RNA–Protein interactions for RNA: ENST00000374967.6

CERKL-202, Transcript of ceramide kinase like, humanhuman

TSL 1 (best)

Gene CERKL, Length 1,535 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-202ENST00000374967 NISCHQ9Y2I1 1504 aa43.1■■■■■ 4.49
CERKL-202ENST00000374967 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
CERKL-202ENST00000374967 ABCC9O60706 1549 aa37.32■■■■□ 3.56
CERKL-202ENST00000374967 ZCCHC6Q5VYS8 1495 aaKnown RBP35.96■■■■□ 3.35
CERKL-202ENST00000374967 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
CERKL-202ENST00000374967 DCAF8L2P0C7V8 631 aa35.87■■■■□ 3.33
CERKL-202ENST00000374967 NACADO15069 1562 aa35.86■■■■□ 3.33
CERKL-202ENST00000374967 MYO15BQ96JP2 1530 aa35.64■■■■□ 3.3
CERKL-202ENST00000374967 DCAF1Q9Y4B6 1507 aa35.59■■■■□ 3.29
CERKL-202ENST00000374967 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
CERKL-202ENST00000374967 SCRIBQ14160 1630 aa35.05■■■■□ 3.2
CERKL-202ENST00000374967 BICRAQ9NZM4 1560 aa34.96■■■■□ 3.19
CERKL-202ENST00000374967 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
CERKL-202ENST00000374967 SHROOM4Q9ULL8 1493 aa34.32■■■■□ 3.08
CERKL-202ENST00000374967 DNAJC5BQ9UF47 199 aa34.13■■■■□ 3.05
CERKL-202ENST00000374967 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
CERKL-202ENST00000374967 CC2D2AQ9P2K1 1620 aa33.81■■■■□ 3
CERKL-202ENST00000374967 CECR2Q9BXF3 1484 aa33.65■■■□□ 2.98
CERKL-202ENST00000374967 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
CERKL-202ENST00000374967 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
CERKL-202ENST00000374967 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
CERKL-202ENST00000374967 ATAD2BQ9ULI0 1458 aa33.17■■■□□ 2.9
CERKL-202ENST00000374967 SMARCA2P51531 1590 aa33.1■■■□□ 2.89
CERKL-202ENST00000374967 PEG3Q9GZU2 1588 aa33.09■■■□□ 2.89
CERKL-202ENST00000374967 NCAPD3P42695 1498 aa33.06■■■□□ 2.88
CERKL-202ENST00000374967 WIZO95785 1651 aa33.04■■■□□ 2.88
CERKL-202ENST00000374967 HMGXB3Q12766 1538 aa32.98■■■□□ 2.87
CERKL-202ENST00000374967 BAZ1BQ9UIG0 1483 aaKnown RBP32.9■■■□□ 2.86
CERKL-202ENST00000374967 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
CERKL-202ENST00000374967 TOP2AP11388 1531 aaKnown RBP32.56■■■□□ 2.8
CERKL-202ENST00000374967 NESP48681 1621 aa32.41■■■□□ 2.78
CERKL-202ENST00000374967 LAMC3Q9Y6N6 1575 aa32.22■■■□□ 2.75
CERKL-202ENST00000374967 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
CERKL-202ENST00000374967 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
CERKL-202ENST00000374967 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
CERKL-202ENST00000374967 CADPSQ9ULU8 1353 aa32.09■■■□□ 2.73
CERKL-202ENST00000374967 ERCC6Q03468 1493 aa32.05■■■□□ 2.72
CERKL-202ENST00000374967 PRDM2Q13029 1718 aa32■■■□□ 2.71
CERKL-202ENST00000374967 CFTRP13569 1480 aa31.99■■■□□ 2.71
CERKL-202ENST00000374967 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
CERKL-202ENST00000374967 PDS5BQ9NTI5 1447 aa31.88■■■□□ 2.69
CERKL-202ENST00000374967 FANCD2Q9BXW9 1451 aa31.8■■■□□ 2.68
CERKL-202ENST00000374967 CEP164Q9UPV0 1460 aa31.73■■■□□ 2.67
CERKL-202ENST00000374967 MRC2Q9UBG0 1479 aa31.65■■■□□ 2.66
CERKL-202ENST00000374967 CUX2O14529 1486 aa31.62■■■□□ 2.65
CERKL-202ENST00000374967 WDR62O43379 1518 aa31.6■■■□□ 2.65
CERKL-202ENST00000374967 URB2Q14146 1524 aaKnown RBP31.55■■■□□ 2.64
CERKL-202ENST00000374967 TOPBP1Q92547 1522 aa31.35■■■□□ 2.61
CERKL-202ENST00000374967 DNMBPQ6XZF7 1577 aa31.32■■■□□ 2.6
CERKL-202ENST00000374967 CUX1P39880 1505 aa31.23■■■□□ 2.59
CERKL-202ENST00000374967 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
CERKL-202ENST00000374967 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
CERKL-202ENST00000374967 TARBP1Q13395 1621 aaKnown RBP31.07■■■□□ 2.56
CERKL-202ENST00000374967 SYNJ1O43426 1573 aa31.07■■■□□ 2.56
CERKL-202ENST00000374967 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
CERKL-202ENST00000374967 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
CERKL-202ENST00000374967 IFT140Q96RY7 1462 aa31.02■■■□□ 2.56
CERKL-202ENST00000374967 ZNF608Q9ULD9 1512 aaPredicted RBP31.01■■■□□ 2.56
CERKL-202ENST00000374967 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
CERKL-202ENST00000374967 TOP2BQ02880 1626 aa30.98■■■□□ 2.55
CERKL-202ENST00000374967 WRNQ14191 1432 aaPredicted RBP eCLIP30.97■■■□□ 2.55
CERKL-202ENST00000374967 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
CERKL-202ENST00000374967 WDR97A6NE52 1622 aa30.93■■■□□ 2.54
CERKL-202ENST00000374967 SOGA1O94964 1423 aa30.88■■■□□ 2.53
CERKL-202ENST00000374967 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.52
CERKL-202ENST00000374967 TDRD9Q8NDG6 1382 aaKnown RBP30.74■■■□□ 2.51
CERKL-202ENST00000374967 ABCA10Q8WWZ4 1543 aa30.71■■■□□ 2.51
CERKL-202ENST00000374967 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
CERKL-202ENST00000374967 ABCA5Q8WWZ7 1642 aa30.69■■■□□ 2.5
CERKL-202ENST00000374967 CHD1O14646 1710 aa30.61■■■□□ 2.49
CERKL-202ENST00000374967 GAPVD1Q14C86 1478 aa30.56■■■□□ 2.48
CERKL-202ENST00000374967 SNAPC4Q5SXM2 1469 aa30.53■■■□□ 2.48
CERKL-202ENST00000374967 GRIN2BQ13224 1484 aa30.51■■■□□ 2.47
CERKL-202ENST00000374967 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
CERKL-202ENST00000374967 MAGI1Q96QZ7 1491 aaPredicted RBP30.4■■■□□ 2.46
CERKL-202ENST00000374967 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
CERKL-202ENST00000374967 ERICH3Q5RHP9 1530 aa30.33■■■□□ 2.45
CERKL-202ENST00000374967 FBLN2P98095 1184 aa30.31■■■□□ 2.44
CERKL-202ENST00000374967 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
CERKL-202ENST00000374967 SYNJ2O15056 1496 aa30.3■■■□□ 2.44
CERKL-202ENST00000374967 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
CERKL-202ENST00000374967 RUSC2Q8N2Y8 1516 aa30.26■■■□□ 2.43
CERKL-202ENST00000374967 KIF27Q86VH2 1401 aa30.25■■■□□ 2.43
CERKL-202ENST00000374967 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
CERKL-202ENST00000374967 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
CERKL-202ENST00000374967 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
CERKL-202ENST00000374967 GRIN2AQ12879 1464 aa30.17■■■□□ 2.42
CERKL-202ENST00000374967 CUL7Q14999 1698 aa30.15■■■□□ 2.42
CERKL-202ENST00000374967 IGF1RP08069 1367 aa30.15■■■□□ 2.42
CERKL-202ENST00000374967 CLASP1Q7Z460 1538 aa30.13■■■□□ 2.41
CERKL-202ENST00000374967 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
CERKL-202ENST00000374967 RIMBP3CA6NJZ7 1639 aa30.03■■■□□ 2.4
CERKL-202ENST00000374967 RIMBP3BA6NNM3 1639 aa30.03■■■□□ 2.4
CERKL-202ENST00000374967 RIMBP3Q9UFD9 1639 aa30.03■■■□□ 2.4
CERKL-202ENST00000374967 NUP160Q12769 1436 aa30■■■□□ 2.39
CERKL-202ENST00000374967 ARHGEF11O15085 1522 aa29.96■■■□□ 2.39
CERKL-202ENST00000374967 CARMIL1Q5VZK9 1371 aa29.96■■■□□ 2.39
CERKL-202ENST00000374967 SHROOM2Q13796 1616 aa29.87■■■□□ 2.37
CERKL-202ENST00000374967 ERCC6L2Q5T890 1561 aa29.85■■■□□ 2.37
CERKL-202ENST00000374967 RAPGEF2Q9Y4G8 1499 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms