RNA–Protein interactions for RNA: ENST00000376626.5

VSTM1-203, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM1, Length 922 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-203ENST00000376626 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
VSTM1-203ENST00000376626 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
VSTM1-203ENST00000376626 ABCC9O60706 1549 aa20.12■□□□□ 0.81
VSTM1-203ENST00000376626 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
VSTM1-203ENST00000376626 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
VSTM1-203ENST00000376626 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
VSTM1-203ENST00000376626 NACADO15069 1562 aa19.36■□□□□ 0.69
VSTM1-203ENST00000376626 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
VSTM1-203ENST00000376626 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
VSTM1-203ENST00000376626 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
VSTM1-203ENST00000376626 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
VSTM1-203ENST00000376626 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
VSTM1-203ENST00000376626 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
VSTM1-203ENST00000376626 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
VSTM1-203ENST00000376626 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
VSTM1-203ENST00000376626 SHROOM4Q9ULL8 1493 aa18.54■□□□□ 0.56
VSTM1-203ENST00000376626 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
VSTM1-203ENST00000376626 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
VSTM1-203ENST00000376626 CC2D2AQ9P2K1 1620 aa18.19■□□□□ 0.5
VSTM1-203ENST00000376626 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
VSTM1-203ENST00000376626 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
VSTM1-203ENST00000376626 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
VSTM1-203ENST00000376626 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
VSTM1-203ENST00000376626 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
VSTM1-203ENST00000376626 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
VSTM1-203ENST00000376626 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
VSTM1-203ENST00000376626 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
VSTM1-203ENST00000376626 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
VSTM1-203ENST00000376626 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
VSTM1-203ENST00000376626 WIZO95785 1651 aa17.74■□□□□ 0.43
VSTM1-203ENST00000376626 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
VSTM1-203ENST00000376626 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
VSTM1-203ENST00000376626 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
VSTM1-203ENST00000376626 NESP48681 1621 aa17.42■□□□□ 0.38
VSTM1-203ENST00000376626 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
VSTM1-203ENST00000376626 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
VSTM1-203ENST00000376626 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
VSTM1-203ENST00000376626 CCDC88BA6NC98 1476 aa17.32■□□□□ 0.36
VSTM1-203ENST00000376626 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
VSTM1-203ENST00000376626 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
VSTM1-203ENST00000376626 CFTRP13569 1480 aa17.23■□□□□ 0.35
VSTM1-203ENST00000376626 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
VSTM1-203ENST00000376626 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
VSTM1-203ENST00000376626 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
VSTM1-203ENST00000376626 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
VSTM1-203ENST00000376626 CUX2O14529 1486 aa17.1■□□□□ 0.33
VSTM1-203ENST00000376626 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
VSTM1-203ENST00000376626 WDR62O43379 1518 aa17.01■□□□□ 0.31
VSTM1-203ENST00000376626 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
VSTM1-203ENST00000376626 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
VSTM1-203ENST00000376626 ABCC8Q09428 1581 aa16.89■□□□□ 0.3
VSTM1-203ENST00000376626 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
VSTM1-203ENST00000376626 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
VSTM1-203ENST00000376626 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
VSTM1-203ENST00000376626 CUX1P39880 1505 aa16.79■□□□□ 0.28
VSTM1-203ENST00000376626 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
VSTM1-203ENST00000376626 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
VSTM1-203ENST00000376626 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
VSTM1-203ENST00000376626 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
VSTM1-203ENST00000376626 SOGA1O94964 1423 aa16.7■□□□□ 0.26
VSTM1-203ENST00000376626 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
VSTM1-203ENST00000376626 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
VSTM1-203ENST00000376626 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
VSTM1-203ENST00000376626 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
VSTM1-203ENST00000376626 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
VSTM1-203ENST00000376626 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
VSTM1-203ENST00000376626 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
VSTM1-203ENST00000376626 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
VSTM1-203ENST00000376626 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
VSTM1-203ENST00000376626 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
VSTM1-203ENST00000376626 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
VSTM1-203ENST00000376626 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
VSTM1-203ENST00000376626 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
VSTM1-203ENST00000376626 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
VSTM1-203ENST00000376626 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
VSTM1-203ENST00000376626 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
VSTM1-203ENST00000376626 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
VSTM1-203ENST00000376626 FBLN2P98095 1184 aa16.46■□□□□ 0.23
VSTM1-203ENST00000376626 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
VSTM1-203ENST00000376626 CHD1O14646 1710 aa16.44■□□□□ 0.22
VSTM1-203ENST00000376626 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
VSTM1-203ENST00000376626 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
VSTM1-203ENST00000376626 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
VSTM1-203ENST00000376626 KIF27Q86VH2 1401 aa16.38■□□□□ 0.21
VSTM1-203ENST00000376626 SYNJ2O15056 1496 aa16.36■□□□□ 0.21
VSTM1-203ENST00000376626 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
VSTM1-203ENST00000376626 ADAMTS12P58397 1594 aa16.33■□□□□ 0.2
VSTM1-203ENST00000376626 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
VSTM1-203ENST00000376626 GRIN2AQ12879 1464 aa16.27■□□□□ 0.19
VSTM1-203ENST00000376626 CUL7Q14999 1698 aa16.26■□□□□ 0.19
VSTM1-203ENST00000376626 IGF1RP08069 1367 aa16.26■□□□□ 0.19
VSTM1-203ENST00000376626 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
VSTM1-203ENST00000376626 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
VSTM1-203ENST00000376626 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
VSTM1-203ENST00000376626 CEP170Q5SW79 1584 aa16.18■□□□□ 0.18
VSTM1-203ENST00000376626 NUP160Q12769 1436 aa16.17■□□□□ 0.18
VSTM1-203ENST00000376626 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
VSTM1-203ENST00000376626 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
VSTM1-203ENST00000376626 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
VSTM1-203ENST00000376626 ARHGEF11O15085 1522 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms