RNA–Protein interactions for RNA: ENST00000377360.8

KCNIP1-202, Transcript of potassium voltage-gated channel interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene KCNIP1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1-202ENST00000377360 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
KCNIP1-202ENST00000377360 ABCC9O60706 1549 aa25.43■■□□□ 1.66
KCNIP1-202ENST00000377360 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
KCNIP1-202ENST00000377360 RB1CC1Q8TDY2 1594 aa24.16■■□□□ 1.46
KCNIP1-202ENST00000377360 NACADO15069 1562 aa23.95■■□□□ 1.43
KCNIP1-202ENST00000377360 DCAF8L2P0C7V8 631 aa23.94■■□□□ 1.42
KCNIP1-202ENST00000377360 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
KCNIP1-202ENST00000377360 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
KCNIP1-202ENST00000377360 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
KCNIP1-202ENST00000377360 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
KCNIP1-202ENST00000377360 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
KCNIP1-202ENST00000377360 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
KCNIP1-202ENST00000377360 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
KCNIP1-202ENST00000377360 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
KCNIP1-202ENST00000377360 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
KCNIP1-202ENST00000377360 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
KCNIP1-202ENST00000377360 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
KCNIP1-202ENST00000377360 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
KCNIP1-202ENST00000377360 NCAPD3P42695 1498 aa22.11■■□□□ 1.13
KCNIP1-202ENST00000377360 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
KCNIP1-202ENST00000377360 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
KCNIP1-202ENST00000377360 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
KCNIP1-202ENST00000377360 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
KCNIP1-202ENST00000377360 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
KCNIP1-202ENST00000377360 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
KCNIP1-202ENST00000377360 CUX2O14529 1486 aa21.96■■□□□ 1.11
KCNIP1-202ENST00000377360 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
KCNIP1-202ENST00000377360 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
KCNIP1-202ENST00000377360 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
KCNIP1-202ENST00000377360 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
KCNIP1-202ENST00000377360 NESP48681 1621 aa21.79■■□□□ 1.08
KCNIP1-202ENST00000377360 WIZO95785 1651 aa21.66■■□□□ 1.06
KCNIP1-202ENST00000377360 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
KCNIP1-202ENST00000377360 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
KCNIP1-202ENST00000377360 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
KCNIP1-202ENST00000377360 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
KCNIP1-202ENST00000377360 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
KCNIP1-202ENST00000377360 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
KCNIP1-202ENST00000377360 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
KCNIP1-202ENST00000377360 MRC2Q9UBG0 1479 aa21.35■■□□□ 1.01
KCNIP1-202ENST00000377360 WDR62O43379 1518 aa21.27■■□□□ 1
KCNIP1-202ENST00000377360 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
KCNIP1-202ENST00000377360 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
KCNIP1-202ENST00000377360 CFTRP13569 1480 aa21.18■□□□□ 0.98
KCNIP1-202ENST00000377360 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
KCNIP1-202ENST00000377360 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
KCNIP1-202ENST00000377360 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
KCNIP1-202ENST00000377360 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
KCNIP1-202ENST00000377360 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
KCNIP1-202ENST00000377360 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
KCNIP1-202ENST00000377360 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
KCNIP1-202ENST00000377360 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
KCNIP1-202ENST00000377360 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
KCNIP1-202ENST00000377360 DNMBPQ6XZF7 1577 aa20.75■□□□□ 0.91
KCNIP1-202ENST00000377360 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
KCNIP1-202ENST00000377360 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
KCNIP1-202ENST00000377360 RIMBP3CA6NJZ7 1639 aa20.65■□□□□ 0.9
KCNIP1-202ENST00000377360 RIMBP3BA6NNM3 1639 aa20.65■□□□□ 0.9
KCNIP1-202ENST00000377360 RIMBP3Q9UFD9 1639 aa20.65■□□□□ 0.9
KCNIP1-202ENST00000377360 AQRO60306 1485 aaKnown RBP eCLIP20.61■□□□□ 0.89
KCNIP1-202ENST00000377360 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
KCNIP1-202ENST00000377360 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
KCNIP1-202ENST00000377360 FBLN2P98095 1184 aa20.58■□□□□ 0.89
KCNIP1-202ENST00000377360 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
KCNIP1-202ENST00000377360 CUX1P39880 1505 aa20.52■□□□□ 0.87
KCNIP1-202ENST00000377360 SOGA1O94964 1423 aa20.52■□□□□ 0.87
KCNIP1-202ENST00000377360 CYB5RLQ6IPT4 315 aa20.51■□□□□ 0.87
KCNIP1-202ENST00000377360 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
KCNIP1-202ENST00000377360 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
KCNIP1-202ENST00000377360 CHD1O14646 1710 aa20.49■□□□□ 0.87
KCNIP1-202ENST00000377360 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
KCNIP1-202ENST00000377360 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
KCNIP1-202ENST00000377360 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
KCNIP1-202ENST00000377360 CHMP7Q8WUX9 453 aaPredicted RBP20.4■□□□□ 0.86
KCNIP1-202ENST00000377360 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
KCNIP1-202ENST00000377360 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
KCNIP1-202ENST00000377360 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
KCNIP1-202ENST00000377360 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
KCNIP1-202ENST00000377360 PBRM1Q86U86 1689 aa20.33■□□□□ 0.85
KCNIP1-202ENST00000377360 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
KCNIP1-202ENST00000377360 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
KCNIP1-202ENST00000377360 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
KCNIP1-202ENST00000377360 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
KCNIP1-202ENST00000377360 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.83
KCNIP1-202ENST00000377360 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
KCNIP1-202ENST00000377360 ABCA10Q8WWZ4 1543 aa20.26■□□□□ 0.83
KCNIP1-202ENST00000377360 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
KCNIP1-202ENST00000377360 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
KCNIP1-202ENST00000377360 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
KCNIP1-202ENST00000377360 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
KCNIP1-202ENST00000377360 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
KCNIP1-202ENST00000377360 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
KCNIP1-202ENST00000377360 NUP160Q12769 1436 aa19.98■□□□□ 0.79
KCNIP1-202ENST00000377360 CEP170Q5SW79 1584 aa19.97■□□□□ 0.79
KCNIP1-202ENST00000377360 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
KCNIP1-202ENST00000377360 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
KCNIP1-202ENST00000377360 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
KCNIP1-202ENST00000377360 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
KCNIP1-202ENST00000377360 CUL7Q14999 1698 aa19.84■□□□□ 0.77
KCNIP1-202ENST00000377360 PRG4Q92954 1404 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms