RNA–Protein interactions for RNA: ENST00000376384.9

PAAF1-202, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5 BASIC

Gene PAAF1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-202ENST00000376384 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
PAAF1-202ENST00000376384 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.19
PAAF1-202ENST00000376384 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
PAAF1-202ENST00000376384 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
PAAF1-202ENST00000376384 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
PAAF1-202ENST00000376384 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
PAAF1-202ENST00000376384 ABCC9O60706 1549 aa15.37■□□□□ 0.05
PAAF1-202ENST00000376384 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
PAAF1-202ENST00000376384 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
PAAF1-202ENST00000376384 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
PAAF1-202ENST00000376384 NACADO15069 1562 aa15.13■□□□□ 0.01
PAAF1-202ENST00000376384 RB1CC1Q8TDY2 1594 aa15.02□□□□□ -0.01
PAAF1-202ENST00000376384 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
PAAF1-202ENST00000376384 SUPT5HO00267 1087 aaKnown RBP14.8□□□□□ -0.04
PAAF1-202ENST00000376384 UNC13AQ9UPW8 1703 aa14.76□□□□□ -0.05
PAAF1-202ENST00000376384 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
PAAF1-202ENST00000376384 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
PAAF1-202ENST00000376384 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.1
PAAF1-202ENST00000376384 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
PAAF1-202ENST00000376384 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
PAAF1-202ENST00000376384 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
PAAF1-202ENST00000376384 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
PAAF1-202ENST00000376384 WIZO95785 1651 aa14.33□□□□□ -0.12
PAAF1-202ENST00000376384 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
PAAF1-202ENST00000376384 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
PAAF1-202ENST00000376384 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
PAAF1-202ENST00000376384 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
PAAF1-202ENST00000376384 SMARCA2P51531 1590 aa14.07□□□□□ -0.16
PAAF1-202ENST00000376384 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
PAAF1-202ENST00000376384 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
PAAF1-202ENST00000376384 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
PAAF1-202ENST00000376384 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
PAAF1-202ENST00000376384 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
PAAF1-202ENST00000376384 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
PAAF1-202ENST00000376384 NCAPD3P42695 1498 aa13.92□□□□□ -0.18
PAAF1-202ENST00000376384 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
PAAF1-202ENST00000376384 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
PAAF1-202ENST00000376384 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
PAAF1-202ENST00000376384 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
PAAF1-202ENST00000376384 FAM9AQ8IZU1 332 aaPredicted RBP13.64□□□□□ -0.23
PAAF1-202ENST00000376384 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
PAAF1-202ENST00000376384 EEA1Q15075 1411 aa13.62□□□□□ -0.23
PAAF1-202ENST00000376384 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
PAAF1-202ENST00000376384 CFTRP13569 1480 aa13.62□□□□□ -0.23
PAAF1-202ENST00000376384 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
PAAF1-202ENST00000376384 TOP2BQ02880 1626 aa13.58□□□□□ -0.24
PAAF1-202ENST00000376384 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
PAAF1-202ENST00000376384 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
PAAF1-202ENST00000376384 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
PAAF1-202ENST00000376384 SOGA1O94964 1423 aa13.52□□□□□ -0.25
PAAF1-202ENST00000376384 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
PAAF1-202ENST00000376384 NESP48681 1621 aa13.48□□□□□ -0.25
PAAF1-202ENST00000376384 KIF21BO75037 1637 aa13.47□□□□□ -0.25
PAAF1-202ENST00000376384 CUX1P39880 1505 aa13.45□□□□□ -0.26
PAAF1-202ENST00000376384 GOLGA3Q08378 1498 aa13.44□□□□□ -0.26
PAAF1-202ENST00000376384 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
PAAF1-202ENST00000376384 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
PAAF1-202ENST00000376384 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
PAAF1-202ENST00000376384 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
PAAF1-202ENST00000376384 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
PAAF1-202ENST00000376384 KIF21AQ7Z4S6 1674 aa13.38□□□□□ -0.27
PAAF1-202ENST00000376384 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
PAAF1-202ENST00000376384 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
PAAF1-202ENST00000376384 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
PAAF1-202ENST00000376384 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.27
PAAF1-202ENST00000376384 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
PAAF1-202ENST00000376384 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
PAAF1-202ENST00000376384 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
PAAF1-202ENST00000376384 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
PAAF1-202ENST00000376384 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
PAAF1-202ENST00000376384 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
PAAF1-202ENST00000376384 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
PAAF1-202ENST00000376384 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
PAAF1-202ENST00000376384 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
PAAF1-202ENST00000376384 CUX2O14529 1486 aa13.23□□□□□ -0.29
PAAF1-202ENST00000376384 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
PAAF1-202ENST00000376384 MRC2Q9UBG0 1479 aa13.22□□□□□ -0.29
PAAF1-202ENST00000376384 ERCC6Q03468 1493 aa13.2□□□□□ -0.3
PAAF1-202ENST00000376384 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
PAAF1-202ENST00000376384 CLIP1P30622 1438 aa13.2□□□□□ -0.3
PAAF1-202ENST00000376384 RAD54L2Q9Y4B4 1467 aa13.17□□□□□ -0.3
PAAF1-202ENST00000376384 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
PAAF1-202ENST00000376384 KCNA4P22459 653 aa13.16□□□□□ -0.3
PAAF1-202ENST00000376384 WDR62O43379 1518 aa13.16□□□□□ -0.3
PAAF1-202ENST00000376384 CUL7Q14999 1698 aa13.15□□□□□ -0.3
PAAF1-202ENST00000376384 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
PAAF1-202ENST00000376384 HRCP23327 699 aa13.13□□□□□ -0.31
PAAF1-202ENST00000376384 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
PAAF1-202ENST00000376384 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
PAAF1-202ENST00000376384 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
PAAF1-202ENST00000376384 ABCA5Q8WWZ7 1642 aa13.09□□□□□ -0.31
PAAF1-202ENST00000376384 IGF1RP08069 1367 aa13.09□□□□□ -0.31
PAAF1-202ENST00000376384 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.31
PAAF1-202ENST00000376384 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.32
PAAF1-202ENST00000376384 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
PAAF1-202ENST00000376384 PBRM1Q86U86 1689 aa13.04□□□□□ -0.32
PAAF1-202ENST00000376384 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
PAAF1-202ENST00000376384 IFT140Q96RY7 1462 aa13.04□□□□□ -0.32
PAAF1-202ENST00000376384 TDRD9Q8NDG6 1382 aaKnown RBP13.03□□□□□ -0.32
PAAF1-202ENST00000376384 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms