RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
CLCN6-203ENST00000376490 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
CLCN6-203ENST00000376490 ABCC9O60706 1549 aa30.73■■■□□ 2.51
CLCN6-203ENST00000376490 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
CLCN6-203ENST00000376490 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
CLCN6-203ENST00000376490 NACADO15069 1562 aa29.34■■■□□ 2.29
CLCN6-203ENST00000376490 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
CLCN6-203ENST00000376490 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
CLCN6-203ENST00000376490 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
CLCN6-203ENST00000376490 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
CLCN6-203ENST00000376490 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
CLCN6-203ENST00000376490 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
CLCN6-203ENST00000376490 DNAJC5BQ9UF47 199 aa28.46■■■□□ 2.15
CLCN6-203ENST00000376490 SCRIBQ14160 1630 aa28.46■■■□□ 2.15
CLCN6-203ENST00000376490 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
CLCN6-203ENST00000376490 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
CLCN6-203ENST00000376490 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
CLCN6-203ENST00000376490 CECR2Q9BXF3 1484 aa27.6■■■□□ 2.01
CLCN6-203ENST00000376490 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
CLCN6-203ENST00000376490 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
CLCN6-203ENST00000376490 NCAPD3P42695 1498 aa27.07■■□□□ 1.92
CLCN6-203ENST00000376490 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
CLCN6-203ENST00000376490 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
CLCN6-203ENST00000376490 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
CLCN6-203ENST00000376490 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
CLCN6-203ENST00000376490 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
CLCN6-203ENST00000376490 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
CLCN6-203ENST00000376490 WIZO95785 1651 aa26.73■■□□□ 1.87
CLCN6-203ENST00000376490 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
CLCN6-203ENST00000376490 NESP48681 1621 aa26.56■■□□□ 1.84
CLCN6-203ENST00000376490 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
CLCN6-203ENST00000376490 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
CLCN6-203ENST00000376490 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
CLCN6-203ENST00000376490 CADPSQ9ULU8 1353 aa26.28■■□□□ 1.8
CLCN6-203ENST00000376490 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
CLCN6-203ENST00000376490 CUX2O14529 1486 aa26.22■■□□□ 1.79
CLCN6-203ENST00000376490 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
CLCN6-203ENST00000376490 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
CLCN6-203ENST00000376490 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
CLCN6-203ENST00000376490 CFTRP13569 1480 aa26.07■■□□□ 1.76
CLCN6-203ENST00000376490 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
CLCN6-203ENST00000376490 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
CLCN6-203ENST00000376490 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
CLCN6-203ENST00000376490 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.74
CLCN6-203ENST00000376490 WDR62O43379 1518 aa25.88■■□□□ 1.73
CLCN6-203ENST00000376490 SUPT5HO00267 1087 aaKnown RBP25.83■■□□□ 1.73
CLCN6-203ENST00000376490 URB2Q14146 1524 aaKnown RBP25.76■■□□□ 1.71
CLCN6-203ENST00000376490 DNAJC5Q9H3Z4 198 aa25.74■■□□□ 1.71
CLCN6-203ENST00000376490 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
CLCN6-203ENST00000376490 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
CLCN6-203ENST00000376490 DNMBPQ6XZF7 1577 aa25.49■■□□□ 1.67
CLCN6-203ENST00000376490 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
CLCN6-203ENST00000376490 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
CLCN6-203ENST00000376490 POLA1P09884 1462 aaPredicted RBP25.32■■□□□ 1.64
CLCN6-203ENST00000376490 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
CLCN6-203ENST00000376490 CUX1P39880 1505 aa25.3■■□□□ 1.64
CLCN6-203ENST00000376490 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
CLCN6-203ENST00000376490 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
CLCN6-203ENST00000376490 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
CLCN6-203ENST00000376490 SOGA1O94964 1423 aa25.23■■□□□ 1.63
CLCN6-203ENST00000376490 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.636e-7■■■■■ 32.8
CLCN6-203ENST00000376490 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
CLCN6-203ENST00000376490 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
CLCN6-203ENST00000376490 WDR97A6NE52 1622 aa25.06■■□□□ 1.6
CLCN6-203ENST00000376490 CHD1O14646 1710 aa25.04■■□□□ 1.6
CLCN6-203ENST00000376490 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
CLCN6-203ENST00000376490 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.65e-6■■■■■ 46
CLCN6-203ENST00000376490 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
CLCN6-203ENST00000376490 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
CLCN6-203ENST00000376490 FBLN2P98095 1184 aa24.98■■□□□ 1.59
CLCN6-203ENST00000376490 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
CLCN6-203ENST00000376490 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
CLCN6-203ENST00000376490 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
CLCN6-203ENST00000376490 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
CLCN6-203ENST00000376490 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
CLCN6-203ENST00000376490 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
CLCN6-203ENST00000376490 MAGI1Q96QZ7 1491 aaPredicted RBP24.87■■□□□ 1.57
CLCN6-203ENST00000376490 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
CLCN6-203ENST00000376490 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
CLCN6-203ENST00000376490 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
CLCN6-203ENST00000376490 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
CLCN6-203ENST00000376490 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
CLCN6-203ENST00000376490 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
CLCN6-203ENST00000376490 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
CLCN6-203ENST00000376490 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
CLCN6-203ENST00000376490 ADAMTS12P58397 1594 aa24.66■■□□□ 1.54
CLCN6-203ENST00000376490 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
CLCN6-203ENST00000376490 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
CLCN6-203ENST00000376490 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
CLCN6-203ENST00000376490 CYB5RLQ6IPT4 315 aa24.58■■□□□ 1.53
CLCN6-203ENST00000376490 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
CLCN6-203ENST00000376490 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
CLCN6-203ENST00000376490 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
CLCN6-203ENST00000376490 NUP160Q12769 1436 aa24.5■■□□□ 1.51
CLCN6-203ENST00000376490 IGF1RP08069 1367 aa24.49■■□□□ 1.51
CLCN6-203ENST00000376490 CUL7Q14999 1698 aa24.41■■□□□ 1.5
CLCN6-203ENST00000376490 ERCC6L2Q5T890 1561 aa24.38■■□□□ 1.49
CLCN6-203ENST00000376490 SHROOM2Q13796 1616 aa24.37■■□□□ 1.49
CLCN6-203ENST00000376490 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
CLCN6-203ENST00000376490 CARMIL1Q5VZK9 1371 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms