RNA–Protein interactions for RNA: ENST00000375831.1

SHC3-201, Transcript of SHC adaptor protein 3, humanhuman

TSL 2 BASIC

Gene SHC3, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-201ENST00000375831 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
SHC3-201ENST00000375831 ABCC9O60706 1549 aa24.24■■□□□ 1.47
SHC3-201ENST00000375831 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
SHC3-201ENST00000375831 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
SHC3-201ENST00000375831 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
SHC3-201ENST00000375831 NACADO15069 1562 aa22.66■■□□□ 1.22
SHC3-201ENST00000375831 PABPN1Q86U42 306 aaKnown RBP eCLIP22.51■■□□□ 1.19
SHC3-201ENST00000375831 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
SHC3-201ENST00000375831 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
SHC3-201ENST00000375831 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
SHC3-201ENST00000375831 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
SHC3-201ENST00000375831 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
SHC3-201ENST00000375831 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
SHC3-201ENST00000375831 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
SHC3-201ENST00000375831 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
SHC3-201ENST00000375831 CECR2Q9BXF3 1484 aa21.88■■□□□ 1.09
SHC3-201ENST00000375831 EIF4G1Q04637 1599 aaKnown RBP21.77■■□□□ 1.08
SHC3-201ENST00000375831 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
SHC3-201ENST00000375831 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
SHC3-201ENST00000375831 CUX2O14529 1486 aa21.06■□□□□ 0.96
SHC3-201ENST00000375831 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
SHC3-201ENST00000375831 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
SHC3-201ENST00000375831 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
SHC3-201ENST00000375831 NESP48681 1621 aa20.78■□□□□ 0.92
SHC3-201ENST00000375831 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
SHC3-201ENST00000375831 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
SHC3-201ENST00000375831 SMARCA2P51531 1590 aa20.7■□□□□ 0.9
SHC3-201ENST00000375831 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
SHC3-201ENST00000375831 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.88
SHC3-201ENST00000375831 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
SHC3-201ENST00000375831 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
SHC3-201ENST00000375831 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
SHC3-201ENST00000375831 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
SHC3-201ENST00000375831 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
SHC3-201ENST00000375831 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
SHC3-201ENST00000375831 CADPSQ9ULU8 1353 aa20.3■□□□□ 0.84
SHC3-201ENST00000375831 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
SHC3-201ENST00000375831 WDR62O43379 1518 aa20.26■□□□□ 0.83
SHC3-201ENST00000375831 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
SHC3-201ENST00000375831 WIZO95785 1651 aa20.1■□□□□ 0.81
SHC3-201ENST00000375831 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
SHC3-201ENST00000375831 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
SHC3-201ENST00000375831 CFTRP13569 1480 aa20.02■□□□□ 0.8
SHC3-201ENST00000375831 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
SHC3-201ENST00000375831 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
SHC3-201ENST00000375831 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
SHC3-201ENST00000375831 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
SHC3-201ENST00000375831 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
SHC3-201ENST00000375831 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
SHC3-201ENST00000375831 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
SHC3-201ENST00000375831 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
SHC3-201ENST00000375831 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
SHC3-201ENST00000375831 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
SHC3-201ENST00000375831 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
SHC3-201ENST00000375831 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
SHC3-201ENST00000375831 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
SHC3-201ENST00000375831 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
SHC3-201ENST00000375831 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
SHC3-201ENST00000375831 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
SHC3-201ENST00000375831 CYB5RLQ6IPT4 315 aa19.53■□□□□ 0.72
SHC3-201ENST00000375831 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.71
SHC3-201ENST00000375831 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
SHC3-201ENST00000375831 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
SHC3-201ENST00000375831 CHD1O14646 1710 aa19.48■□□□□ 0.71
SHC3-201ENST00000375831 POLA1P09884 1462 aaPredicted RBP19.43■□□□□ 0.7
SHC3-201ENST00000375831 RAD54L2Q9Y4B4 1467 aa19.36■□□□□ 0.69
SHC3-201ENST00000375831 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
SHC3-201ENST00000375831 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
SHC3-201ENST00000375831 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
SHC3-201ENST00000375831 FBLN2P98095 1184 aa19.3■□□□□ 0.68
SHC3-201ENST00000375831 SOGA1O94964 1423 aa19.28■□□□□ 0.68
SHC3-201ENST00000375831 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
SHC3-201ENST00000375831 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
SHC3-201ENST00000375831 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
SHC3-201ENST00000375831 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
SHC3-201ENST00000375831 CUX1P39880 1505 aa19.19■□□□□ 0.66
SHC3-201ENST00000375831 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
SHC3-201ENST00000375831 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
SHC3-201ENST00000375831 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
SHC3-201ENST00000375831 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
SHC3-201ENST00000375831 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
SHC3-201ENST00000375831 ERCC6L2Q5T890 1561 aa19.03■□□□□ 0.64
SHC3-201ENST00000375831 PBRM1Q86U86 1689 aa19.02■□□□□ 0.64
SHC3-201ENST00000375831 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
SHC3-201ENST00000375831 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
SHC3-201ENST00000375831 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
SHC3-201ENST00000375831 NUP160Q12769 1436 aa18.94■□□□□ 0.62
SHC3-201ENST00000375831 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
SHC3-201ENST00000375831 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
SHC3-201ENST00000375831 SHROOM2Q13796 1616 aa18.89■□□□□ 0.62
SHC3-201ENST00000375831 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
SHC3-201ENST00000375831 KIF13AQ9H1H9 1805 aa18.8■□□□□ 0.6
SHC3-201ENST00000375831 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
SHC3-201ENST00000375831 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
SHC3-201ENST00000375831 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
SHC3-201ENST00000375831 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
SHC3-201ENST00000375831 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
SHC3-201ENST00000375831 PRG4Q92954 1404 aaPredicted RBP18.72■□□□□ 0.59
SHC3-201ENST00000375831 ABCC10Q5T3U5 1492 aa18.68■□□□□ 0.58
SHC3-201ENST00000375831 JPH4Q96JJ6 628 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms