RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
COMMD6-202ENST00000377612 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
COMMD6-202ENST00000377612 ABCC9O60706 1549 aa39.64■■■■□ 3.94
COMMD6-202ENST00000377612 RB1CC1Q8TDY2 1594 aa37.93■■■■□ 3.66
COMMD6-202ENST00000377612 NACADO15069 1562 aa37.74■■■■□ 3.63
COMMD6-202ENST00000377612 UNC13AQ9UPW8 1703 aa37.44■■■■□ 3.58
COMMD6-202ENST00000377612 MYO15BQ96JP2 1530 aa37.33■■■■□ 3.57
COMMD6-202ENST00000377612 DCAF8L2P0C7V8 631 aa37.29■■■■□ 3.56
COMMD6-202ENST00000377612 ZCCHC6Q5VYS8 1495 aaKnown RBP37.25■■■■□ 3.55
COMMD6-202ENST00000377612 DCAF1Q9Y4B6 1507 aa37.01■■■■□ 3.52
COMMD6-202ENST00000377612 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
COMMD6-202ENST00000377612 PABPN1Q86U42 306 aaKnown RBP eCLIP36.82■■■■□ 3.48
COMMD6-202ENST00000377612 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
COMMD6-202ENST00000377612 SCRIBQ14160 1630 aa36.6■■■■□ 3.45
COMMD6-202ENST00000377612 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
COMMD6-202ENST00000377612 CC2D2AQ9P2K1 1620 aa35.94■■■■□ 3.34
COMMD6-202ENST00000377612 EIF4G1Q04637 1599 aaKnown RBP35.93■■■■□ 3.34
COMMD6-202ENST00000377612 CECR2Q9BXF3 1484 aa35.64■■■■□ 3.3
COMMD6-202ENST00000377612 SMARCA4P51532 1647 aa34.95■■■■□ 3.19
COMMD6-202ENST00000377612 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
COMMD6-202ENST00000377612 ATAD2BQ9ULI0 1458 aa34.76■■■■□ 3.15
COMMD6-202ENST00000377612 BAZ1AQ9NRL2 1556 aaPredicted RBP34.73■■■■□ 3.15
COMMD6-202ENST00000377612 SMARCA2P51531 1590 aa34.7■■■■□ 3.14
COMMD6-202ENST00000377612 HMGXB3Q12766 1538 aa34.67■■■■□ 3.14
COMMD6-202ENST00000377612 PEG3Q9GZU2 1588 aa34.59■■■■□ 3.13
COMMD6-202ENST00000377612 MROH2BQ7Z745 1585 aa34.55■■■■□ 3.12
COMMD6-202ENST00000377612 BAZ1BQ9UIG0 1483 aaKnown RBP34.43■■■■□ 3.1
COMMD6-202ENST00000377612 WIZO95785 1651 aa34.25■■■■□ 3.07
COMMD6-202ENST00000377612 NESP48681 1621 aa34.22■■■■□ 3.07
COMMD6-202ENST00000377612 ERCC6Q03468 1493 aa34.12■■■■□ 3.05
COMMD6-202ENST00000377612 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
COMMD6-202ENST00000377612 CUX2O14529 1486 aa33.99■■■■□ 3.03
COMMD6-202ENST00000377612 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
COMMD6-202ENST00000377612 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
COMMD6-202ENST00000377612 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
COMMD6-202ENST00000377612 TOP2AP11388 1531 aaKnown RBP33.76■■■■□ 3
COMMD6-202ENST00000377612 CADPSQ9ULU8 1353 aa33.67■■■□□ 2.98
COMMD6-202ENST00000377612 PDS5BQ9NTI5 1447 aa33.63■■■□□ 2.97
COMMD6-202ENST00000377612 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
COMMD6-202ENST00000377612 MRC2Q9UBG0 1479 aa33.46■■■□□ 2.95
COMMD6-202ENST00000377612 WDR62O43379 1518 aa33.46■■■□□ 2.95
COMMD6-202ENST00000377612 CFTRP13569 1480 aa33.45■■■□□ 2.95
COMMD6-202ENST00000377612 DNAJC5Q9H3Z4 198 aa33.41■■■□□ 2.94
COMMD6-202ENST00000377612 CEP164Q9UPV0 1460 aa33.38■■■□□ 2.93
COMMD6-202ENST00000377612 FANCD2Q9BXW9 1451 aa33.37■■■□□ 2.93
COMMD6-202ENST00000377612 CCDC88BA6NC98 1476 aa33.28■■■□□ 2.92
COMMD6-202ENST00000377612 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
COMMD6-202ENST00000377612 TOPBP1Q92547 1522 aa32.84■■■□□ 2.85
COMMD6-202ENST00000377612 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
COMMD6-202ENST00000377612 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
COMMD6-202ENST00000377612 ZNF608Q9ULD9 1512 aaPredicted RBP32.67■■■□□ 2.82
COMMD6-202ENST00000377612 ABCC8Q09428 1581 aa32.66■■■□□ 2.82
COMMD6-202ENST00000377612 EIF4G3O43432 1585 aaKnown RBP32.64■■■□□ 2.82
COMMD6-202ENST00000377612 TARBP1Q13395 1621 aaKnown RBP32.62■■■□□ 2.81
COMMD6-202ENST00000377612 POLA1P09884 1462 aaPredicted RBP32.52■■■□□ 2.8
COMMD6-202ENST00000377612 CUX1P39880 1505 aa32.45■■■□□ 2.78
COMMD6-202ENST00000377612 SUPT5HO00267 1087 aaKnown RBP32.44■■■□□ 2.78
COMMD6-202ENST00000377612 CHD1O14646 1710 aa32.42■■■□□ 2.78
COMMD6-202ENST00000377612 WDR97A6NE52 1622 aa32.38■■■□□ 2.77
COMMD6-202ENST00000377612 FGD5Q6ZNL6 1462 aa32.37■■■□□ 2.77
COMMD6-202ENST00000377612 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
COMMD6-202ENST00000377612 AQRO60306 1485 aaKnown RBP eCLIP32.33■■■□□ 2.77
COMMD6-202ENST00000377612 OSCARQ8IYS5 282 aa32.27■■■□□ 2.76
COMMD6-202ENST00000377612 SOGA1O94964 1423 aa32.23■■■□□ 2.75
COMMD6-202ENST00000377612 RIMBP3CA6NJZ7 1639 aa32.2■■■□□ 2.75
COMMD6-202ENST00000377612 RIMBP3BA6NNM3 1639 aa32.2■■■□□ 2.75
COMMD6-202ENST00000377612 RIMBP3Q9UFD9 1639 aa32.2■■■□□ 2.75
COMMD6-202ENST00000377612 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
COMMD6-202ENST00000377612 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
COMMD6-202ENST00000377612 BIVM-ERCC5R4GMW8 1640 aa32.13■■■□□ 2.73
COMMD6-202ENST00000377612 SNAPC4Q5SXM2 1469 aa32.09■■■□□ 2.73
COMMD6-202ENST00000377612 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
COMMD6-202ENST00000377612 SYNJ1O43426 1573 aa32.07■■■□□ 2.72
COMMD6-202ENST00000377612 TRIM41Q8WV44 630 aa32.07■■■□□ 2.72
COMMD6-202ENST00000377612 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
COMMD6-202ENST00000377612 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
COMMD6-202ENST00000377612 ABCA10Q8WWZ4 1543 aa32■■■□□ 2.71
COMMD6-202ENST00000377612 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
COMMD6-202ENST00000377612 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
COMMD6-202ENST00000377612 GAPVD1Q14C86 1478 aa31.92■■■□□ 2.7
COMMD6-202ENST00000377612 CLASP1Q7Z460 1538 aa31.92■■■□□ 2.7
COMMD6-202ENST00000377612 WRNQ14191 1432 aaPredicted RBP eCLIP31.91■■■□□ 2.7
COMMD6-202ENST00000377612 SYNJ2O15056 1496 aa31.85■■■□□ 2.69
COMMD6-202ENST00000377612 FBLN2P98095 1184 aa31.85■■■□□ 2.69
COMMD6-202ENST00000377612 ADAMTS12P58397 1594 aa31.8■■■□□ 2.68
COMMD6-202ENST00000377612 ARAP1Q96P48 1450 aa31.78■■■□□ 2.68
COMMD6-202ENST00000377612 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
COMMD6-202ENST00000377612 GRIN2AQ12879 1464 aa31.63■■■□□ 2.65
COMMD6-202ENST00000377612 CEP170Q5SW79 1584 aa31.61■■■□□ 2.65
COMMD6-202ENST00000377612 ERICH3Q5RHP9 1530 aa31.61■■■□□ 2.65
COMMD6-202ENST00000377612 CYB5RLQ6IPT4 315 aa31.53■■■□□ 2.64
COMMD6-202ENST00000377612 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
COMMD6-202ENST00000377612 NUP160Q12769 1436 aa31.5■■■□□ 2.63
COMMD6-202ENST00000377612 ERCC6L2Q5T890 1561 aa31.48■■■□□ 2.63
COMMD6-202ENST00000377612 SHROOM2Q13796 1616 aa31.48■■■□□ 2.63
COMMD6-202ENST00000377612 RUSC2Q8N2Y8 1516 aa31.36■■■□□ 2.61
COMMD6-202ENST00000377612 CUL7Q14999 1698 aa31.32■■■□□ 2.6
COMMD6-202ENST00000377612 KIF27Q86VH2 1401 aa31.23■■■□□ 2.59
COMMD6-202ENST00000377612 IGF1RP08069 1367 aa31.16■■■□□ 2.58
COMMD6-202ENST00000377612 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms