RNA–Protein interactions for RNA: ENST00000374886.7

MSANTD3-202, Transcript of Myb/SANT DNA binding domain containing 3, humanhuman

TSL 3

Gene MSANTD3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-202ENST00000374886 NISCHQ9Y2I1 1504 aa71.8■■■■■ 9.08
MSANTD3-202ENST00000374886 ABCC9O60706 1549 aa64.67■■■■■ 7.94
MSANTD3-202ENST00000374886 CCDC180Q9P1Z9 1646 aa64.62■■■■■ 7.94
MSANTD3-202ENST00000374886 RB1CC1Q8TDY2 1594 aa61.56■■■■■ 7.44
MSANTD3-202ENST00000374886 NACADO15069 1562 aa61.08■■■■■ 7.37
MSANTD3-202ENST00000374886 DNAJC5BQ9UF47 199 aa60.71■■■■■ 7.31
MSANTD3-202ENST00000374886 DCAF8L2P0C7V8 631 aa60.6■■■■■ 7.29
MSANTD3-202ENST00000374886 UNC13AQ9UPW8 1703 aa60.23■■■■■ 7.23
MSANTD3-202ENST00000374886 MYO15BQ96JP2 1530 aa60.17■■■■■ 7.22
MSANTD3-202ENST00000374886 PABPN1Q86U42 306 aaKnown RBP eCLIP60.11■■■■■ 7.21
MSANTD3-202ENST00000374886 BICRAQ9NZM4 1560 aa59.72■■■■■ 7.15
MSANTD3-202ENST00000374886 ZCCHC6Q5VYS8 1495 aaKnown RBP59.48■■■■■ 7.11
MSANTD3-202ENST00000374886 DCAF1Q9Y4B6 1507 aa59.33■■■■■ 7.09
MSANTD3-202ENST00000374886 SHROOM4Q9ULL8 1493 aa58.96■■■■■ 7.03
MSANTD3-202ENST00000374886 SCRIBQ14160 1630 aa58.81■■■■■ 7
MSANTD3-202ENST00000374886 CC2D2AQ9P2K1 1620 aa58.46■■■■■ 6.95
MSANTD3-202ENST00000374886 CECR2Q9BXF3 1484 aa58.29■■■■■ 6.92
MSANTD3-202ENST00000374886 EIF4G1Q04637 1599 aaKnown RBP58.29■■■■■ 6.92
MSANTD3-202ENST00000374886 NCAPD3P42695 1498 aa56.33■■■■■ 6.61
MSANTD3-202ENST00000374886 ATAD2BQ9ULI0 1458 aa56.13■■■■■ 6.58
MSANTD3-202ENST00000374886 SMARCA4P51532 1647 aa56.09■■■■■ 6.57
MSANTD3-202ENST00000374886 SMARCA2P51531 1590 aa56.04■■■■■ 6.56
MSANTD3-202ENST00000374886 HMGXB3Q12766 1538 aa55.96■■■■■ 6.55
MSANTD3-202ENST00000374886 DNAJC5Q9H3Z4 198 aa55.94■■■■■ 6.55
MSANTD3-202ENST00000374886 ERCC6Q03468 1493 aa55.89■■■■■ 6.54
MSANTD3-202ENST00000374886 CUX2O14529 1486 aa55.86■■■■■ 6.53
MSANTD3-202ENST00000374886 BAZ1AQ9NRL2 1556 aaPredicted RBP55.78■■■■■ 6.52
MSANTD3-202ENST00000374886 BAZ1BQ9UIG0 1483 aaKnown RBP55.62■■■■■ 6.5
MSANTD3-202ENST00000374886 PEG3Q9GZU2 1588 aa55.54■■■■■ 6.48
MSANTD3-202ENST00000374886 NESP48681 1621 aa55.5■■■■■ 6.47
MSANTD3-202ENST00000374886 MROH2BQ7Z745 1585 aa55.31■■■■■ 6.44
MSANTD3-202ENST00000374886 LAMC3Q9Y6N6 1575 aa55.16■■■■■ 6.42
MSANTD3-202ENST00000374886 THOC2Q8NI27 1593 aaKnown RBP55.05■■■■■ 6.4
MSANTD3-202ENST00000374886 KIF21AQ7Z4S6 1674 aa54.88■■■■■ 6.38
MSANTD3-202ENST00000374886 PDS5BQ9NTI5 1447 aa54.8■■■■■ 6.36
MSANTD3-202ENST00000374886 WIZO95785 1651 aa54.68■■■■■ 6.34
MSANTD3-202ENST00000374886 CADPSQ9ULU8 1353 aa54.6■■■■■ 6.33
MSANTD3-202ENST00000374886 MRC2Q9UBG0 1479 aa54.35■■■■■ 6.29
MSANTD3-202ENST00000374886 WDR62O43379 1518 aa54.24■■■■■ 6.27
MSANTD3-202ENST00000374886 CEP164Q9UPV0 1460 aa54.11■■■■■ 6.25
MSANTD3-202ENST00000374886 RSF1Q96T23 1441 aaPredicted RBP54.07■■■■■ 6.25
MSANTD3-202ENST00000374886 FANCD2Q9BXW9 1451 aa54.01■■■■■ 6.24
MSANTD3-202ENST00000374886 TOP2AP11388 1531 aaKnown RBP53.98■■■■■ 6.23
MSANTD3-202ENST00000374886 CFTRP13569 1480 aa53.96■■■■■ 6.23
MSANTD3-202ENST00000374886 PRDM2Q13029 1718 aa53.59■■■■■ 6.17
MSANTD3-202ENST00000374886 URB2Q14146 1524 aaKnown RBP53.57■■■■■ 6.17
MSANTD3-202ENST00000374886 TRIM41Q8WV44 630 aa53.42■■■■■ 6.14
MSANTD3-202ENST00000374886 CCDC88BA6NC98 1476 aa53.32■■■■■ 6.13
MSANTD3-202ENST00000374886 OSCARQ8IYS5 282 aa53.21■■■■■ 6.11
MSANTD3-202ENST00000374886 IFT140Q96RY7 1462 aa53.02■■■■■ 6.08
MSANTD3-202ENST00000374886 TOPBP1Q92547 1522 aa52.98■■■■■ 6.07
MSANTD3-202ENST00000374886 ZNF608Q9ULD9 1512 aaPredicted RBP52.92■■■■■ 6.06
MSANTD3-202ENST00000374886 ABCC8Q09428 1581 aa52.89■■■■■ 6.06
MSANTD3-202ENST00000374886 DNMBPQ6XZF7 1577 aa52.81■■■■■ 6.04
MSANTD3-202ENST00000374886 EIF4G3O43432 1585 aaKnown RBP52.7■■■■■ 6.03
MSANTD3-202ENST00000374886 RIMBP3CA6NJZ7 1639 aa52.62■■■■■ 6.01
MSANTD3-202ENST00000374886 RIMBP3BA6NNM3 1639 aa52.62■■■■■ 6.01
MSANTD3-202ENST00000374886 RIMBP3Q9UFD9 1639 aa52.62■■■■■ 6.01
MSANTD3-202ENST00000374886 TARBP1Q13395 1621 aaKnown RBP52.54■■■■■ 6
MSANTD3-202ENST00000374886 POLA1P09884 1462 aaPredicted RBP52.42■■■■■ 5.98
MSANTD3-202ENST00000374886 ARHGEF11O15085 1522 aa52.41■■■■■ 5.98
MSANTD3-202ENST00000374886 AQRO60306 1485 aaKnown RBP eCLIP52.4■■■■■ 5.982e-6■■■□□ 18.3
MSANTD3-202ENST00000374886 CHD1O14646 1710 aa52.38■■■■■ 5.98
MSANTD3-202ENST00000374886 RAD54L2Q9Y4B4 1467 aa52.19■■■■■ 5.95
MSANTD3-202ENST00000374886 SOGA1O94964 1423 aa52.15■■■■■ 5.94
MSANTD3-202ENST00000374886 FBLN2P98095 1184 aa52.1■■■■■ 5.93
MSANTD3-202ENST00000374886 FGD5Q6ZNL6 1462 aa52.06■■■■■ 5.92
MSANTD3-202ENST00000374886 WDR97A6NE52 1622 aa52.05■■■■■ 5.92
MSANTD3-202ENST00000374886 TDRD9Q8NDG6 1382 aaKnown RBP52.05■■■■■ 5.92
MSANTD3-202ENST00000374886 CUX1P39880 1505 aa51.99■■■■■ 5.91
MSANTD3-202ENST00000374886 CYB5RLQ6IPT4 315 aa51.97■■■■■ 5.91
MSANTD3-202ENST00000374886 SNAPC4Q5SXM2 1469 aa51.91■■■■■ 5.9
MSANTD3-202ENST00000374886 ARAP1Q96P48 1450 aa51.86■■■■■ 5.89
MSANTD3-202ENST00000374886 MAGI1Q96QZ7 1491 aaPredicted RBP51.8■■■■■ 5.88
MSANTD3-202ENST00000374886 GRIN2BQ13224 1484 aa51.75■■■■■ 5.88
MSANTD3-202ENST00000374886 CLASP1Q7Z460 1538 aa51.71■■■■■ 5.87
MSANTD3-202ENST00000374886 SYNJ1O43426 1573 aa51.7■■■■■ 5.87
MSANTD3-202ENST00000374886 CHMP7Q8WUX9 453 aaPredicted RBP51.7■■■■■ 5.87
MSANTD3-202ENST00000374886 PBRM1Q86U86 1689 aa51.63■■■■■ 5.86
MSANTD3-202ENST00000374886 SYNJ2O15056 1496 aa51.61■■■■■ 5.85
MSANTD3-202ENST00000374886 GAPVD1Q14C86 1478 aa51.54■■■■■ 5.84
MSANTD3-202ENST00000374886 SUPT5HO00267 1087 aaKnown RBP51.52■■■■■ 5.84
MSANTD3-202ENST00000374886 ABCA10Q8WWZ4 1543 aa51.48■■■■■ 5.83
MSANTD3-202ENST00000374886 TRHP20396 242 aaPredicted RBP51.47■■■■■ 5.83
MSANTD3-202ENST00000374886 ABCA5Q8WWZ7 1642 aa51.46■■■■■ 5.83
MSANTD3-202ENST00000374886 WRNQ14191 1432 aaPredicted RBP eCLIP51.22■■■■■ 5.79
MSANTD3-202ENST00000374886 BIVM-ERCC5R4GMW8 1640 aa51.18■■■■■ 5.78
MSANTD3-202ENST00000374886 TOP2BQ02880 1626 aa51.15■■■■■ 5.78
MSANTD3-202ENST00000374886 GRIN2AQ12879 1464 aa51.09■■■■■ 5.77
MSANTD3-202ENST00000374886 ADAMTS12P58397 1594 aa51.08■■■■■ 5.77
MSANTD3-202ENST00000374886 CEP170Q5SW79 1584 aa50.93■■■■■ 5.74
MSANTD3-202ENST00000374886 NUP160Q12769 1436 aa50.91■■■■■ 5.74
MSANTD3-202ENST00000374886 FHAD1B1AJZ9 1412 aa50.87■■■■■ 5.73
MSANTD3-202ENST00000374886 ERCC6L2Q5T890 1561 aa50.85■■■■■ 5.73
MSANTD3-202ENST00000374886 ERICH3Q5RHP9 1530 aa50.85■■■■■ 5.73
MSANTD3-202ENST00000374886 SHROOM2Q13796 1616 aa50.76■■■■■ 5.72
MSANTD3-202ENST00000374886 PRG4Q92954 1404 aaPredicted RBP50.42■■■■■ 5.66
MSANTD3-202ENST00000374886 RUSC2Q8N2Y8 1516 aa50.36■■■■■ 5.65
MSANTD3-202ENST00000374886 JPH4Q96JJ6 628 aa50.34■■■■■ 5.65
MSANTD3-202ENST00000374886 KIF13AQ9H1H9 1805 aa50.2■■■■■ 5.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms