RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
HLA-DRA-201ENST00000374982 ABCC9O60706 1549 aa25.23■■□□□ 1.63
HLA-DRA-201ENST00000374982 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
HLA-DRA-201ENST00000374982 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
HLA-DRA-201ENST00000374982 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
HLA-DRA-201ENST00000374982 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
HLA-DRA-201ENST00000374982 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
HLA-DRA-201ENST00000374982 NACADO15069 1562 aa23.19■■□□□ 1.3
HLA-DRA-201ENST00000374982 DNAJC5Q9H3Z4 198 aa23.16■■□□□ 1.3
HLA-DRA-201ENST00000374982 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
HLA-DRA-201ENST00000374982 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
HLA-DRA-201ENST00000374982 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
HLA-DRA-201ENST00000374982 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
HLA-DRA-201ENST00000374982 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
HLA-DRA-201ENST00000374982 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
HLA-DRA-201ENST00000374982 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
HLA-DRA-201ENST00000374982 CUX2O14529 1486 aa22.13■■□□□ 1.13
HLA-DRA-201ENST00000374982 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
HLA-DRA-201ENST00000374982 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
HLA-DRA-201ENST00000374982 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
HLA-DRA-201ENST00000374982 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
HLA-DRA-201ENST00000374982 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
HLA-DRA-201ENST00000374982 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
HLA-DRA-201ENST00000374982 NESP48681 1621 aa21.42■■□□□ 1.02
HLA-DRA-201ENST00000374982 NCAPD3P42695 1498 aa21.39■■□□□ 1.02
HLA-DRA-201ENST00000374982 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
HLA-DRA-201ENST00000374982 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
HLA-DRA-201ENST00000374982 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
HLA-DRA-201ENST00000374982 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
HLA-DRA-201ENST00000374982 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
HLA-DRA-201ENST00000374982 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
HLA-DRA-201ENST00000374982 SMARCA4P51532 1647 aa21■□□□□ 0.95
HLA-DRA-201ENST00000374982 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.95
HLA-DRA-201ENST00000374982 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.94
HLA-DRA-201ENST00000374982 WDR62O43379 1518 aa20.88■□□□□ 0.93
HLA-DRA-201ENST00000374982 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
HLA-DRA-201ENST00000374982 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
HLA-DRA-201ENST00000374982 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
HLA-DRA-201ENST00000374982 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
HLA-DRA-201ENST00000374982 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
HLA-DRA-201ENST00000374982 PEG3Q9GZU2 1588 aa20.78■□□□□ 0.92
HLA-DRA-201ENST00000374982 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
HLA-DRA-201ENST00000374982 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
HLA-DRA-201ENST00000374982 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
HLA-DRA-201ENST00000374982 CEP164Q9UPV0 1460 aa20.61■□□□□ 0.89
HLA-DRA-201ENST00000374982 TRHP20396 242 aaPredicted RBP20.57■□□□□ 0.88
HLA-DRA-201ENST00000374982 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
HLA-DRA-201ENST00000374982 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
HLA-DRA-201ENST00000374982 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
HLA-DRA-201ENST00000374982 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
HLA-DRA-201ENST00000374982 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
HLA-DRA-201ENST00000374982 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
HLA-DRA-201ENST00000374982 CFTRP13569 1480 aa20.26■□□□□ 0.83
HLA-DRA-201ENST00000374982 CHD1O14646 1710 aa20.26■□□□□ 0.83
HLA-DRA-201ENST00000374982 WIZO95785 1651 aa20.26■□□□□ 0.83
HLA-DRA-201ENST00000374982 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
HLA-DRA-201ENST00000374982 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
HLA-DRA-201ENST00000374982 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
HLA-DRA-201ENST00000374982 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
HLA-DRA-201ENST00000374982 TOPBP1Q92547 1522 aa20.01■□□□□ 0.79
HLA-DRA-201ENST00000374982 FBLN2P98095 1184 aa19.99■□□□□ 0.79
HLA-DRA-201ENST00000374982 ILDR1Q86SU0 546 aaPredicted RBP19.97■□□□□ 0.79
HLA-DRA-201ENST00000374982 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.79
HLA-DRA-201ENST00000374982 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
HLA-DRA-201ENST00000374982 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
HLA-DRA-201ENST00000374982 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
HLA-DRA-201ENST00000374982 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
HLA-DRA-201ENST00000374982 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
HLA-DRA-201ENST00000374982 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
HLA-DRA-201ENST00000374982 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
HLA-DRA-201ENST00000374982 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
HLA-DRA-201ENST00000374982 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
HLA-DRA-201ENST00000374982 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
HLA-DRA-201ENST00000374982 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
HLA-DRA-201ENST00000374982 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
HLA-DRA-201ENST00000374982 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
HLA-DRA-201ENST00000374982 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
HLA-DRA-201ENST00000374982 MAGI1Q96QZ7 1491 aaPredicted RBP19.65■□□□□ 0.74
HLA-DRA-201ENST00000374982 WDR97A6NE52 1622 aa19.64■□□□□ 0.73
HLA-DRA-201ENST00000374982 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
HLA-DRA-201ENST00000374982 SOGA1O94964 1423 aa19.59■□□□□ 0.73
HLA-DRA-201ENST00000374982 ERCC6L2Q5T890 1561 aa19.58■□□□□ 0.73
HLA-DRA-201ENST00000374982 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
HLA-DRA-201ENST00000374982 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
HLA-DRA-201ENST00000374982 PBRM1Q86U86 1689 aa19.52■□□□□ 0.71
HLA-DRA-201ENST00000374982 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
HLA-DRA-201ENST00000374982 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
HLA-DRA-201ENST00000374982 KDM6BO15054 1643 aa19.42■□□□□ 0.7
HLA-DRA-201ENST00000374982 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
HLA-DRA-201ENST00000374982 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
HLA-DRA-201ENST00000374982 FAM69CQ0P6D2 419 aa19.33■□□□□ 0.68
HLA-DRA-201ENST00000374982 DIP2BQ9P265 1576 aa19.32■□□□□ 0.68
HLA-DRA-201ENST00000374982 CUX1P39880 1505 aa19.32■□□□□ 0.68
HLA-DRA-201ENST00000374982 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
HLA-DRA-201ENST00000374982 HECW2Q9P2P5 1572 aa19.32■□□□□ 0.68
HLA-DRA-201ENST00000374982 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
HLA-DRA-201ENST00000374982 TSPOAP1O95153 1857 aa19.28■□□□□ 0.68
HLA-DRA-201ENST00000374982 NUP160Q12769 1436 aa19.27■□□□□ 0.68
HLA-DRA-201ENST00000374982 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
HLA-DRA-201ENST00000374982 ADGRL1O94910 1474 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms