RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
CHRDL2-202ENST00000376324 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
CHRDL2-202ENST00000376324 ABCC9O60706 1549 aa29.02■■■□□ 2.24
CHRDL2-202ENST00000376324 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
CHRDL2-202ENST00000376324 DCAF8L2P0C7V8 631 aa28.66■■■□□ 2.18
CHRDL2-202ENST00000376324 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
CHRDL2-202ENST00000376324 NACADO15069 1562 aa28.22■■■□□ 2.11
CHRDL2-202ENST00000376324 MYO15BQ96JP2 1530 aa28.19■■■□□ 2.1
CHRDL2-202ENST00000376324 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
CHRDL2-202ENST00000376324 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
CHRDL2-202ENST00000376324 SCRIBQ14160 1630 aa27.76■■■□□ 2.03
CHRDL2-202ENST00000376324 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
CHRDL2-202ENST00000376324 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
CHRDL2-202ENST00000376324 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
CHRDL2-202ENST00000376324 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
CHRDL2-202ENST00000376324 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
CHRDL2-202ENST00000376324 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
CHRDL2-202ENST00000376324 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
CHRDL2-202ENST00000376324 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
CHRDL2-202ENST00000376324 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
CHRDL2-202ENST00000376324 EIF4G1Q04637 1599 aaKnown RBP26.48■■□□□ 1.83
CHRDL2-202ENST00000376324 WIZO95785 1651 aa26.34■■□□□ 1.81
CHRDL2-202ENST00000376324 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
CHRDL2-202ENST00000376324 ATAD2BQ9ULI0 1458 aa26.2■■□□□ 1.78
CHRDL2-202ENST00000376324 SMARCA2P51531 1590 aa26.18■■□□□ 1.78
CHRDL2-202ENST00000376324 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
CHRDL2-202ENST00000376324 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
CHRDL2-202ENST00000376324 NCAPD3P42695 1498 aa26.03■■□□□ 1.76
CHRDL2-202ENST00000376324 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
CHRDL2-202ENST00000376324 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
CHRDL2-202ENST00000376324 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
CHRDL2-202ENST00000376324 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
CHRDL2-202ENST00000376324 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
CHRDL2-202ENST00000376324 CFTRP13569 1480 aa25.33■■□□□ 1.65
CHRDL2-202ENST00000376324 NESP48681 1621 aa25.32■■□□□ 1.64
CHRDL2-202ENST00000376324 LAMC3Q9Y6N6 1575 aa25.24■■□□□ 1.63
CHRDL2-202ENST00000376324 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
CHRDL2-202ENST00000376324 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
CHRDL2-202ENST00000376324 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
CHRDL2-202ENST00000376324 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
CHRDL2-202ENST00000376324 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
CHRDL2-202ENST00000376324 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
CHRDL2-202ENST00000376324 CEP164Q9UPV0 1460 aa24.98■■□□□ 1.59
CHRDL2-202ENST00000376324 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
CHRDL2-202ENST00000376324 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
CHRDL2-202ENST00000376324 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
CHRDL2-202ENST00000376324 SYNJ1O43426 1573 aa24.89■■□□□ 1.58
CHRDL2-202ENST00000376324 CUX1P39880 1505 aa24.86■■□□□ 1.57
CHRDL2-202ENST00000376324 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
CHRDL2-202ENST00000376324 TOP2BQ02880 1626 aa24.8■■□□□ 1.56
CHRDL2-202ENST00000376324 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
CHRDL2-202ENST00000376324 MRC2Q9UBG0 1479 aa24.79■■□□□ 1.56
CHRDL2-202ENST00000376324 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
CHRDL2-202ENST00000376324 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
CHRDL2-202ENST00000376324 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
CHRDL2-202ENST00000376324 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
CHRDL2-202ENST00000376324 WDR62O43379 1518 aa24.65■■□□□ 1.54
CHRDL2-202ENST00000376324 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
CHRDL2-202ENST00000376324 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
CHRDL2-202ENST00000376324 RAD54L2Q9Y4B4 1467 aa24.56■■□□□ 1.52
CHRDL2-202ENST00000376324 SOGA1O94964 1423 aa24.54■■□□□ 1.52
CHRDL2-202ENST00000376324 CUX2O14529 1486 aa24.48■■□□□ 1.51
CHRDL2-202ENST00000376324 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
CHRDL2-202ENST00000376324 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
CHRDL2-202ENST00000376324 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
CHRDL2-202ENST00000376324 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
CHRDL2-202ENST00000376324 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
CHRDL2-202ENST00000376324 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
CHRDL2-202ENST00000376324 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
CHRDL2-202ENST00000376324 EEA1Q15075 1411 aa24.34■■□□□ 1.49
CHRDL2-202ENST00000376324 ZNF608Q9ULD9 1512 aaPredicted RBP24.31■■□□□ 1.48
CHRDL2-202ENST00000376324 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
CHRDL2-202ENST00000376324 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.48
CHRDL2-202ENST00000376324 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
CHRDL2-202ENST00000376324 ABCA5Q8WWZ7 1642 aa24.26■■□□□ 1.47
CHRDL2-202ENST00000376324 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
CHRDL2-202ENST00000376324 EIF4G3O43432 1585 aaKnown RBP24.21■■□□□ 1.47
CHRDL2-202ENST00000376324 IGF1RP08069 1367 aa24.2■■□□□ 1.46
CHRDL2-202ENST00000376324 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
CHRDL2-202ENST00000376324 PBRM1Q86U86 1689 aa24.17■■□□□ 1.46
CHRDL2-202ENST00000376324 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
CHRDL2-202ENST00000376324 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
CHRDL2-202ENST00000376324 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
CHRDL2-202ENST00000376324 PRXQ9BXM0 1461 aa24.07■■□□□ 1.44
CHRDL2-202ENST00000376324 KIF21BO75037 1637 aa24.06■■□□□ 1.44
CHRDL2-202ENST00000376324 CUL7Q14999 1698 aa24.06■■□□□ 1.44
CHRDL2-202ENST00000376324 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
CHRDL2-202ENST00000376324 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
CHRDL2-202ENST00000376324 GOLGA3Q08378 1498 aa24.02■■□□□ 1.44
CHRDL2-202ENST00000376324 UBTFP17480 764 aaKnown RBP24■■□□□ 1.43
CHRDL2-202ENST00000376324 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
CHRDL2-202ENST00000376324 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
CHRDL2-202ENST00000376324 MAGI1Q96QZ7 1491 aaPredicted RBP23.96■■□□□ 1.43
CHRDL2-202ENST00000376324 FBLN2P98095 1184 aa23.93■■□□□ 1.42
CHRDL2-202ENST00000376324 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
CHRDL2-202ENST00000376324 SYNJ2O15056 1496 aa23.88■■□□□ 1.41
CHRDL2-202ENST00000376324 TNIKQ9UKE5 1360 aa23.84■■□□□ 1.41
CHRDL2-202ENST00000376324 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
CHRDL2-202ENST00000376324 RANGAP1P46060 587 aaPredicted RBP23.81■■□□□ 1.4
CHRDL2-202ENST00000376324 CHD1O14646 1710 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms