00000377883 DNAJC5BQ9UF47 199 aa39.07■■■■□ 3.85
USP30-202ENST00000377883 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
USP30-202ENST00000377883 PABPN1Q86U42 306 aaKnown RBP eCLIP38.87■■■■□ 3.81
USP30-202ENST00000377883 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
USP30-202ENST00000377883 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
USP30-202ENST00000377883 BICRAQ9NZM4 1560 aa38.48■■■■□ 3.75
USP30-202ENST00000377883 DCAF1Q9Y4B6 1507 aa38.45■■■■□ 3.75
USP30-202ENST00000377883 SHROOM4Q9ULL8 1493 aa38.04■■■■□ 3.68
USP30-202ENST00000377883 SCRIBQ14160 1630 aa37.97■■■■□ 3.67
USP30-202ENST00000377883 CC2D2AQ9P2K1 1620 aa37.61■■■■□ 3.61
USP30-202ENST00000377883 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
USP30-202ENST00000377883 CECR2Q9BXF3 1484 aa37.55■■■■□ 3.6
USP30-202ENST00000377883 NCAPD3P42695 1498 aa36.45■■■■□ 3.43
USP30-202ENST00000377883 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
USP30-202ENST00000377883 SMARCA4P51532 1647 aa36.24■■■■□ 3.39
USP30-202ENST00000377883 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
USP30-202ENST00000377883 HMGXB3Q12766 1538 aa36.12■■■■□ 3.37
USP30-202ENST00000377883 BAZ1AQ9NRL2 1556 aaPredicted RBP36.11■■■■□ 3.37
USP30-202ENST00000377883 ERCC6Q03468 1493 aa36.01■■■■□ 3.36
USP30-202ENST00000377883 BAZ1BQ9UIG0 1483 aaKnown RBP35.97■■■■□ 3.35
USP30-202ENST00000377883 CUX2O14529 1486 aa35.92■■■■□ 3.34
USP30-202ENST00000377883 PEG3Q9GZU2 1588 aa35.9■■■■□ 3.34
USP30-202ENST00000377883 DNAJC5Q9H3Z4 198 aa35.9■■■■□ 3.34
USP30-202ENST00000377883 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
USP30-202ENST00000377883 NESP48681 1621 aa35.79■■■■□ 3.32
USP30-202ENST00000377883 LAMC3Q9Y6N6 1575 aa35.57■■■■□ 3.28
USP30-202ENST00000377883 PDS5BQ9NTI5 1447 aa35.44■■■■□ 3.26
USP30-202ENST00000377883 WIZO95785 1651 aa35.37■■■■□ 3.25
USP30-202ENST00000377883 CADPSQ9ULU8 1353 aa35.37■■■■□ 3.25
USP30-202ENST00000377883 THOC2Q8NI27 1593 aaKnown RBP35.36■■■■□ 3.25
USP30-202ENST00000377883 KIF21AQ7Z4S6 1674 aa35.28■■■■□ 3.24
USP30-202ENST00000377883 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
USP30-202ENST00000377883 MRC2Q9UBG0 1479 aa35.07■■■■□ 3.2
USP30-202ENST00000377883 TOP2AP11388 1531 aaKnown RBP34.96■■■■□ 3.19
USP30-202ENST00000377883 WDR62O43379 1518 aa34.95■■■■□ 3.19
USP30-202ENST00000377883 CFTRP13569 1480 aa34.94■■■■□ 3.18
USP30-202ENST00000377883 CEP164Q9UPV0 1460 aa34.94■■■■□ 3.18
USP30-202ENST00000377883 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
USP30-202ENST00000377883 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
USP30-202ENST00000377883 URB2Q14146 1524 aaKnown RBP34.59■■■■□ 3.13
USP30-202ENST00000377883 PRDM2Q13029 1718 aa34.49■■■■□ 3.11
USP30-202ENST00000377883 OSCARQ8IYS5 282 aa34.4■■■■□ 3.1
USP30-202ENST00000377883 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
USP30-202ENST00000377883 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
USP30-202ENST00000377883 ABCC8Q09428 1581 aa34.26■■■■□ 3.07
USP30-202ENST00000377883 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
USP30-202ENST00000377883 ZNF608Q9ULD9 1512 aaPredicted RBP34.15■■■■□ 3.06
USP30-202ENST00000377883 DNMBPQ6XZF7 1577 aa34.11■■■■□ 3.05
USP30-202ENST00000377883 EIF4G3O43432 1585 aaKnown RBP33.92■■■■□ 3.02
USP30-202ENST00000377883 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
USP30-202ENST00000377883 AQRO60306 1485 aaKnown RBP eCLIP33.89■■■■□ 3.02
USP30-202ENST00000377883 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
USP30-202ENST00000377883 SOGA1O94964 1423 aa33.81■■■■□ 3
USP30-202ENST00000377883 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
USP30-202ENST00000377883 RIMBP3CA6NJZ7 1639 aa33.78■■■■□ 3
USP30-202ENST00000377883 RIMBP3BA6NNM3 1639 aa33.78■■■■□ 3
USP30-202ENST00000377883 RIMBP3Q9UFD9 1639 aa33.78■■■■□ 3
USP30-202ENST00000377883 FBLN2P98095 1184 aa33.74■■■□□ 2.99
USP30-202ENST00000377883 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
USP30-202ENST00000377883 SUPT5HO00267 1087 aaKnown RBP33.71■■■□□ 2.99
USP30-202ENST00000377883 ARHGEF11O15085 1522 aa33.69■■■□□ 2.98
USP30-202ENST00000377883 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
USP30-202ENST00000377883 CHD1O14646 1710 aa33.66■■■□□ 2.98
USP30-202ENST00000377883 CUX1P39880 1505 aa33.65■■■□□ 2.98
USP30-202ENST00000377883 WDR97A6NE52 1622 aa33.6■■■□□ 2.97
USP30-202ENST00000377883 CYB5RLQ6IPT4 315 aa33.56■■■□□ 2.96
USP30-202ENST00000377883 SNAPC4Q5SXM2 1469 aa33.52■■■□□ 2.96
USP30-202ENST00000377883 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
USP30-202ENST00000377883 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
USP30-202ENST00000377883 MAGI1Q96QZ7 1491 aaPredicted RBP33.47■■■□□ 2.95
USP30-202ENST00000377883 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
USP30-202ENST00000377883 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
USP30-202ENST00000377883 SYNJ2O15056 1496 aa33.36■■■□□ 2.93
USP30-202ENST00000377883 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
USP30-202ENST00000377883 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
USP30-202ENST00000377883 CLASP1Q7Z460 1538 aa33.3■■■□□ 2.92
USP30-202ENST00000377883 WRNQ14191 1432 aaPredicted RBP eCLIP33.26■■■□□ 2.91
USP30-202ENST00000377883 PBRM1Q86U86 1689 aa33.25■■■□□ 2.91
USP30-202ENST00000377883 ABCA5Q8WWZ7 1642 aa33.2■■■□□ 2.91
USP30-202ENST00000377883 TRHP20396 242 aaPredicted RBP33.18■■■□□ 2.9
USP30-202ENST00000377883 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
USP30-202ENST00000377883 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
USP30-202ENST00000377883 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
USP30-202ENST00000377883 FHAD1B1AJZ9 1412 aa32.97■■■□□ 2.87
USP30-202ENST00000377883 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
USP30-202ENST00000377883 NUP160Q12769 1436 aa32.93■■■□□ 2.86
USP30-202ENST00000377883 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
USP30-202ENST00000377883 CEP170Q5SW79 1584 aa32.86■■■□□ 2.85
USP30-202ENST00000377883 ERCC6L2Q5T890 1561 aa32.77■■■□□ 2.84
USP30-202ENST00000377883 SHROOM2Q13796 1616 aa32.71■■■□□ 2.83
USP30-202ENST00000377883 JPH4Q96JJ6 628 aa32.69■■■□□ 2.82
USP30-202ENST00000377883 PRG4Q92954 1404 aaPredicted RBP32.63■■■□□ 2.81
USP30-202ENST00000377883 KIF27Q86VH2 1401 aa32.58■■■□□ 2.81
USP30-202ENST00000377883 IGF1RP08069 1367 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms