RNA–Protein interactions for RNA: ENST00000375958.3

ERCC5-203, Transcript of ERCC excision repair 5, endonuclease, humanhuman

TSL 2

Gene ERCC5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC5-203ENST00000375958 NISCHQ9Y2I1 1504 aa45.7■■■■■ 4.91
ERCC5-203ENST00000375958 CCDC180Q9P1Z9 1646 aa40.61■■■■■ 4.09
ERCC5-203ENST00000375958 ABCC9O60706 1549 aa39.88■■■■□ 3.97
ERCC5-203ENST00000375958 RB1CC1Q8TDY2 1594 aa38.29■■■■□ 3.72
ERCC5-203ENST00000375958 DCAF8L2P0C7V8 631 aa38.28■■■■□ 3.72
ERCC5-203ENST00000375958 NACADO15069 1562 aa38.23■■■■□ 3.71
ERCC5-203ENST00000375958 ZCCHC6Q5VYS8 1495 aaKnown RBP38.05■■■■□ 3.68
ERCC5-203ENST00000375958 MYO15BQ96JP2 1530 aa37.96■■■■□ 3.67
ERCC5-203ENST00000375958 DCAF1Q9Y4B6 1507 aa37.78■■■■□ 3.64
ERCC5-203ENST00000375958 UNC13AQ9UPW8 1703 aa37.37■■■■□ 3.57
ERCC5-203ENST00000375958 PABPN1Q86U42 306 aaKnown RBP eCLIP37.29■■■■□ 3.56
ERCC5-203ENST00000375958 BICRAQ9NZM4 1560 aa37.13■■■■□ 3.53
ERCC5-203ENST00000375958 SCRIBQ14160 1630 aa37.11■■■■□ 3.53
ERCC5-203ENST00000375958 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
ERCC5-203ENST00000375958 DNAJC5BQ9UF47 199 aa36.66■■■■□ 3.46
ERCC5-203ENST00000375958 EIF4G1Q04637 1599 aaKnown RBP36.16■■■■□ 3.38
ERCC5-203ENST00000375958 CC2D2AQ9P2K1 1620 aa36.03■■■■□ 3.36
ERCC5-203ENST00000375958 CECR2Q9BXF3 1484 aa35.83■■■■□ 3.33
ERCC5-203ENST00000375958 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
ERCC5-203ENST00000375958 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
ERCC5-203ENST00000375958 ATAD2BQ9ULI0 1458 aa35.3■■■■□ 3.24
ERCC5-203ENST00000375958 NCAPD3P42695 1498 aa35.29■■■■□ 3.24
ERCC5-203ENST00000375958 SMARCA2P51531 1590 aa35.25■■■■□ 3.23
ERCC5-203ENST00000375958 MROH2BQ7Z745 1585 aa35.23■■■■□ 3.23
ERCC5-203ENST00000375958 PEG3Q9GZU2 1588 aa35.1■■■■□ 3.21
ERCC5-203ENST00000375958 HMGXB3Q12766 1538 aa35.1■■■■□ 3.21
ERCC5-203ENST00000375958 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
ERCC5-203ENST00000375958 WIZO95785 1651 aa34.83■■■■□ 3.17
ERCC5-203ENST00000375958 RSF1Q96T23 1441 aaPredicted RBP34.82■■■■□ 3.17
ERCC5-203ENST00000375958 NESP48681 1621 aa34.48■■■■□ 3.11
ERCC5-203ENST00000375958 TOP2AP11388 1531 aaKnown RBP34.47■■■■□ 3.11
ERCC5-203ENST00000375958 ERCC6Q03468 1493 aa34.39■■■■□ 3.1
ERCC5-203ENST00000375958 LAMC3Q9Y6N6 1575 aa34.34■■■■□ 3.09
ERCC5-203ENST00000375958 CADPSQ9ULU8 1353 aa34.27■■■■□ 3.08
ERCC5-203ENST00000375958 PDS5BQ9NTI5 1447 aa34.15■■■■□ 3.06
ERCC5-203ENST00000375958 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.05
ERCC5-203ENST00000375958 CFTRP13569 1480 aa34.05■■■■□ 3.04
ERCC5-203ENST00000375958 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
ERCC5-203ENST00000375958 CUX2O14529 1486 aa34■■■■□ 3.03
ERCC5-203ENST00000375958 SUPT5HO00267 1087 aaKnown RBP33.95■■■■□ 3.03
ERCC5-203ENST00000375958 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
ERCC5-203ENST00000375958 FANCD2Q9BXW9 1451 aa33.88■■■■□ 3.01
ERCC5-203ENST00000375958 CEP164Q9UPV0 1460 aa33.84■■■■□ 3.01
ERCC5-203ENST00000375958 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
ERCC5-203ENST00000375958 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
ERCC5-203ENST00000375958 WDR62O43379 1518 aa33.68■■■□□ 2.98
ERCC5-203ENST00000375958 URB2Q14146 1524 aaKnown RBP33.55■■■□□ 2.96
ERCC5-203ENST00000375958 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
ERCC5-203ENST00000375958 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
ERCC5-203ENST00000375958 DNMBPQ6XZF7 1577 aa33.27■■■□□ 2.92
ERCC5-203ENST00000375958 IFT140Q96RY7 1462 aa33.13■■■□□ 2.89
ERCC5-203ENST00000375958 CUX1P39880 1505 aa33.06■■■□□ 2.88
ERCC5-203ENST00000375958 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
ERCC5-203ENST00000375958 POLA1P09884 1462 aaPredicted RBP33.05■■■□□ 2.88
ERCC5-203ENST00000375958 ZNF608Q9ULD9 1512 aaPredicted RBP33.01■■■□□ 2.87
ERCC5-203ENST00000375958 FGD5Q6ZNL6 1462 aa32.96■■■□□ 2.87
ERCC5-203ENST00000375958 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.86
ERCC5-203ENST00000375958 SOGA1O94964 1423 aa32.92■■■□□ 2.86
ERCC5-203ENST00000375958 RAD54L2Q9Y4B4 1467 aa32.92■■■□□ 2.86
ERCC5-203ENST00000375958 EIF4G3O43432 1585 aaKnown RBP32.85■■■□□ 2.85
ERCC5-203ENST00000375958 WRNQ14191 1432 aaPredicted RBP eCLIP32.84■■■□□ 2.85
ERCC5-203ENST00000375958 AQRO60306 1485 aaKnown RBP eCLIP32.82■■■□□ 2.84
ERCC5-203ENST00000375958 TDRD9Q8NDG6 1382 aaKnown RBP32.76■■■□□ 2.83
ERCC5-203ENST00000375958 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
ERCC5-203ENST00000375958 TOP2BQ02880 1626 aa32.74■■■□□ 2.83
ERCC5-203ENST00000375958 BIVM-ERCC5R4GMW8 1640 aa32.72■■■□□ 2.83
ERCC5-203ENST00000375958 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
ERCC5-203ENST00000375958 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
ERCC5-203ENST00000375958 OSCARQ8IYS5 282 aa32.62■■■□□ 2.81
ERCC5-203ENST00000375958 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
ERCC5-203ENST00000375958 GAPVD1Q14C86 1478 aa32.53■■■□□ 2.8
ERCC5-203ENST00000375958 SNAPC4Q5SXM2 1469 aa32.5■■■□□ 2.79
ERCC5-203ENST00000375958 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
ERCC5-203ENST00000375958 FBLN2P98095 1184 aa32.47■■■□□ 2.79
ERCC5-203ENST00000375958 MAGI1Q96QZ7 1491 aaPredicted RBP32.44■■■□□ 2.78
ERCC5-203ENST00000375958 CHD1O14646 1710 aa32.43■■■□□ 2.78
ERCC5-203ENST00000375958 PBRM1Q86U86 1689 aa32.42■■■□□ 2.78
ERCC5-203ENST00000375958 CHMP7Q8WUX9 453 aaPredicted RBP32.35■■■□□ 2.77
ERCC5-203ENST00000375958 SYNJ2O15056 1496 aa32.33■■■□□ 2.77
ERCC5-203ENST00000375958 ERICH3Q5RHP9 1530 aa32.22■■■□□ 2.75
ERCC5-203ENST00000375958 ADAMTS12P58397 1594 aa32.19■■■□□ 2.74
ERCC5-203ENST00000375958 FHAD1B1AJZ9 1412 aa32.15■■■□□ 2.74
ERCC5-203ENST00000375958 KIF27Q86VH2 1401 aa32.15■■■□□ 2.74
ERCC5-203ENST00000375958 GRIN2AQ12879 1464 aa32.11■■■□□ 2.73
ERCC5-203ENST00000375958 CLASP1Q7Z460 1538 aa32.09■■■□□ 2.73
ERCC5-203ENST00000375958 ARHGEF11O15085 1522 aa32.07■■■□□ 2.72
ERCC5-203ENST00000375958 RIMBP3CA6NJZ7 1639 aa32.07■■■□□ 2.72
ERCC5-203ENST00000375958 RIMBP3BA6NNM3 1639 aa32.07■■■□□ 2.72
ERCC5-203ENST00000375958 RIMBP3Q9UFD9 1639 aa32.07■■■□□ 2.72
ERCC5-203ENST00000375958 TRIM41Q8WV44 630 aa32.04■■■□□ 2.72
ERCC5-203ENST00000375958 IGF1RP08069 1367 aa32.04■■■□□ 2.72
ERCC5-203ENST00000375958 NUP160Q12769 1436 aa31.96■■■□□ 2.71
ERCC5-203ENST00000375958 CEP170Q5SW79 1584 aa31.95■■■□□ 2.71
ERCC5-203ENST00000375958 CUL7Q14999 1698 aa31.91■■■□□ 2.7
ERCC5-203ENST00000375958 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
ERCC5-203ENST00000375958 CARMIL1Q5VZK9 1371 aa31.84■■■□□ 2.69
ERCC5-203ENST00000375958 CYB5RLQ6IPT4 315 aa31.82■■■□□ 2.68
ERCC5-203ENST00000375958 ARAP1Q96P48 1450 aa31.81■■■□□ 2.68
ERCC5-203ENST00000375958 SHROOM2Q13796 1616 aa31.71■■■□□ 2.67
ERCC5-203ENST00000375958 ERCC6L2Q5T890 1561 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms